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1N7B
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BU of 1n7b by Molmil
RIP-Radiation-damage Induced Phasing
Descriptor: POTASSIUM ION, RNA/DNA (5'-R(*U)-D(P*(BGM))-R(P*AP*GP*GP*U)-3'), SPERMINE
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-13
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
1N6X
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BU of 1n6x by Molmil
RIP-phasing on Bovine Trypsin
Descriptor: BENZYLAMINE, CALCIUM ION, GLYCEROL, ...
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-12
Release date:2003-03-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
1N6Y
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BU of 1n6y by Molmil
RIP-phasing on Bovine Trypsin
Descriptor: BENZYLAMINE, CALCIUM ION, GLYCEROL, ...
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-12
Release date:2003-03-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
1N7A
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BU of 1n7a by Molmil
RIP-Radiation-damage Induced Phasing
Descriptor: POTASSIUM ION, RNA/DNA (5'-R(*U)-D(P*(BGM))-R(P*AP*GP*GP*U)-3'), SPERMINE
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-13
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
8AEY
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BU of 8aey by Molmil
3 A CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS FERRITIN FROM TIMEPIX3 detector
Descriptor: Ferritin BfrB
Authors:Zhang, Y, van Schayck, J.P, Knoops, K, Peters, P.J, Ravelli, R.B.G.
Deposit date:2022-07-14
Release date:2023-01-18
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Integration of an Event-driven Timepix3 Hybrid Pixel Detector into a Cryo-EM Workflow
Microsc Microanal, 2023
8AKO
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BU of 8ako by Molmil
Structure of EspB-EspK complex: the non-identical twin of the PE-PPE-EspG secretion mechanism.
Descriptor: ESX-1 secretion-associated protein EspB, ESX-1 secretion-associated protein EspK
Authors:Gijsbers, A, Eymery, M, Menart, I, Vinciauskaite, V, Gao, Y, Siliqi, D, Peters, P, Mccarthy, A, Ravelli, R.B.G.
Deposit date:2022-07-30
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:The crystal structure of the EspB-EspK virulence factor-chaperone complex suggests an additional type VII secretion mechanism in Mycobacterium tuberculosis.
J.Biol.Chem., 299, 2022
6Y1A
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BU of 6y1a by Molmil
Amyloid fibril structure of islet amyloid polypeptide
Descriptor: AMINO GROUP, Islet amyloid polypeptide
Authors:Roeder, C, Kupreichyk, T, Gremer, L, Schaefer, L.U, Pothula, K.R, Ravelli, R.B.G, Willbold, D, Hoyer, W, Schroder, G.F.
Deposit date:2020-02-11
Release date:2020-03-04
Last modified:2020-07-22
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of islet amyloid polypeptide fibrils reveals similarities with amyloid-beta fibrils.
Nat.Struct.Mol.Biol., 27, 2020
5M3L
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BU of 5m3l by Molmil
Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris hemoglobin
Descriptor: Extracellular globin-2, Extracellular globin-3, Extracellular globin-4, ...
Authors:Afanasyev, P, Linnemayr-Seer, C, Ravelli, R.B.G, Matadeen, R, De Carlo, S, Alewijnse, B, Portugal, R.V, Pannu, N.S, Schatz, M, van Heel, M.
Deposit date:2016-10-15
Release date:2017-09-13
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris haemoglobin.
IUCrJ, 4, 2017
6R4R
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BU of 6r4r by Molmil
Cryo-EM Structure of the PI3-Kinase SH3 Domain Amyloid Fibril
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha
Authors:Roeder, C, Vettore, N, Mangels, L.N, Gremer, L, Ravelli, R.B.G, Willbold, D, Hoyer, W, Buell, A.K, Schroder, G.F.
Deposit date:2019-03-23
Release date:2019-08-28
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Atomic structure of PI3-kinase SH3 amyloid fibrils by cryo-electron microscopy.
Nat Commun, 10, 2019
2GTT
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BU of 2gtt by Molmil
Crystal structure of the rabies virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
Authors:Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H.
Deposit date:2006-04-28
Release date:2006-09-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Crystal Structure of the Rabies Virus Nucleoprotein-RNA Complex
Science, 313, 2006
7O6E
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BU of 7o6e by Molmil
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
Descriptor: Ferritin BfrB
Authors:Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-04-10
Release date:2021-05-19
Last modified:2021-09-15
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021
7P13
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BU of 7p13 by Molmil
2.29 A Mycobacterium tuberculosis EspB.
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Gijsbers, A, Zhang, Y, Vinciauskaite, V, Siroy, A, Gao, Y, Tria, G, Mathew, A, Sanchez-Puig, N, Lopez-Iglesias, C, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-07-01
Release date:2021-08-18
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Priming mycobacterial ESX-secreted protein B to form a channel-like structure.
Curr Res Struct Biol, 3, 2021
7P0Z
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BU of 7p0z by Molmil
2.43 A Mycobacterium marinum EspB.
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Gijsbers, A, Zhang, Y, Vinciauskaite, V, Siroy, A, Ye, G, Tria, G, Mathew, A, Sanchez-Puig, N, Lopez-Iglesias, C, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-07-01
Release date:2021-08-18
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Priming mycobacterial ESX-secreted protein B to form a channel-like structure.
Curr Res Struct Biol, 3, 2021
7P1T
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BU of 7p1t by Molmil
Cryo-EM structure of encapsulin from Mycobacterium tuberculosis
Descriptor: 29 kDa antigen, Cfp29
Authors:Lewis, C.J, Berger, C, Ravelli, R.B.G.
Deposit date:2021-07-02
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Encapsulins in mycobacteria: from single particle to in situ
To Be Published
1UWN
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BU of 1uwn by Molmil
The Initial Events in the Photocycle of Photoactive Yellow Protein: A Common Mechanism on Light Activation in Photoreceptor Proteins
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
Authors:Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
Deposit date:2004-02-10
Release date:2004-03-25
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
1UWP
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BU of 1uwp by Molmil
Initial Events in the Photocycle of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
Authors:Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
Deposit date:2004-02-11
Release date:2006-05-10
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
1V04
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BU of 1v04 by Molmil
serum paraoxonase by directed evolution
Descriptor: CALCIUM ION, PHOSPHATE ION, SERUM PARAOXONASE/ARYLESTERASE 1
Authors:Harel, M, Aharoni, A, Gaidukov, L, Brumshtein, B, Khersonsky, O, Yagur, S, Meged, R, Dvir, H, Ravelli, R.B.G, McCarthy, A, Toker, L, Silman, I, Sussman, J.L, Tawfik, D.S.
Deposit date:2004-03-22
Release date:2004-04-23
Last modified:2017-03-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Evolution of the Serum Paraoxonase Family of Detoxifying and Anti-Atherosclerotic Enzymes
Nat.Struct.Mol.Biol., 11, 2004
3HKB
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BU of 3hkb by Molmil
Tubulin: RB3 Stathmin-like domain complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Dorleans, A, Gigant, B, Ravelli, R.B.G, Mailliet, P, Mikol, V, Knossow, M.
Deposit date:2009-05-23
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Variations in the colchicine-binding domain provide insight into the structural switch of tubulin
Proc.Natl.Acad.Sci.USA, 106, 2009
3HKC
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BU of 3hkc by Molmil
Tubulin-ABT751: RB3 stathmin-like domain complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Dorleans, A, Gigant, B, Ravelli, R.B.G, Mailliet, P, Mikol, V, Knossow, M.
Deposit date:2009-05-23
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Variations in the colchicine-binding domain provide insight into the structural switch of tubulin
Proc.Natl.Acad.Sci.USA, 106, 2009
3HKE
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BU of 3hke by Molmil
Tubulin-T138067: RB3 stathmin-like domain complex
Descriptor: 2,3,4,5,6-pentafluoro-N-(3-fluoro-4-methoxyphenyl)benzenesulfonamide, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Dorleans, A, Gigant, B, Ravelli, R.B.G, Mailliet, P, Mikol, V, Knossow, M.
Deposit date:2009-05-23
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Variations in the colchicine-binding domain provide insight into the structural switch of tubulin
Proc.Natl.Acad.Sci.USA, 106, 2009
3HKD
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BU of 3hkd by Molmil
Tubulin-TN16 : RB3 stathmin-like domain complex
Descriptor: (3Z,5S)-5-benzyl-3-[1-(phenylamino)ethylidene]pyrrolidine-2,4-dione, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Dorleans, A, Gigant, B, Ravelli, R.B.G, Mailliet, P, Mikol, V, Knossow, M.
Deposit date:2009-05-23
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Variations in the colchicine-binding domain provide insight into the structural switch of tubulin
Proc.Natl.Acad.Sci.USA, 106, 2009
2W9J
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BU of 2w9j by Molmil
The crystal structure of SRP14 from the Schizosaccharomyces pombe signal recognition particle
Descriptor: SIGNAL RECOGNITION PARTICLE SUBUNIT SRP14
Authors:Brooks, M.A, Ravelli, R.B.G, McCarthy, A.A, Strub, K, Cusack, S.
Deposit date:2009-01-25
Release date:2009-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Srp14 from the Schizosaccharomyces Pombe Signal Recognition Particle.
Acta Crystallogr.,Sect.D, 65, 2009
2W6G
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BU of 2w6g by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration: Hydration State 3.
Descriptor: ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT BETA, ...
Authors:Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
Deposit date:2008-12-18
Release date:2009-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (6 Å)
Cite:Improving Diffraction by Humidity Control: A Novel Device Compatible with X-Ray Beamlines.
Acta Crystallogr.,Sect.D, 65, 2009
2W6E
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BU of 2w6e by Molmil
Low resolution structures of bovine mitochondrial F1-ATPase during controlled dehydration:hydration state 1.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM, MITOCHONDRIAL, ...
Authors:Sanchez-Weatherby, J, Felisaz, F, Gobbo, A, Huet, J, Ravelli, R.B.G, Bowler, M.W, Cipriani, F.
Deposit date:2008-12-18
Release date:2009-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (6.5 Å)
Cite:Improving Diffraction by Humidity Control: A Novel Device Compatible with X-Ray Beamlines.
Acta Crystallogr.,Sect.D, 65, 2009
2BHX
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BU of 2bhx by Molmil
Radiation damage of the Schiff base in phosphoserine aminotransferase (structure A)
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C.
Deposit date:2005-01-20
Release date:2005-05-19
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage.
Protein Sci., 14, 2005

 

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