Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1YT5
DownloadVisualize
BU of 1yt5 by Molmil
Crystal structure of NAD kinase from Thermotoga maritima
Descriptor: SULFATE ION, inorganic polyphosphate/ATP-NAD kinase
Authors:Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-09
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a NAD kinase from Thermotoga maritima at 2.3 A resolution.
Acta Crystallogr.,Sect.F, 61, 2005
4D8M
DownloadVisualize
BU of 4d8m by Molmil
Crystal structure of Bacillus thuringiensis Cry5B nematocidal toxin
Descriptor: Pesticidal crystal protein cry5Ba
Authors:Fan, H, Hu, Y, Aroian, R.V, Ghosh, P, Berkeley Structural Genomics Center (BSGC)
Deposit date:2012-01-10
Release date:2012-12-19
Last modified:2013-02-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Glycolipid Binding Properties of the Nematicidal Protein Cry5B.
Biochemistry, 51, 2012
2MJP
DownloadVisualize
BU of 2mjp by Molmil
STRUCTURE-BASED IDENTIFICATION OF THE BIOCHEMICAL FUNCTION OF A HYPOTHETICAL PROTEIN FROM METHANOCOCCUS JANNASCHII:MJ0226
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PYROPHOSPHATASE
Authors:Hwang, K.Y, Chung, J.H, Han, Y.S, Kim, S.H, Cho, Y, Berkeley Structural Genomics Center (BSGC)
Deposit date:1999-01-27
Release date:2000-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based identification of a novel NTPase from Methanococcus jannaschii.
Nat.Struct.Biol., 6, 1999
1DUS
DownloadVisualize
BU of 1dus by Molmil
MJ0882-A hypothetical protein from M. jannaschii
Descriptor: MJ0882
Authors:Hung, L, Huang, L, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-01-18
Release date:2000-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based experimental confirmation of biochemical function to a methyltransferase, MJ0882, from hyperthermophile Methanococcus jannaschii
J.STRUCT.FUNCT.GENOM., 2, 2002
1EKE
DownloadVisualize
BU of 1eke by Molmil
CRYSTAL STRUCTURE OF CLASS II RIBONUCLEASE H (RNASE HII) WITH MES LIGAND
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, RIBONUCLEASE HII
Authors:Lai, L.H, Yokota, H, Hung, L.W, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-03-07
Release date:2000-09-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of archaeal RNase HII: a homologue of human major RNase H
Structure, 8, 2000
1F5S
DownloadVisualize
BU of 1f5s by Molmil
CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE FROM METHANOCOCCUS JANNASCHII
Descriptor: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOSERINE PHOSPHATASE (PSP)
Authors:Wang, W, Kim, R, Jancarik, J, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-06-15
Release date:2001-06-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of phosphoserine phosphatase from Methanococcus jannaschii, a hyperthermophile, at 1.8 A resolution.
Structure, 9, 2001
1FO5
DownloadVisualize
BU of 1fo5 by Molmil
SOLUTION STRUCTURE OF REDUCED MJ0307
Descriptor: THIOREDOXIN
Authors:Cave, J.W, Cho, H.S, Batchelder, A.M, Kim, R, Yokota, H, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-08-24
Release date:2001-04-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution nuclear magnetic resonance structure of a protein disulfide oxidoreductase from Methanococcus jannaschii.
Protein Sci., 10, 2001
1FBN
DownloadVisualize
BU of 1fbn by Molmil
CRYSTAL STRUCTURE OF A FIBRILLARIN HOMOLOGUE FROM METHANOCOCCUS JANNASCHII, A HYPERTHERMOPHILE, AT 1.6 A
Descriptor: MJ FIBRILLARIN HOMOLOGUE
Authors:Wang, H, Boisvert, D, Kim, K.K, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:1999-04-25
Release date:2000-04-26
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 A resolution.
EMBO J., 19, 2000
1G2I
DownloadVisualize
BU of 1g2i by Molmil
CRYSTAL STRUCTURE OF A NOVEL INTRACELLULAR PROTEASE FROM PYROCOCCUS HORIKOSHII AT 2 A RESOLUTION
Descriptor: PROTEASE I, SULFATE ION
Authors:Du, X, Choi, I.-G, Kim, R, Jancarik, J, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-10-19
Release date:2000-11-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an intracellular protease from Pyrococcus horikoshii at 2-A resolution.
Proc.Natl.Acad.Sci.USA, 97, 2000
1G8A
DownloadVisualize
BU of 1g8a by Molmil
PYROCOCCUS HORIKOSHII FIBRILLARIN PRE-RRNA PROCESSING PROTEIN
Descriptor: FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
Authors:Boisvert, D.C, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-11-16
Release date:2003-10-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A Structural Approach to Gene Function and Structure Quality for Pyrococcus horikoshii Fibrillarin
To be Published
1JX7
DownloadVisualize
BU of 1jx7 by Molmil
Crystal structure of ychN protein from E.coli
Descriptor: HYPOTHETICAL PROTEIN YCHN
Authors:Shin, D.H, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2001-09-05
Release date:2002-09-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a conserved hypothetical protein from Escherichia coli
J.STRUCT.FUNCT.GENOM., 2, 2002
1MJH
DownloadVisualize
BU of 1mjh by Molmil
Structure-based assignment of the biochemical function of hypothetical protein MJ0577: A test case of structural genomics
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PROTEIN (ATP-BINDING DOMAIN OF PROTEIN MJ0577)
Authors:Zarembinski, T.I, Hung, L.-W, Mueller-Dieckmann, H.J, Kim, K.-K, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:1998-11-04
Release date:1998-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomics.
Proc.Natl.Acad.Sci.USA, 95, 1998
1LQL
DownloadVisualize
BU of 1lql by Molmil
Crystal structure of OsmC like protein from Mycoplasma pneumoniae
Descriptor: osmotical inducible protein C like family
Authors:Choi, I.-G, Shin, D.H, Brandsen, J, Jancarik, J, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-05-10
Release date:2003-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution
J.STRUCT.FUNCT.GENOM., 4, 2003
1LFP
DownloadVisualize
BU of 1lfp by Molmil
Crystal Structure of a Conserved Hypothetical Protein Aq1575 from Aquifex Aeolicus
Descriptor: Hypothetical protein AQ_1575
Authors:Shin, D.H, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-04-11
Release date:2002-06-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of conserved hypothetical protein Aq1575 from Aquifex aeolicus.
Proc.Natl.Acad.Sci.USA, 99, 2002
1MGP
DownloadVisualize
BU of 1mgp by Molmil
Hypothetical protein TM841 from Thermotoga maritima reveals fatty acid binding function
Descriptor: Hypothetical protein TM841, PALMITIC ACID
Authors:Schulze-Gahmen, U, Pelaschier, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-08-15
Release date:2002-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a hypothetical protein, TM841 of Thermotoga maritima, reveals its function as fatty acid binding protein
Proteins, 50, 2003
1ILW
DownloadVisualize
BU of 1ilw by Molmil
Crystal Structure of Pyrazinamidase/Nicotinamidase of Pyrococcus horikoshii
Descriptor: 180 aa long hypothetical Pyrazinamidase/nicotinamidase
Authors:Du, X, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2001-05-08
Release date:2001-12-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure and mechanism of catalysis of a pyrazinamidase from Pyrococcus horikoshii.
Biochemistry, 40, 2001
1J97
DownloadVisualize
BU of 1j97 by Molmil
Phospho-Aspartyl Intermediate Analogue of Phosphoserine phosphatase
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Phosphoserine Phosphatase
Authors:Cho, H, Wang, W, Kim, R, Yokota, H, Damo, S, Kim, S.-H, Wemmer, D, Kustu, S, Yan, D, Berkeley Structural Genomics Center (BSGC)
Deposit date:2001-05-24
Release date:2001-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:BeF(3)(-) acts as a phosphate analog in proteins phosphorylated on aspartate: structure of a BeF(3)(-) complex with phosphoserine phosphatase.
Proc.Natl.Acad.Sci.USA, 98, 2001
1JEO
DownloadVisualize
BU of 1jeo by Molmil
Crystal Structure of the Hypothetical Protein MJ1247 from Methanococcus jannaschii at 2.0 A Resolution Infers a Molecular Function of 3-Hexulose-6-Phosphate isomerase.
Descriptor: CITRIC ACID, HYPOTHETICAL PROTEIN MJ1247
Authors:Martinez-Cruz, L.A, Dreyer, M.K, Boisvert, D.C, Yokota, H, Martinez-Chantar, M.L, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2001-06-18
Release date:2002-02-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of MJ1247 protein from M. jannaschii at 2.0 A resolution infers a molecular function of 3-hexulose-6-phosphate isomerase.
Structure, 10, 2002
2HQB
DownloadVisualize
BU of 2hqb by Molmil
Crystal Structure of a Transcriptional Activator of comK gene from Bacillus halodurans
Descriptor: Transcriptional activator of comK gene
Authors:Xu, Q.S, Berkeley Structural Genomics Center (BSGC)
Deposit date:2006-07-18
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a transcriptional activator of comK gene from Bacillus halodurans.
Proteins, 69, 2007
1L7M
DownloadVisualize
BU of 1l7m by Molmil
HIGH RESOLUTION LIGANDED STRUCTURE OF PHOSPHOSERINE PHOSPHATASE (PI COMPLEX)
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Phosphoserine Phosphatase
Authors:Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-03-15
Release date:2002-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1L7P
DownloadVisualize
BU of 1l7p by Molmil
SUBSTRATE BOUND PHOSPHOSERINE PHOSPHATASE COMPLEX STRUCTURE
Descriptor: PHOSPHATE ION, PHOSPHOSERINE, PHOSPHOSERINE PHOSPHATASE
Authors:Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-03-16
Release date:2002-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1L7N
DownloadVisualize
BU of 1l7n by Molmil
TRANSITION STATE ANALOGUE OF PHOSPHOSERINE PHOSPHATASE (ALUMINUM FLUORIDE COMPLEX)
Descriptor: ALUMINUM FLUORIDE, MAGNESIUM ION, PHOSPHOSERINE PHOSPHATASE, ...
Authors:Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-03-16
Release date:2002-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1L2F
DownloadVisualize
BU of 1l2f by Molmil
Crystal structure of NusA from Thermotoga maritima: a structure-based role of the N-terminal domain
Descriptor: N utilization substance protein A
Authors:Shin, D.H, Nguyen, H.H, Jancarik, J, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-02-20
Release date:2003-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of NusA from Thermotoga maritima and functional implication of the N-terminal domain.
Biochemistry, 42, 2003
1L7O
DownloadVisualize
BU of 1l7o by Molmil
CRYSTAL STRUCTURE OF PHOSPHOSERINE PHOSPHATASE IN APO FORM
Descriptor: ACETIC ACID, PHOSPHOSERINE PHOSPHATASE, ZINC ION
Authors:Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-03-16
Release date:2002-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1N0F
DownloadVisualize
BU of 1n0f by Molmil
CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF
Descriptor: Protein mraZ
Authors:Chen, S, Jancrick, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-10-13
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a protein associated with cell division from Mycoplasma pneumoniae (GI: 13508053): a novel fold with a conserved sequence motif.
Proteins, 55, 2004

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon