Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6DTX
DownloadVisualize
BU of 6dtx by Molmil
Wildtype HIV-1 Reverse Transcriptase in complex with JLJ 578
Descriptor: 8-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-6-fluoroindolizine-2-carbonitrile, GLYCEROL, Reverse transcriptase/ribonuclease H, ...
Authors:Sasaki, T, Gannam, Z.T.K, Anderson, K.S, Jorgensen, W.L, Lee, W.
Deposit date:2018-06-18
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.327 Å)
Cite:Molecular and cellular studies evaluating a potent 2-cyanoindolizine catechol diether NNRTI targeting wildtype and Y181C mutant HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 29, 2019
6DTW
DownloadVisualize
BU of 6dtw by Molmil
HIV-1 Reverse Transcriptase Y181C Mutant in complex with JLJ 578
Descriptor: 8-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-6-fluoroindolizine-2-carbonitrile, MAGNESIUM ION, Reverse transcriptase/ribonuclease H, ...
Authors:Sasaki, T, Gannam, Z.T.K, Anderson, K.S, Jorgensen, W.L, Lee, W.
Deposit date:2018-06-18
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.742 Å)
Cite:Molecular and cellular studies evaluating a potent 2-cyanoindolizine catechol diether NNRTI targeting wildtype and Y181C mutant HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 29, 2019
2C5D
DownloadVisualize
BU of 2c5d by Molmil
Structure of a minimal Gas6-Axl complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GROWTH-ARREST-SPECIFIC PROTEIN 6 PRECURSOR, ...
Authors:Sasaki, T, Knyazev, P.G, Clout, N.J, Cheburkin, Y, Goehring, W, Ullrich, A, Timpl, R, Hohenester, E.
Deposit date:2005-10-26
Release date:2005-12-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural Basis for Gas6-Axl Signalling.
Embo J., 25, 2006
1H30
DownloadVisualize
BU of 1h30 by Molmil
C-terminal LG domain pair of human Gas6
Descriptor: CALCIUM ION, GROWTH-ARREST-SPECIFIC PROTEIN, SULFATE ION
Authors:Sasaki, T, Knyazev, P.G, Cheburkin, Y, Gohring, W, Tisi, D, Ullrich, A, Timpl, R, Hohenester, E.
Deposit date:2002-08-21
Release date:2003-01-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a Carboxy-Terminal Fragment of Growth-Arrest-Specific Protein Gas6: Receptor Tyrosine Kinase Activation by Laminin G-Like Domains
J.Biol.Chem., 277, 2002
1WOZ
DownloadVisualize
BU of 1woz by Molmil
Crystal structure of uncharacterized protein ST1454 from Sulfolobus tokodaii
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, 177aa long conserved hypothetical protein (ST1454)
Authors:Sasaki, T, Tanaka, Y, Yasutake, Y, Yao, M, Tanaka, I, Tsumoto, K, Kumagai, I.
Deposit date:2004-08-27
Release date:2005-10-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of the uncharacterized protein ST1454 from Sulfolobus tokodaii.
To be Published
1DY2
DownloadVisualize
BU of 1dy2 by Molmil
Murine collagen alpha1(XV), endostatin domain
Descriptor: COLLAGEN ALPHA1(XV) CHAIN, SULFATE ION
Authors:Tisi, D, Hohenester, E, Sasaki, T, Timpl, R.
Deposit date:2000-01-21
Release date:2001-01-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Endostatin Derived from Collagens Xv and Xviii Differ in Structural and Binding Properties, Tissue Distribution and Anti-Angiogenic Activity
J.Mol.Biol., 301, 2000
1NUB
DownloadVisualize
BU of 1nub by Molmil
HELIX C DELETION MUTANT OF BM-40 FS-EC DOMAIN PAIR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BASEMENT MEMBRANE PROTEIN BM-40, CALCIUM ION
Authors:Hohenester, E, Sasaki, T, Timpl, R.
Deposit date:1997-12-05
Release date:1998-12-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure and mapping by site-directed mutagenesis of the collagen-binding epitope of an activated form of BM-40/SPARC/osteonectin.
EMBO J., 17, 1998
1WVT
DownloadVisualize
BU of 1wvt by Molmil
Crystal structure of uncharacterized protein ST2180 from Sulfolobus tokodaii
Descriptor: hypothetical protein ST2180
Authors:Sasaki, T, Tanaka, Y, Yasutake, Y, Tsumoto, K, Tanaka, I, Kumagai, I.
Deposit date:2004-12-27
Release date:2006-01-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular properties of two proteins homologous to PduO-type ATP:cob(I)alamin adenosyltransferase from Sulfolobus tokodaii
Proteins, 68, 2007
1BY2
DownloadVisualize
BU of 1by2 by Molmil
STRUCTURE OF M2BP SCAVENGER RECEPTOR CYSTEINE-RICH DOMAIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAC-2 BINDING PROTEIN
Authors:Hohenester, E, Sasaki, T, Timpl, R.
Deposit date:1998-10-23
Release date:1999-05-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a scavenger receptor cysteine-rich domain sheds light on an ancient superfamily.
Nat.Struct.Biol., 6, 1999
1DY1
DownloadVisualize
BU of 1dy1 by Molmil
Murine endostatin, crystal form III
Descriptor: COLLAGEN ALPHA1(XVIII) CHAIN, ZINC ION
Authors:Hohenester, E, Sasaki, T, Timpl, R.
Deposit date:2000-01-21
Release date:2001-01-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Variable Zinc Coordination in Endostatin
J.Mol.Biol., 297, 2000
1DY0
DownloadVisualize
BU of 1dy0 by Molmil
Murine endostatin, crystal form II
Descriptor: COLLAGEN ALPHA1(XVIII) CHAIN, ZINC ION
Authors:Hohenester, E, Sasaki, T, Timpl, R.
Deposit date:2000-01-21
Release date:2000-04-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Variable Zinc Coordination in Endostatin
J.Mol.Biol., 297, 2000
1F3K
DownloadVisualize
BU of 1f3k by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF OMEGA-CONOTOXIN TXVII, AN L-TYPE CALCIUM CHANNEL BLOCKER
Descriptor: OMEGA-CONOTOXIN TXVII
Authors:Kobayashi, K, Sasaki, T, Sato, K, Kohno, T.
Deposit date:2000-06-05
Release date:2000-12-13
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of omega-conotoxin TxVII, an L-type calcium channel blocker.
Biochemistry, 39, 2000
1FU3
DownloadVisualize
BU of 1fu3 by Molmil
THREE-DIMENSIONAL STRUCTURE IN SOLUTION OF THE SODIUM CHANNEL AGONIST/ANTAGONIST DELTA-CONOTOXIN TXVIA
Descriptor: DELTA-CONOTOXIN TXVIA
Authors:Kohno, T, Sasaki, T, Fainzilber, M, Sato, K.
Deposit date:2000-09-14
Release date:2002-09-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the sodium channel agonist/antagonist delta-conotoxin TxVIA.
J.Biol.Chem., 277, 2002
4J70
DownloadVisualize
BU of 4j70 by Molmil
Yeast 20S proteasome in complex with the belactosin derivative 3e
Descriptor: Proteasome component C1, Proteasome component C11, Proteasome component C5, ...
Authors:Kawamura, S, Unno, Y, List, A, Tanaka, M, Sasaki, T, Arisawa, M, Asai, A, Groll, M, Shuto, S.
Deposit date:2013-02-12
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Potent Proteasome Inhibitors Derived from the Unnatural cis-Cyclopropane Isomer of Belactosin A: Synthesis, Biological Activity, and Mode of Action.
J.Med.Chem., 56, 2013
1OKQ
DownloadVisualize
BU of 1okq by Molmil
LAMININ ALPHA 2 CHAIN LG4-5 DOMAIN PAIR, CA1 SITE MUTANT
Descriptor: CALCIUM ION, LAMININ ALPHA 2 CHAIN
Authors:Wizemann, H, Garbe, J.H.O, Friedrich, M.V.K, Timpl, R, Sasaki, T, Hohenester, E.
Deposit date:2003-07-28
Release date:2003-09-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Distinct Requirements for Heparin and Alpha-Dystroglycan Binding Revealed by Structure-Based Mutagenesis of the Laminin Alpha2 Lg4-Lg5 Domain Pair
J.Mol.Biol., 332, 2003
1V4Q
DownloadVisualize
BU of 1v4q by Molmil
Three-dimensional solution structure of the analogue peptide of omega-conotoxin MVIIC
Descriptor: omega-conotoxin MVIIC
Authors:Kobayashi, K, Sasaki, T, Sato, K, Kohno, T.
Deposit date:2003-11-17
Release date:2005-03-01
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the analogue peptide of omega-conotoxin MVIIC
To be Published
1V5A
DownloadVisualize
BU of 1v5a by Molmil
Solution Structure of Covalitoxin I
Descriptor: Covalitoxin-I
Authors:Kohno, T, Sasaki, T, Sato, K.
Deposit date:2003-11-21
Release date:2005-03-01
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of Covalitoxin I
To be Published
1WSC
DownloadVisualize
BU of 1wsc by Molmil
Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
Descriptor: Hypothetical protein ST0229
Authors:Murayama, T, Tanaka, Y, Sasaki, T, Yasutake, Y, Yao, M, Tsumoto, K, Tanaka, I, Kumagai, I.
Deposit date:2004-11-05
Release date:2005-11-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
To be Published
3ABV
DownloadVisualize
BU of 3abv by Molmil
Crystal structure of porcine heart mitochondrial complex II bound with N-Biphenyl-3-yl-2-trifluoromethyl-benzamide
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
Deposit date:2009-12-22
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Int J Mol Sci, 16, 2015
2V53
DownloadVisualize
BU of 2v53 by Molmil
Crystal structure of a SPARC-collagen complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COLLAGEN ALPHA-1(III) CHAIN, ...
Authors:Hohenester, E, Sasaki, T, Giudici, C, Farndale, R.W, Bachinger, H.P.
Deposit date:2008-10-01
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis of Sequence-Specific Collagen Recognition by Sparc.
Proc.Natl.Acad.Sci.USA, 105, 2008
1KOE
DownloadVisualize
BU of 1koe by Molmil
ENDOSTATIN
Descriptor: ENDOSTATIN
Authors:Hohenester, E, Sasaki, T, Olsen, B.R, Timpl, R.
Deposit date:1998-01-22
Release date:1999-02-16
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the angiogenesis inhibitor endostatin at 1.5 A resolution.
EMBO J., 17, 1998
3AED
DownloadVisualize
BU of 3aed by Molmil
Crystal structure of porcine heart mitochondrial complex II bound with 2-Iodo-N-phenyl-benzamide
Descriptor: 2-iodo-N-phenylbenzamide, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
Deposit date:2010-02-04
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Crystal structure of porcine heart mitochondrial complex II bound with 2-Iodo-N-phenyl-benzamide
To be Published
3AEG
DownloadVisualize
BU of 3aeg by Molmil
Crystal structure of porcine heart mitochondrial complex II bound with N-Biphenyl-3-yl-2-iodo-benzamide
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
Deposit date:2010-02-04
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal structure of porcine heart mitochondrial complex II bound with N-Biphenyl-3-yl-2-iodo-benzamide
To be Published
3AEA
DownloadVisualize
BU of 3aea by Molmil
Crystal structure of porcine heart mitochondrial complex II bound with N-(3-Dimethylaminomethyl-phenyl)-2-trifluoromethyl-benzamide
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
Deposit date:2010-02-04
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Int J Mol Sci, 16, 2015
3AE7
DownloadVisualize
BU of 3ae7 by Molmil
Crystal structure of porcine heart mitochondrial complex II bound with 2-Iodo-N-(3-isopropoxy-phenyl)-benzamide
Descriptor: 2-iodo-N-[3-(1-methylethoxy)phenyl]benzamide, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
Deposit date:2010-02-04
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.62 Å)
Cite:Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Int J Mol Sci, 16, 2015

 

1234>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon