Author results

3OPF
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CRYSTAL STRUCTURE OF TTHA0988 IN SPACE GROUP P212121
Descriptor:Putative uncharacterized protein TTHA0988, GLYCEROL, SULFATE ION
Authors:Jacques, D.A., Kuramitsu, S., Yokoyama, S., Trewhella, J., Guss, J.M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-09-01
Release date:2011-02-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The structure of TTHA0988 from Thermus thermophilus, a KipI-KipA homologue incorrectly annotated as an allophanate hydrolase
Acta Crystallogr.,Sect.D, 67, 2011
3ORE
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CRYSTAL STRUCTURE OF TTHA0988 IN SPACE GROUP P6522
Descriptor:Putative uncharacterized protein TTHA0988
Authors:Jacques, D.A., Kuramitsu, S., Yokoyama, S., Trewhella, J., Guss, J.M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-09-07
Release date:2011-02-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of TTHA0988 from Thermus thermophilus, a KipI-KipA homologue incorrectly annotated as an allophanate hydrolase
Acta Crystallogr.,Sect.D, 67, 2011
3U6U
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CRYSTAL STRUCTURE OF THE PUTATIVE ACETYLGLUTAMATE KINASE FROM THERMUS THERMOPHILUS
Descriptor:Putative acetylglutamate kinase, SULFATE ION
Authors:Karthe, P., Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-10-13
Release date:2011-11-16
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle
To be Published
3VNP
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CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN (GK2848) FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Hypothetical conserved protein, ACETIC ACID, MAGNESIUM ION
Authors:Karthe, P.P., Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2012-01-17
Release date:2012-03-07
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of hypothetical protein (GK2848) from Geobacillus Kaustophilus
To be Published
4RZU
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CRYSTAL STRUCTURE OF ADP BOUND DTMP KINASE (ST1543) FROM SULFOLOBUS TOKODAII STRAIN7
Descriptor:Probable thymidylate kinase, ADENOSINE-5'-DIPHOSPHATE, 1,2-ETHANEDIOL, ...
Authors:Biswas, A., Jeyakanthan, J., Sekar, K., Kuramitsu, S., Yokoyama, S.
Deposit date:2014-12-24
Release date:2015-12-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of ADP bound dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7
To be Published
5H70
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CRYSTAL STRUCTURE OF ADP BOUND DTMP KINASE (ST1543) FROM SULFOLOBUS TOKODAII STRAIN7
Descriptor:Probable thymidylate kinase, ADENOSINE-5'-DIPHOSPHATE, 1,2-ETHANEDIOL, ...
Authors:Biswas, A., Jeyakanthan, J., Sekar, K., Kuramitsu, S., Yokoyama, S.
Deposit date:2016-11-15
Release date:2016-12-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of ADP bound dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7
To Be Published
1UJ4
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CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE
Descriptor:ribose 5-phosphate isomerase, CHLORIDE ION
Authors:Hamada, K., Ago, H., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1UJ5
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CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE COMPLEXED WITH RIBOSE-5-PHOSPHATE
Descriptor:ribose 5-phosphate isomerase, RIBULOSE-5-PHOSPHATE, CHLORIDE ION
Authors:Hamada, K., Ago, H., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1UJ6
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CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE COMPLEXED WITH ARABINOSE-5-PHOSPHATE
Descriptor:ribose 5-phosphate isomerase, CHLORIDE ION, ARABINOSE-5-PHOSPHATE
Authors:Hamada, K., Ago, H., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
2DKF
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CRYSTAL STRUCTURE OF TTHA0252 FROM THERMUS THERMOPHILUS HB8, A RNA DEGRADATION PROTEIN OF THE METALLO-BETA-LACTAMASE SUPERFAMILY
Descriptor:metallo-beta-lactamase superfamily protein, ZINC ION
Authors:Ishikawa, I., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-10
Release date:2006-12-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TTHA0252 from Thermus thermophilus HB8, a RNA degradation protein of the metallo-beta-lactamase superfamily
J.Biochem.(Tokyo), 140, 2006
2DP9
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CRYSTAL STRUCTURE OF CONSERVED HYPOTHETICAL PROTEIN TTHA0113 FROM THERMUS THERMOPHILUS HB8
Descriptor:Hypothetical protein TTHA0113
Authors:Agari, Y., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-08
Release date:2006-11-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Conserved Hypothetical Protein TTHA0113 from Thermus thermophilus HB8
To be Published
2YUT
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CRYSTAL STRUCTURE OF PUTATIVE SHORT-CHAIN OXIDOREDUCTASE TTHB094 FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative short-chain oxidoreductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Putative Short-Chain Oxidoreductase TTHB094 from Thermus thermophilus HB8
To be Published
2YV4
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CRYSTAL STRUCTURE OF C-TERMINAL SUA5 DOMAIN FROM PYROCOCCUS HORIKOSHII HYPOTHETICAL SUA5 PROTEIN PH0435
Descriptor:Hypothetical protein PH0435
Authors:Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-09
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of C-terminal Sua5 Domain from Pyrococcus horikoshii Hypothetical Sua5 Protein PH0435
To be Published
2YVM
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CRYSTAL STRUCTURE OF NDX2 IN COMPLEX WITH MG2+ FROM THERMUS THERMOPHILUS HB8
Descriptor:MutT/nudix family protein, MAGNESIUM ION
Authors:Wakamatsu, T., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YVN
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CRYSTAL STRUCTURE OF NDX2 FROM THERMUS THERMOPHILUS HB8
Descriptor:MutT/nudix family protein
Authors:Wakamatsu, T., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YVO
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CRYSTAL STRUCTURE OF NDX2 IN COMPLEX WITH MG2+ AND AMP FROM THERMUS THERMOPHILUS HB8
Descriptor:MutT/nudix family protein, MAGNESIUM ION, ADENOSINE MONOPHOSPHATE
Authors:Wakamatsu, T., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YVP
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CRYSTAL STRUCTURE OF NDX2 IN COMPLEX WITH MG2+ AND AMPCPR FROM THERMUS THERMOPHILUS HB8
Descriptor:MutT/nudix family protein, MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE
Authors:Wakamatsu, T., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YYB
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CRYSTAL STRUCTURE OF TTHA1606 FROM THERMUS THERMOPHILUS HB8
Descriptor:Hypothetical protein TTHA1606
Authors:Tomoike, F., Nakagwa, N., Ebihara, A., Yokoyama, S., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-28
Release date:2008-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8.
Proteins, 76, 2009
2ZIE
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CRYSTAL STRUCTURE OF TTHA0409, PUTATATIVE DNA MODIFICATION METHYLASE FROM THERMUS THERMOPHILUS HB8- SELENOMETHIONINE DERIVATIVE
Descriptor:Putative modification methylase
Authors:Morita, R., Ishikawa, H., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-02-15
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
2ZIF
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CRYSTAL STRUCTURE OF TTHA0409, PUTATIVE DNA MODIFICATION METHYLASE FROM THERMUS THERMOPHILUS HB8- COMPLEXED WITH S-ADENOSYL-L-METHIONINE
Descriptor:Putative modification methylase, S-ADENOSYLMETHIONINE
Authors:Morita, R., Ishikawa, H., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-02-15
Release date:2008-07-29
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
2ZIG
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CRYSTAL STRUCTURE OF TTHA0409, PUTATIVE DNA MODIFICATION METHYLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative modification methylase
Authors:Morita, R., Ishikawa, H., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-02-15
Release date:2008-07-29
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
3A0J
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CRYSTAL STRUCTURE OF COLD SHOCK PROTEIN 1 FROM THERMUS THERMOPHILUS HB8
Descriptor:Cold shock protein
Authors:Miyazaki, T., Nakagawa, N., Kuramitsu, S., Masui, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-03-19
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Biological Action of Cold Shock Protein 1 from Thermus thermophilus HB8
To be Published
3A4Y
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CRYSTAL STRUCTURE OF H61A MUTANT TTHA0252 FROM THERMUS THERMOPHILUS HB8
Descriptor:Ribonuclease TTHA0252, SULFATE ION, CITRATE ANION, ...
Authors:Ishikawa, H., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-07-22
Release date:2009-08-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of H61A mutant TTHA0252 from Thermus thermophilus HB8
to be published
3AF5
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THE CRYSTAL STRUCTURE OF AN ARCHAEAL CPSF SUBUNIT, PH1404 FROM PYROCOCCUS HORIKOSHII
Descriptor:Putative uncharacterized protein PH1404, SULFATE ION, ACETIC ACID, ...
Authors:Nishida, Y., Ishikawa, H., Nakagawa, N., Masui, R., Kuramitsu, S.
Deposit date:2010-02-23
Release date:2010-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of an archaeal cleavage and polyadenylation specificity factor subunit from Pyrococcus horikoshii
Proteins, 78, 2010
3AF6
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THE CRYSTAL STRUCTURE OF AN ARCHAEAL CPSF SUBUNIT, PH1404 FROM PYROCOCCUS HORIKOSHII COMPLEXED WITH RNA-ANALOG
Descriptor:Putative uncharacterized protein PH1404, 5'-R(*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU)P*(SSU))-3', SULFATE ION, ...
Authors:Nishida, Y., Ishikawa, H., Nakagawa, N., Masui, R., Kuramitsu, S.
Deposit date:2010-02-24
Release date:2010-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of an archaeal cleavage and polyadenylation specificity factor subunit from Pyrococcus horikoshii
Proteins, 78, 2010