Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5NKM
DownloadVisualize
BU of 5nkm by Molmil
SMG8-SMG9 complex
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Li, L, Basquin, J, Conti, E.
Deposit date:2017-03-31
Release date:2017-04-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structure of a SMG8-SMG9 complex identifies a G-domain heterodimer in the NMD effector proteins.
RNA, 23, 2017
3ZIU
DownloadVisualize
BU of 3ziu by Molmil
Crystal structure of Mycoplasma mobile Leucyl-tRNA Synthetase with Leu-AMS in the active site
Descriptor: 5'-O-(L-leucylsulfamoyl)adenosine, GLYCEROL, LEUCYL-TRNA SYNTHETASE
Authors:Li, L, Palencia, A, Lukk, T, Li, Z, Luthey-Schulten, Z.A, Cusack, S, Martinis, S.A, Boniecki, M.T.
Deposit date:2013-01-10
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Leucyl-tRNA Synthetase Editing Domain Functions as a Molecular Rheostat to Control Codon Ambiguity in Mycoplasma Pathogens.
Proc.Natl.Acad.Sci.USA, 110, 2013
5NKK
DownloadVisualize
BU of 5nkk by Molmil
SMG8-SMG9 complex GDP bound
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Li, L, Basquin, J, Conti, E.
Deposit date:2017-03-31
Release date:2017-04-19
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure of a SMG8-SMG9 complex identifies a G-domain heterodimer in the NMD effector proteins.
RNA, 23, 2017
8FNZ
DownloadVisualize
BU of 8fnz by Molmil
Acetylated tau repeat 1 and 2 fragment (AcR1R2)
Descriptor: Microtubule-associated protein tau, acetylated repeat 1 and 2 fragment
Authors:Li, L, Nguyen, A.B, Mullapudi, V, Joachimiak, L.
Deposit date:2022-12-29
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Disease-associated patterns of acetylation stabilize tau fibril formation.
Structure, 31, 2023
3B9O
DownloadVisualize
BU of 3b9o by Molmil
long-chain alkane monooxygenase (LadA) in complex with coenzyme FMN
Descriptor: Alkane monooxygenase, FLAVIN MONONUCLEOTIDE
Authors:Li, L, Yang, W, Xu, F, Bartlam, M, Rao, Z.
Deposit date:2007-11-06
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of long-chain alkane monooxygenase (LadA) in complex with coenzyme FMN: unveiling the long-chain alkane hydroxylase
J.Mol.Biol., 376, 2008
3B9N
DownloadVisualize
BU of 3b9n by Molmil
Crystal structure of long-chain alkane monooxygenase (LadA)
Descriptor: Alkane monooxygenase
Authors:Li, L, Yang, W, Xu, F, Bartlam, M, Rao, Z.
Deposit date:2007-11-06
Release date:2008-01-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of long-chain alkane monooxygenase (LadA) in complex with coenzyme FMN: unveiling the long-chain alkane hydroxylase
J.Mol.Biol., 376, 2008
1QVO
DownloadVisualize
BU of 1qvo by Molmil
STRUCTURES OF HLA-A*1101 IN COMPLEX WITH IMMUNODOMINANT NONAMER AND DECAMER HIV-1 EPITOPES CLEARLY REVEAL THE PRESENCE OF A MIDDLE ANCHOR RESIDUE
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-11 alpha chain, ...
Authors:Li, L, McNicholl, J.M, Bouvier, M.
Deposit date:2003-08-28
Release date:2004-06-01
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structures of HLA-A*1101 complexed with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle, secondary anchor residue.
J.Immunol., 172, 2004
2PQ6
DownloadVisualize
BU of 2pq6 by Molmil
Crystal structure of Medicago truncatula UGT85H2- Insights into the structural basis of a multifunctional (Iso) flavonoid glycosyltransferase
Descriptor: UDP-glucuronosyl/UDP-glucosyltransferase
Authors:Li, L, Modolo, L.V, Escamilla-Trevino, L.L, Wang, X.
Deposit date:2007-05-01
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Medicago truncatula UGT85H2 - Insights into the Structural Basis of a Multifunctional (Iso)flavonoid Glycosyltransferase.
J.Mol.Biol., 370, 2007
6P27
DownloadVisualize
BU of 6p27 by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-21
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P2C
DownloadVisualize
BU of 6p2c by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-21
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.396 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P2S
DownloadVisualize
BU of 6p2s by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provide novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, MHC I-peptide, MHC class I antigen
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-22
Release date:2019-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P2F
DownloadVisualize
BU of 6p2f by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-21
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.482 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
6P23
DownloadVisualize
BU of 6p23 by Molmil
Structure of a nested set of N-terminally extended MHC I-peptides provide novel insights into antigen processing presentation
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ...
Authors:Li, L, Batliwala, M, Bouvier, M.
Deposit date:2019-05-20
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.595 Å)
Cite:ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation.
J.Biol.Chem., 294, 2019
8WMG
DownloadVisualize
BU of 8wmg by Molmil
Structure of ConA/Man3
Descriptor: 4-[3,5-bis(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
8WMK
DownloadVisualize
BU of 8wmk by Molmil
Structure of ConA/Man2
Descriptor: 4-[3-(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
Authors:Li, L, Chen, G.
Deposit date:2023-10-03
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
1Q94
DownloadVisualize
BU of 1q94 by Molmil
Structures of HLA-A*1101 in complex with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle anchor residue
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-11 alpha chain, ...
Authors:Li, L, McNicholl, J.M, Bouvier, M.
Deposit date:2003-08-22
Release date:2004-06-01
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of HLA-A*1101 complexed with immunodominant nonamer and decamer HIV-1 epitopes clearly reveal the presence of a middle, secondary anchor residue.
J.Immunol., 172, 2004
4E5X
DownloadVisualize
BU of 4e5x by Molmil
Crystal structure of a complex between the human adenovirus type 2 E3-19K protein and MHC class I molecule HLA-A2/Tax
Descriptor: Beta-2-microglobulin, Early E3 18.5 kDa glycoprotein, HLA class I histocompatibility antigen, ...
Authors:Li, L, Bouvier, M.
Deposit date:2012-03-14
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of adenovirus E3-19K bound to HLA-A2 reveals mechanism for immunomodulation.
Nat.Struct.Mol.Biol., 19, 2012
2MMF
DownloadVisualize
BU of 2mmf by Molmil
Solution structure of AGA modified
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*AP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*TP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-14
Release date:2015-02-25
Last modified:2015-12-23
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMR
DownloadVisualize
BU of 2mmr by Molmil
AGC FAPY modified duplex Major isomer
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*CP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*GP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2015-12-23
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMQ
DownloadVisualize
BU of 2mmq by Molmil
Solution structure of AGT FAPY Modified duplex
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2015-12-23
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMS
DownloadVisualize
BU of 2mms by Molmil
AG(7-deaza)G FAPY modified duplex
Descriptor: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*(7GU)P*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*CP*CP*TP*TP*AP*G)-3')
Authors:Li, L, Stone, M.
Deposit date:2014-03-17
Release date:2015-02-25
Last modified:2015-12-23
Method:SOLUTION NMR
Cite:DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
3C6D
DownloadVisualize
BU of 3c6d by Molmil
The pseudo-atomic structure of dengue immature virus
Descriptor: Polyprotein, prM
Authors:Li, L.
Deposit date:2008-02-04
Release date:2008-04-08
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation
Science, 319, 2008
3C5X
DownloadVisualize
BU of 3c5x by Molmil
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at low pH
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]alpha-D-altropyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, L.
Deposit date:2008-02-01
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation.
Science, 319, 2008
3C6E
DownloadVisualize
BU of 3c6e by Molmil
Crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at neutral pH
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Li, L.
Deposit date:2008-02-04
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The flavivirus precursor membrane-envelope protein complex: structure and maturation.
Science, 319, 2008
5IRO
DownloadVisualize
BU of 5iro by Molmil
Crystal structure of a complex between the Human adenovirus type 4 E3-19K protein and MHC class molecule HLA-A2/TAX
Descriptor: Beta-2-microglobulin, E3 19 kDa protein, HLA class I histocompatibility antigen, ...
Authors:Li, L, Bouvier, M.
Deposit date:2016-03-14
Release date:2016-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure of the Adenovirus Type 4 (Species E) E3-19K/HLA-A2 Complex Reveals Species-Specific Features in MHC Class I Recognition.
J Immunol., 197, 2016

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon