Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6WSL
DownloadVisualize
BU of 6wsl by Molmil
Cryo-EM structure of VASH1-SVBP bound to microtubules
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Small vasohibin-binding protein, ...
Authors:Li, F, Li, Y, Yu, H.
Deposit date:2020-05-01
Release date:2020-08-26
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of VASH1-SVBP bound to microtubules.
Elife, 9, 2020
6OCG
DownloadVisualize
BU of 6ocg by Molmil
Crystal structure of VASH1-SVBP complex bound with EpoY
Descriptor: CHLORIDE ION, GLYCEROL, N-[(3R)-4-ethoxy-3-hydroxy-4-oxobutanoyl]-L-tyrosine, ...
Authors:Li, F, Luo, X, Yu, H.
Deposit date:2019-03-23
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.833 Å)
Cite:Structural basis of tubulin detyrosination by vasohibins.
Nat.Struct.Mol.Biol., 26, 2019
6OCF
DownloadVisualize
BU of 6ocf by Molmil
The crystal structure of VASH1-SVBP complex
Descriptor: CHLORIDE ION, GLYCEROL, Small vasohibin-binding protein, ...
Authors:Li, F, Luo, X, Yu, H.
Deposit date:2019-03-23
Release date:2019-06-26
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Structural basis of tubulin detyrosination by vasohibins.
Nat.Struct.Mol.Biol., 26, 2019
6OCH
DownloadVisualize
BU of 6och by Molmil
Crystal structure of VASH1-SVBP complex bound with parthenolide
Descriptor: GLYCEROL, SULFATE ION, Small vasohibin-binding protein, ...
Authors:Li, F, Luo, X, Yu, H.
Deposit date:2019-03-23
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural basis of tubulin detyrosination by vasohibins.
Nat.Struct.Mol.Biol., 26, 2019
2AJF
DownloadVisualize
BU of 2ajf by Molmil
Structure of SARS coronavirus spike receptor-binding domain complexed with its receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme-Related Carboxypeptidase (Ace2), CHLORIDE ION, ...
Authors:Li, F, Li, W, Farzan, M, Harrison, S.C.
Deposit date:2005-08-01
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of SARS coronavirus spike receptor-binding domain complexed with receptor.
Science, 309, 2005
8EON
DownloadVisualize
BU of 8eon by Molmil
Pseudomonas phage E217 baseplate complex
Descriptor: Baseplate component gp33, Baseplate component gp34, Baseplate component gp36, ...
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2022-10-03
Release date:2023-07-26
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun, 14, 2023
8ENV
DownloadVisualize
BU of 8env by Molmil
In situ cryo-EM structure of Pseudomonas phage E217 tail baseplate in C6 map
Descriptor: Baseplate_J domain-containing protein gp44, Ripcord gp36, Sheath initiator gp34, ...
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2022-09-30
Release date:2023-07-26
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun, 14, 2023
8FRS
DownloadVisualize
BU of 8frs by Molmil
Pseudomonas phage E217 5-fold vertex (capsid and decorating proteins)
Descriptor: Major structural protein, Structural protein gp24
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2023-01-08
Release date:2023-07-26
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun, 14, 2023
8FVG
DownloadVisualize
BU of 8fvg by Molmil
Pseudomonas phage E217 contracted sheath
Descriptor: Sheath protein gp31
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2023-01-18
Release date:2023-07-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun, 14, 2023
8FVH
DownloadVisualize
BU of 8fvh by Molmil
Pseudomonas phage E217 neck (portal, head-to-tail connector, collar and gateway proteins)
Descriptor: E217 collar protein gp28, E217 gateway protein gp29, E217 head-to-tail connector protein gp27, ...
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2023-01-18
Release date:2023-07-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun, 14, 2023
4XYW
DownloadVisualize
BU of 4xyw by Molmil
Glycosyltransferases WbnH
Descriptor: O-antigen biosynthesis glycosyltransferase WbnH, SULFATE ION
Authors:Li, F.
Deposit date:2015-02-03
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Glycosyltransferases WbnH
To Be Published
8FUV
DownloadVisualize
BU of 8fuv by Molmil
Pseudomonas phage E217 extended sheath and tail tube
Descriptor: Sheath protein gp31, Tail fiber protein gp32
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2023-01-18
Release date:2023-07-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun, 14, 2023
4Y3I
DownloadVisualize
BU of 4y3i by Molmil
PAS-GAF fragment from Deinococcus radiodurans BphP assembled with BV - Y307S, low dose
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome
Authors:Li, F, Burgie, E.S, Yu, T, Heroux, A, Schatz, G.C, Vierstra, R.D, Orville, A.M.
Deposit date:2015-02-10
Release date:2015-05-20
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome.
J.Am.Chem.Soc., 137, 2015
4Y5F
DownloadVisualize
BU of 4y5f by Molmil
PAS-GAF fragment from Deinococcus radiodurans BphP assembled with BV - Y307S, high dose
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
Authors:Li, F, Burgie, E.S, Yu, T, Heroux, A, Schatz, G.C, Vierstra, R.D, Orville, A.M.
Deposit date:2015-02-11
Release date:2015-05-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray radiation induces deprotonation of the bilin chromophore in crystalline D. radiodurans phytochrome.
J.Am.Chem.Soc., 137, 2015
3UIU
DownloadVisualize
BU of 3uiu by Molmil
Crystal structure of Apo-PKR kinase domain
Descriptor: Interferon-induced, double-stranded RNA-activated protein kinase
Authors:Li, F, Li, S, Yang, X, Shen, Y, Zhang, T.
Deposit date:2011-11-06
Release date:2012-11-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Crystal structure of Apo-PKR kinase domain
TO BE PUBLISHED
3D0H
DownloadVisualize
BU of 3d0h by Molmil
Crystal structure of spike protein receptor-binding domain from the 2002-2003 SARS coronavirus civet strain complexed with human-civet chimeric receptor ACE2
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, F.
Deposit date:2008-05-01
Release date:2008-07-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural analysis of major species barriers between humans and palm civets for severe acute respiratory syndrome coronavirus infections
J.Virol., 82, 2008
3D0I
DownloadVisualize
BU of 3d0i by Molmil
Crystal structure of spike protein receptor-binding domain from the 2005-2006 SARS coronavirus civet strain complexed with human-civet chimeric receptor ACE2
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, F.
Deposit date:2008-05-01
Release date:2008-07-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural analysis of major species barriers between humans and palm civets for severe acute respiratory syndrome coronavirus infections
J.Virol., 82, 2008
3D0G
DownloadVisualize
BU of 3d0g by Molmil
Crystal structure of spike protein receptor-binding domain from the 2002-2003 SARS coronavirus human strain complexed with human-civet chimeric receptor ACE2
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, F.
Deposit date:2008-05-01
Release date:2008-07-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural analysis of major species barriers between humans and palm civets for severe acute respiratory syndrome coronavirus infections
J.Virol., 82, 2008
1MIV
DownloadVisualize
BU of 1miv by Molmil
Crystal structure of Bacillus stearothermophilus CCA-adding enzyme
Descriptor: MAGNESIUM ION, tRNA CCA-adding enzyme
Authors:Li, F, Xiong, Y, Wang, J, Cho, H.D, Weiner, A.M, Steitz, T.A.
Deposit date:2002-08-23
Release date:2002-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP
Cell(Cambridge,Mass.), 111, 2002
1MIW
DownloadVisualize
BU of 1miw by Molmil
Crystal structure of Bacillus stearothermophilus CCA-adding enzyme in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA CCA-adding enzyme
Authors:Li, F, Xiong, Y, Wang, J, Cho, H.D, Weiner, A.M, Steitz, T.A.
Deposit date:2002-08-23
Release date:2002-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP
Cell(Cambridge,Mass.), 111, 2002
1MIY
DownloadVisualize
BU of 1miy by Molmil
Crystal structure of Bacillus stearothermophilus CCA-adding enzyme in complex with CTP
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA CCA-adding enzyme
Authors:Li, F, Xiong, Y, Wang, J, Cho, H.D, Weiner, A.M, Steitz, T.A.
Deposit date:2002-08-23
Release date:2002-12-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP
Cell(Cambridge,Mass.), 111, 2002
4ROU
DownloadVisualize
BU of 4rou by Molmil
Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
Descriptor: CHLORIDE ION, Mitochondrial ribonuclease P protein 3, ZINC ION
Authors:Li, F, Liu, X, Yang, X, Shen, Y.
Deposit date:2014-10-29
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.713 Å)
Cite:Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
TO BE PUBLISHED
4UC3
DownloadVisualize
BU of 4uc3 by Molmil
Translocator protein 18 kDa (TSPO) from Rhodobacter sphaeroides wild type
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoate, TRANSLOCATOR PROTEIN TSPO
Authors:Li, F, Liu, J, Zheng, Y, Garavito, R.M, Ferguson-Miller, S.
Deposit date:2014-08-13
Release date:2015-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism.
Science, 347, 2015
4UC1
DownloadVisualize
BU of 4uc1 by Molmil
High resolution crystal structure of translocator protein 18kDa (TSPO) from Rhodobacter sphaeroides (A139T Mutant) in C2 space group
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)-3-hydroxypropan-2-yl (11Z)-octadec-11-enoate, METHOXY-ETHOXYL, ...
Authors:Li, F, Liu, J, Zheng, Y, Garavito, R.M, Ferguson-Miller, S.
Deposit date:2014-08-13
Release date:2015-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism.
Science, 347, 2015
4UC2
DownloadVisualize
BU of 4uc2 by Molmil
Crystal structure of translocator protein 18kDa (TSPO) from rhodobacter sphaeroides (A139T mutant) in P212121 space group
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, TETRAETHYLENE GLYCOL, TRANSLOCATOR PROTEIN TSPO
Authors:Li, F, Liu, J, Zheng, Y, Garavito, R.M, Ferguson-Miller, S.
Deposit date:2014-08-13
Release date:2015-02-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism.
Science, 347, 2015

218196

PDB entries from 2024-04-10

PDB statisticsPDBj update infoContact PDBjnumon