Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8FAJ
DownloadVisualize
BU of 8faj by Molmil
OXA-48-NA-1-157 inhibitor complex
Descriptor: (5R)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase, CADMIUM ION, ...
Authors:Smith, C.A, Stewart, N.K, Toth, M, Vakulenko, S.B.
Deposit date:2022-11-28
Release date:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The C5 alpha-Methyl-Substituted Carbapenem NA-1-157 Exhibits Potent Activity against Klebsiella spp. Isolates Producing OXA-48-Type Carbapenemases.
Acs Infect Dis., 9, 2023
1LCF
DownloadVisualize
BU of 1lcf by Molmil
CRYSTAL STRUCTURE OF COPPER-AND OXALATE-SUBSTITUTED HUMAN LACTOFERRIN AT 2.0 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, COPPER (II) ION, ...
Authors:Smith, C.A, Anderson, B.F, Baker, H.M, Baker, E.N.
Deposit date:1994-01-11
Release date:1994-08-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of copper- and oxalate-substituted human lactoferrin at 2.0 A resolution.
Acta Crystallogr.,Sect.D, 50, 1994
1MNE
DownloadVisualize
BU of 1mne by Molmil
TRUNCATED HEAD OF MYOSIN FROM DICTYOSTELIUM DISCOIDEUM COMPLEXED WITH MG-PYROPHOSPHATE
Descriptor: MAGNESIUM ION, MYOSIN, PYROPHOSPHATE 2-
Authors:Smith, C.A, Rayment, I.
Deposit date:1995-04-20
Release date:1996-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray structure of the magnesium(II)-pyrophosphate complex of the truncated head of Dictyostelium discoideum myosin to 2.7 A resolution.
Biochemistry, 34, 1995
4QC6
DownloadVisualize
BU of 4qc6 by Molmil
Crystal structure of aminoglycoside 6'-acetyltransferase-Ie
Descriptor: (3R,5S,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3,5-diphosphaheptadecane-17-sulfinic acid 3,5-dioxide (non-preferred name), Bifunctional AAC/APH, FORMIC ACID, ...
Authors:Smith, C.A, Toth, M, Weiss, T.M, Frase, H, Vakulenko, S.B.
Deposit date:2014-05-09
Release date:2014-10-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the bifunctional aminoglycoside-resistance enzyme AAC(6')-Ie-APH(2'')-Ia revealed by crystallographic and small-angle X-ray scattering analysis.
Acta Crystallogr.,Sect.D, 70, 2014
6BFF
DownloadVisualize
BU of 6bff by Molmil
Structure of the aminoglycoside acetyltransferase AAC(6')-Im
Descriptor: Aminoglycoside acetyltransferase, MAGNESIUM ION
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2017-10-26
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Aminoglycoside resistance profile and structural architecture of the aminoglycoside acetyltransferase AAC(6')-Im.
Microb Cell, 4, 2017
6BFH
DownloadVisualize
BU of 6bfh by Molmil
Structure of the kanamycin complex of aminoglycoside acetyltransferase AAC(6')-Im
Descriptor: Aminoglycoside acetyltransferase, GLYCEROL, KANAMYCIN A
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2017-10-26
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Aminoglycoside resistance profile and structural architecture of the aminoglycoside acetyltransferase AAC(6')-Im.
Microb Cell, 4, 2017
7USZ
DownloadVisualize
BU of 7usz by Molmil
Human DDAH-1, holo (Zn-bound) form
Descriptor: CHLORIDE ION, N(G),N(G)-dimethylarginine dimethylaminohydrolase 1, ZINC ION
Authors:Smith, C.A, Ghebre, Y.T.
Deposit date:2022-04-26
Release date:2022-05-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Esomeprazole covalently interacts with the cardiovascular enzyme dimethylarginine dimethylaminohydrolase: Insights into the cardiovascular risk of proton pump inhibitors.
Biochim Biophys Acta Gen Subj, 1866, 2022
7UT0
DownloadVisualize
BU of 7ut0 by Molmil
Human DDAH-1, apo form
Descriptor: 1,2-ETHANEDIOL, N(G),N(G)-dimethylarginine dimethylaminohydrolase 1
Authors:Smith, C.A, Ghebre, Y.T.
Deposit date:2022-04-26
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Esomeprazole covalently interacts with the cardiovascular enzyme dimethylarginine dimethylaminohydrolase: Insights into the cardiovascular risk of proton pump inhibitors.
Biochim Biophys Acta Gen Subj, 1866, 2022
4ZDX
DownloadVisualize
BU of 4zdx by Molmil
Structure of OXA-51 beta-lactamase
Descriptor: 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, Beta-lactamase, GLYCEROL
Authors:Smith, C.A, Antunes, N.T, Stewart, N.K, Frase, H, Toth, M, Kantardjieff, K.A, Vakulenko, S.B.
Deposit date:2015-04-20
Release date:2015-06-17
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural Basis for Enhancement of Carbapenemase Activity in the OXA-51 Family of Class D beta-Lactamases.
Acs Chem.Biol., 10, 2015
6CTZ
DownloadVisualize
BU of 6ctz by Molmil
Structure of the GDP and kanamycin complex of APH(2")-IIia
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, Gentamicin resistance protein, ...
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2018-03-23
Release date:2019-03-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structural basis for the diversity of the mechanism of nucleotide hydrolysis by the aminoglycoside-2''-phosphotransferases
Acta Crystallogr.,Sect.D, 75, 2019
3TDV
DownloadVisualize
BU of 3tdv by Molmil
Structure of the GDP complex of wild-type aminoglycoside 2'-phosphotransferase-IIIa
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Gentamicin resistance protein, MAGNESIUM ION
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2011-08-11
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Aminoglycoside-2' phosphotransferase-IIIa (APH(2')-IIIa) prefers GTP over ATP: Structural templates for nucleotide recognition in the bacterial aminoglycoside-2' kinases.
J.Biol.Chem., 287, 2012
3TDW
DownloadVisualize
BU of 3tdw by Molmil
The GDP complex of the aminoglycoside 2'-phosphotransfere-IIIa F108L mutant
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Gentamicin resistance protein, MAGNESIUM ION
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2011-08-11
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Aminoglycoside 2''-Phosphotransferase IIIa (APH(2'')-IIIa) Prefers GTP over ATP: STRUCTURAL TEMPLATES FOR NUCLEOTIDE RECOGNITION IN THE BACTERIAL AMINOGLYCOSIDE-2'' KINASES.
J.Biol.Chem., 287, 2012
1LFI
DownloadVisualize
BU of 1lfi by Molmil
METAL SUBSTITUTION IN TRANSFERRINS: THE CRYSTAL STRUCTURE OF HUMAN COPPER-LACTOFERRIN AT 2.1 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, COPPER (II) ION, ...
Authors:Smith, C.A, Anderson, B.F, Baker, H.M, Baker, E.N.
Deposit date:1992-02-10
Release date:1993-10-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Metal substitution in transferrins: the crystal structure of human copper-lactoferrin at 2.1-A resolution.
Biochemistry, 31, 1992
2GCB
DownloadVisualize
BU of 2gcb by Molmil
G51S/S52T double mutant of L. casei FPGS
Descriptor: Folylpolyglutamate synthase
Authors:Smith, C.A, Cross, J.A, Bognar, A.L, Sun, X.
Deposit date:2006-03-13
Release date:2006-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutation of Gly51 to serine in the P-loop of Lactobacillus casei folylpolyglutamate synthetase abolishes activity by altering the conformation of two adjacent loops.
Acta Crystallogr.,Sect.D, 62, 2006
2GC5
DownloadVisualize
BU of 2gc5 by Molmil
G51S mutant of L. casei FPGS
Descriptor: Folylpolyglutamate synthase, SULFATE ION
Authors:Smith, C.A, Cross, J.A, Bognar, A.L, Sun, X.
Deposit date:2006-03-13
Release date:2006-06-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mutation of Gly51 to serine in the P-loop of Lactobacillus casei folylpolyglutamate synthetase abolishes activity by altering the conformation of two adjacent loops.
Acta Crystallogr.,Sect.D, 62, 2006
2GC6
DownloadVisualize
BU of 2gc6 by Molmil
S73A mutant of L. casei FPGS
Descriptor: Folylpolyglutamate synthase, SULFATE ION
Authors:Smith, C.A, Cross, J.A, Bognar, A.L, Sun, X.
Deposit date:2006-03-13
Release date:2006-06-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mutation of Gly51 to serine in the P-loop of Lactobacillus casei folylpolyglutamate synthetase abolishes activity by altering the conformation of two adjacent loops.
Acta Crystallogr.,Sect.D, 62, 2006
2GCA
DownloadVisualize
BU of 2gca by Molmil
apo form of L. casei FPGS
Descriptor: Folylpolyglutamate synthase
Authors:Smith, C.A, Cross, J.A, Bognar, A.L, Sun, X.
Deposit date:2006-03-13
Release date:2006-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mutation of Gly51 to serine in the P-loop of Lactobacillus casei folylpolyglutamate synthetase abolishes activity by altering the conformation of two adjacent loops.
Acta Crystallogr.,Sect.D, 62, 2006
4GOG
DownloadVisualize
BU of 4gog by Molmil
Crystal structure of the GES-1 imipenem acyl-enzyme complex
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase GES-1, IODIDE ION, ...
Authors:Smith, C.A, Vakulenko, S.B, Munoz, J.
Deposit date:2012-08-20
Release date:2013-07-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural basis for progression toward the carbapenemase activity in the GES family of beta-lactamases.
J.Am.Chem.Soc., 134, 2012
4GNU
DownloadVisualize
BU of 4gnu by Molmil
Crystal structure of GES-5 carbapenemase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase GES-5
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2012-08-17
Release date:2013-07-24
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Structural basis for progression toward the carbapenemase activity in the GES family of beta-lactamases.
J.Am.Chem.Soc., 134, 2012
4H8R
DownloadVisualize
BU of 4h8r by Molmil
Imipenem complex of GES-5 carbapenemase
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Extended-spectrum beta-lactamase GES-5, IODIDE ION, ...
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2012-09-23
Release date:2013-07-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural basis for progression toward the carbapenemase activity in the GES family of beta-lactamases.
J.Am.Chem.Soc., 134, 2012
5F83
DownloadVisualize
BU of 5f83 by Molmil
Imipenem complex of the GES-5 C69G mutant
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2015-12-09
Release date:2016-09-07
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Role of the Conserved Disulfide Bridge in Class A Carbapenemases.
J.Biol.Chem., 291, 2016
5F82
DownloadVisualize
BU of 5f82 by Molmil
Apo GES-5 C69G mutant
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2015-12-08
Release date:2016-09-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Role of the Conserved Disulfide Bridge in Class A Carbapenemases.
J.Biol.Chem., 291, 2016
4JF5
DownloadVisualize
BU of 4jf5 by Molmil
Structure of OXA-23 at pH 4.1
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CITRATE ANION
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2013-02-27
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural Basis for Carbapenemase Activity of the OXA-23 beta-Lactamase from Acinetobacter baumannii.
Chem.Biol., 20, 2013
6P96
DownloadVisualize
BU of 6p96 by Molmil
OXA-48 carbapanemase, apo form
Descriptor: Beta-lactamase, CADMIUM ION, CALCIUM ION, ...
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2019-06-10
Release date:2019-08-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insights into the Mechanism of Carbapenemase Activity of the OXA-48 beta-Lactamase.
Antimicrob.Agents Chemother., 63, 2019
6P9C
DownloadVisualize
BU of 6p9c by Molmil
OXA-48 carbapanemase, doripenem complex
Descriptor: (4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase, CADMIUM ION, ...
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2019-06-10
Release date:2019-08-07
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into the Mechanism of Carbapenemase Activity of the OXA-48 beta-Lactamase.
Antimicrob.Agents Chemother., 63, 2019

218196

PDB entries from 2024-04-10

PDB statisticsPDBj update infoContact PDBjnumon