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2FSD
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BU of 2fsd by Molmil
A Common Fold for the Receptor Binding Domains of Lactococcal Phages? The Crystal Structure of the Head Domain of Phage bIL170
Descriptor: putative baseplate protein
Authors:Ricagno, S, Cambillau, C.
Deposit date:2006-01-22
Release date:2006-09-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Receptor-Binding Protein Head Domain from Lactococcus lactis Phage bIL170
J.Virol., 80, 2006
1P5R
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BU of 1p5r by Molmil
Formyl-CoA Transferase in complex with Coenzyme A
Descriptor: COENZYME A, Formyl-coenzyme A transferase
Authors:Ricagno, S, Jonsson, S, Richards, N, Lindqvist, Y.
Deposit date:2003-04-28
Release date:2003-07-29
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Formyl-CoA Transferase encloses the CoA binding site at the interface of an interlocked dimer
Embo J., 22, 2003
1P5H
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BU of 1p5h by Molmil
Crystal structure of Formyl-CoA Transferase (apoenzyme) from Oxalobacter formigenes
Descriptor: Formyl-coenzyme A transferase
Authors:Ricagno, S, Jonsson, S, Richards, N, Lindqvist, Y.
Deposit date:2003-04-27
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Formyl-CoA Transferase encloses the CoA binding site at the interface of an interlocked dimer
Embo J., 22, 2003
1R0K
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BU of 1r0k by Molmil
Crystal structure of 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Zymomonas mobilis
Descriptor: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, ACETATE ION
Authors:Ricagno, S, Grolle, S, Bringer-Meyer, S, Sahm, H, Lindqvist, Y, Schneider, G.
Deposit date:2003-09-22
Release date:2004-07-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from Zymomonas mobilis at 1.9-A resolution.
Biochim.Biophys.Acta, 1698, 2004
1R0L
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BU of 1r0l by Molmil
1-deoxy-D-xylulose 5-phosphate reductoisomerase from zymomonas mobilis in complex with NADPH
Descriptor: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ricagno, S, Grolle, S, Bringer-Meyer, S, Sahm, H, Lindqvist, Y, Schneider, G.
Deposit date:2003-09-22
Release date:2004-07-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from Zymomonas mobilis at 1.9-A resolution.
Biochim.Biophys.Acta, 1698, 2004
2H85
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BU of 2h85 by Molmil
Crystal Structure of Nsp 15 from SARS
Descriptor: Putative orf1ab polyprotein
Authors:Ricagno, S, Egloff, M.P, Ulferts, R, Coutard, B, Nurizzo, D, Campanacci, V, Cambillau, C, Ziebuhr, J, Canard, B.
Deposit date:2006-06-06
Release date:2006-08-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure and mechanistic determinants of SARS coronavirus nonstructural protein 15 define an endoribonuclease family.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2V2K
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BU of 2v2k by Molmil
THE CRYSTAL STRUCTURE OF FDXA, A 7FE FERREDOXIN FROM MYCOBACTERIUM SMEGMATIS
Descriptor: ACETATE ION, FE3-S4 CLUSTER, FERREDOXIN
Authors:Ricagno, S, de Rosa, M, Aliverti, A, Zanetti, G, Bolognesi, M.
Deposit date:2007-06-06
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of Fdxa, a 7Fe Ferredoxin from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 360, 2007
3DHJ
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BU of 3dhj by Molmil
Beta 2 microglobulin mutant W60C
Descriptor: Beta-2-microglobulin
Authors:Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
Deposit date:2008-06-18
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
3DHM
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BU of 3dhm by Molmil
Beta 2 microglobulin mutant D59P
Descriptor: Beta-2-microglobulin
Authors:Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
Deposit date:2008-06-18
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
3EKC
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BU of 3ekc by Molmil
structure of W60V beta-2 microglobulin mutant
Descriptor: Beta-2-microglobulin
Authors:Ricagno, S, Sangiovanni, E, Bellotti, V, Bolognesi, M.
Deposit date:2008-09-19
Release date:2009-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Human beta-2 microglobulin W60V mutant structure: Implications for stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 380, 2009
3F02
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BU of 3f02 by Molmil
Cleaved human neuroserpin
Descriptor: Neuroserpin
Authors:Ricagno, S, Sorrentino, G, Caccia, S, Bolognesi, M.
Deposit date:2008-10-24
Release date:2009-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Human neuroserpin: structure and time-dependent inhibition
J.Mol.Biol., 388, 2009
3F5N
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BU of 3f5n by Molmil
Structure of native human neuroserpin
Descriptor: Neuroserpin
Authors:Ricagno, S, Caccia, S, Sorrentino, G, Bolognesi, M.
Deposit date:2008-11-04
Release date:2009-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Human neuroserpin: structure and time-dependent inhibition
J.Mol.Biol., 388, 2009
4FXL
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BU of 4fxl by Molmil
Crystal structure of the D76N Beta-2 Microglobulin mutant
Descriptor: ACETATE ION, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
Authors:Ricagno, S, Bellotti, V, Pepys, M.B, Stoppini, M, Bolognesi, M.
Deposit date:2012-07-03
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Hereditary systemic amyloidosis due to Asp76Asn variant beta-2-microglobulin.
N.Engl.J.Med., 366, 2012
6TCC
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BU of 6tcc by Molmil
Crystal structure of Salmo salar RidA-1
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Ricagno, S, Visentin, C, Di Pisa, F, Digiovanni, S, Oberti, L, Degani, G, Popolo, L, Bartorelli, A.
Deposit date:2019-11-05
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Two novel fish paralogs provide insights into the Rid family of imine deaminases active in pre-empting enamine/imine metabolic damage.
Sci Rep, 10, 2020
6TCD
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BU of 6tcd by Molmil
Crystal structure of Salmo salar RidA-2
Descriptor: ACETATE ION, Ribonuclease UK114, SULFATE ION
Authors:Ricagno, S, Visentin, C, Di Pisa, F, Digiovanni, S, Oberti, L, Degani, G, Popolo, L, Bartorelli, A.
Deposit date:2019-11-05
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Two novel fish paralogs provide insights into the Rid family of imine deaminases active in pre-empting enamine/imine metabolic damage.
Sci Rep, 10, 2020
3QDA
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BU of 3qda by Molmil
Crystal structure of W95L beta-2 microglobulin
Descriptor: Beta-2-microglobulin, TRIETHYLENE GLYCOL
Authors:Ricagno, S, Bellotti, V, Bolognesi, M.
Deposit date:2011-01-18
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The two tryptophans of beta2-microglobulin have distinct roles in function and folding and might represent two independent responses to evolutionary pressure.
BMC Evol Biol, 11, 2011
1T4C
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BU of 1t4c by Molmil
Formyl-CoA Transferase in complex with Oxalyl-CoA
Descriptor: COENZYME A, Formyl-CoA:oxalate CoA-transferase, OXALIC ACID
Authors:Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
Deposit date:2004-04-29
Release date:2004-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
1T3Z
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BU of 1t3z by Molmil
Formyl-CoA Tranferase mutant Asp169 to Ser
Descriptor: Formyl-coenzyme A transferase, OXIDIZED COENZYME A
Authors:Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
Deposit date:2004-04-28
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
1VGR
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BU of 1vgr by Molmil
Formyl-CoA transferase mutant Asp169 to Glu
Descriptor: COENZYME A, Formyl-coenzyme A transferase
Authors:Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
Deposit date:2004-04-28
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
1VGQ
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BU of 1vgq by Molmil
Formyl-CoA transferase mutant Asp169 to Ala
Descriptor: Formyl-coenzyme A transferase, OXIDIZED COENZYME A
Authors:Ricagno, S, Jonsson, S, Richards, N.G, Lindqvist, Y.
Deposit date:2004-04-28
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes
J.Biol.Chem., 279, 2004
2Z9T
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BU of 2z9t by Molmil
Crystal structure of the human beta-2 microglobulin mutant W60G
Descriptor: Beta-2-microglobulin
Authors:Ricagno, S, Bolognesi, M, Bellotti, V, Corazza, A, Rennella, E, Gural, D, Mimmi, M.C, Betto, E, Pucillo, C, Fogolari, F, Viglino, P, Raimondi, S, Giorgetti, S, Bolognesi, B, Merlini, G, Stoppini, M.
Deposit date:2007-09-26
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The controlling roles of Trp60 and Trp95 in beta2-microglobulin function, folding and amyloid aggregation properties
J.Mol.Biol., 378, 2008
8CPE
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BU of 8cpe by Molmil
CryoEM structure of AL55 amyloid fibrils extracted from the kidney of an AL amyloidosis patient.
Descriptor: Immunoglobulin lambda light chain
Authors:Puri, S, Schulte, T, Chaves-Sanjuan, A, Ricagno, S.
Deposit date:2023-03-02
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The Cryo-EM STRUCTURE of Renal Amyloid Fibril Suggests Structurally Homogeneous Multiorgan Aggregation in AL Amyloidosis.
J.Mol.Biol., 435, 2023
7ZIR
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BU of 7zir by Molmil
Cryo-EM structure of hnRNPDL amyloid fibrils
Descriptor: Heterogeneous nuclear ribonucleoprotein D-like
Authors:Garcia-Pardo, J, Chaves-Sanjuan, A, Bartolome-Nafria, A, Gil-Garcia, M, Visentin, C, Bolognesi, M, Ricagno, S, Ventura, S.
Deposit date:2022-04-08
Release date:2022-12-28
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of hnRNPDL-2 fibrils, a functional amyloid associated with limb-girdle muscular dystrophy D3.
Nat Commun, 14, 2023
7ZH7
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BU of 7zh7 by Molmil
Cryo-EM structure of ex vivo AA amyloid from renal tissue of a short hair cat deceased in a shelter
Descriptor: Serum amyloid A protein
Authors:Schulte, T, Chaves-Sanjuan, A, Ricagno, S.
Deposit date:2022-04-05
Release date:2022-11-30
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of ex vivo fibrils associated with extreme AA amyloidosis prevalence in a cat shelter.
Nat Commun, 13, 2022
7ZS6
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BU of 7zs6 by Molmil
Crystal structure of Apis mellifera RidA
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Reactive intermediate deaminase A, ...
Authors:Visentin, C, Rizzi, G, Ricagno, S.
Deposit date:2022-05-06
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Apis mellifera RidA, a novel member of the canonical YigF/YER057c/UK114 imine deiminase superfamily of enzymes pre-empting metabolic damage.
Biochem.Biophys.Res.Commun., 616, 2022

 

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