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1SFK
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BU of 1sfk by Molmil
Core (C) protein from West Nile Virus, subtype Kunjin
Descriptor: CALCIUM ION, CHLORIDE ION, Core protein, ...
Authors:Dokland, T, Walsh, M, Mackenzie, J.M, Khromykh, A.A, Ee, K.-H, Wang, S.
Deposit date:2004-02-19
Release date:2004-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:West nile virus core protein; tetramer structure and ribbon formation
Structure, 12, 2004
1CD3
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BU of 1cd3 by Molmil
PROCAPSID OF BACTERIOPHAGE PHIX174
Descriptor: PROTEIN (CAPSID PROTEIN GPF), PROTEIN (SCAFFOLDING PROTEIN GPB), PROTEIN (SCAFFOLDING PROTEIN GPD), ...
Authors:Rossmann, M.G, Dokland, T.
Deposit date:1999-03-05
Release date:1999-04-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The role of scaffolding proteins in the assembly of the small, single-stranded DNA virus phiX174.
J.Mol.Biol., 288, 1999
1AL0
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BU of 1al0 by Molmil
PROCAPSID OF BACTERIOPHAGE PHIX174
Descriptor: CAPSID PROTEIN GPF, SCAFFOLDING PROTEIN GPB, SCAFFOLDING PROTEIN GPD, ...
Authors:Rossmann, M.G, Dokland, T.
Deposit date:1997-06-06
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of a viral procapsid with molecular scaffolding.
Nature, 389, 1997
7RWZ
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BU of 7rwz by Molmil
SaPIbov5 procapsid structure including size redirecting protein Ccm
Descriptor: Cos capsid morphogenesis protein (Ccm), Major capsid protein
Authors:Hawkins, N.C, Kizziah, J.L, Dokland, T.
Deposit date:2021-08-20
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Shape shifter: redirection of prolate phage capsid assembly by staphylococcal pathogenicity islands.
Nat Commun, 12, 2021
6V8I
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BU of 6v8i by Molmil
Composite atomic model of the Staphylococcus aureus phage 80alpha baseplate
Descriptor: Distal Tail Protein, gp58, FE (III) ION, ...
Authors:Kizziah, J.L, Dokland, T.
Deposit date:2019-12-11
Release date:2020-03-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the host cell recognition and penetration machinery of a Staphylococcus aureus bacteriophage.
Plos Pathog., 16, 2020
6C21
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BU of 6c21 by Molmil
Capsid protein in the Staphylococcus aureus phage 80alpha mature capsid
Descriptor: Major head protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2018-01-05
Release date:2018-01-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Cleavage and Structural Transitions during Maturation of Staphylococcus aureus Bacteriophage 80 alpha and SaPI1 Capsids.
Viruses, 9, 2017
8EGS
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BU of 8egs by Molmil
Tail knob structure of Staphylococcus phage Andhra
Descriptor: Lower collar protein, Major tail protein
Authors:Kizziah, J.L, Hawkins, N.C, Dokland, T.
Deposit date:2022-09-13
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
8EJ5
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BU of 8ej5 by Molmil
Tail tip structure of Staphylococcus phage Andhra
Descriptor: gp1, tail tip protein, gp10, ...
Authors:Kizziah, J.L, Hawkins, N.C, Dokland, T.
Deposit date:2022-09-16
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
8EGR
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BU of 8egr by Molmil
Upper tail structure of Staphylococcus phage Andhra
Descriptor: SGNH_hydro domain-containing protein, Upper collar protein, gp15, ...
Authors:Kizziah, J.L, Hawkins, N.C, Dokland, T.
Deposit date:2022-09-13
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
8EGT
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BU of 8egt by Molmil
Capsid structure of Staphylococcus phage Andhra
Descriptor: Major capsid protein, gp19, capsid lining protein
Authors:Hawkins, N.C, Kizziah, J.L, Dokland, T.
Deposit date:2022-09-13
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
8VDE
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BU of 8vde by Molmil
SaPI1 portal-capsid interface in mature capsids with DNA
Descriptor: Major capsid protein, Portal protein
Authors:Kizziah, J.L, Mukherjee, A, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VDC
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BU of 8vdc by Molmil
SaPI1 portal structure in mature capsids without DNA
Descriptor: Connector, Portal protein
Authors:Mukherjee, A, Kizziah, J.L, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8V8B
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BU of 8v8b by Molmil
Structure of 80alpha portal protein expressed in E. coli
Descriptor: Portal protein
Authors:Kizziah, J.L, Mukherjee, A, Dokland, T.
Deposit date:2023-12-05
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VD4
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BU of 8vd4 by Molmil
SaPI1 mature capsid structure containing DNA
Descriptor: Major head protein
Authors:Mukherjee, A, Kizziah, J.L, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VD8
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BU of 8vd8 by Molmil
SaPI1 portal structure in mature capsids containing DNA
Descriptor: Connector, Portal protein
Authors:Kizziah, J.L, Mukherjee, A, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VD5
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BU of 8vd5 by Molmil
SaPI1 mature capsid structure without DNA
Descriptor: Major capsid protein
Authors:Mukherjee, A, Kizziah, J.L, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
1IHM
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BU of 1ihm by Molmil
CRYSTAL STRUCTURE ANALYSIS OF NORWALK VIRUS CAPSID
Descriptor: capsid protein
Authors:Prasad, B.V, Hardy, M.E, Dokland, T, Bella, J, Rossmann, M.G, Estes, M.K.
Deposit date:2001-04-19
Release date:2001-05-16
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:X-ray crystallographic structure of the Norwalk virus capsid
Science, 286, 1999
7JW1
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BU of 7jw1 by Molmil
Satellite phage P4 procapsid including size determination (Sid) protein
Descriptor: Major capsid protein gpN, Size determination protein Sid
Authors:Kizziah, J.L, Dokland, T.
Deposit date:2020-08-24
Release date:2020-09-16
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (4.19 Å)
Cite:Structure of the Capsid Size-Determining Scaffold of "Satellite" Bacteriophage P4.
Viruses, 12, 2020
1P65
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BU of 1p65 by Molmil
Crystal structure of the nucleocapsid protein of porcine reproductive and respiratory syndrome virus (PRRSV)
Descriptor: nucleocapsid protein
Authors:Doan, D.N.P, Dokland, T.
Deposit date:2003-04-29
Release date:2003-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the nucleocapsid protein of porcine reproductive and respiratory syndrome virus.
Structure, 11, 2003
2I9F
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BU of 2i9f by Molmil
Structure of the equine arterivirus nucleocapsid protein
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, GLYCEROL, ...
Authors:Deshpande, A, Wang, S, Walsh, M, Dokland, T.
Deposit date:2006-09-05
Release date:2007-05-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the equine arteritis virus nucleocapsid protein reveals a dimer-dimer arrangement.
Acta Crystallogr.,Sect.D, 63, 2007
2L8T
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BU of 2l8t by Molmil
Staphylococcus aureus pathogenicity island 1 protein gp6, an internal scaffold in size determination
Descriptor: Transposon Tn557 toxic shock syndrome toxin-1
Authors:Dearborn, A.D, Spilman, M.S, Damle, P.K, Chang, J.R, Monroe, E.B, Saad, J.S, Christie, G.E, Dokland, T.
Deposit date:2011-01-24
Release date:2011-08-17
Last modified:2011-09-28
Method:SOLUTION NMR
Cite:The Staphylococcus aureus Pathogenicity Island 1 Protein gp6 Functions as an Internal Scaffold during Capsid Size Determination.
J.Mol.Biol., 412, 2011
6B0X
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BU of 6b0x by Molmil
Capsid protein and C-terminal part of scaffolding protein in the Staphylococcus aureus phage 80alpha procapsid
Descriptor: Major head protein, Scaffold protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2017-09-15
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Elife, 6, 2017
6B23
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BU of 6b23 by Molmil
Capsid protein and C-terminal part of CpmB protein in the Staphylococcus aureus pathogenicity island 1 80alpha-derived procapsid
Descriptor: Capsid morphogenesis B protein, Major head protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2017-09-19
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Elife, 6, 2017
6C22
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BU of 6c22 by Molmil
Capsid protein in the Staphylococcus aureus phage 80alpha-derived SaPI1 mature capsid
Descriptor: Major head protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2018-01-05
Release date:2018-01-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:Cleavage and Structural Transitions during Maturation of Staphylococcus aureus Bacteriophage 80 alpha and SaPI1 Capsids.
Viruses, 9, 2017
1P2X
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BU of 1p2x by Molmil
CRYSTAL STRUCTURE OF THE CALPONIN-HOMOLOGY DOMAIN OF RNG2 FROM SCHIZOSACCHAROMYCES POMBE
Descriptor: BROMIDE ION, Ras GTPase-activating-like protein
Authors:Wang, C.-H, Balasubramanian, M.K, Dokland, T.
Deposit date:2003-04-16
Release date:2004-06-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure, crystal packing and molecular dynamics of the calponin-homology domain of Schizosaccharomyces pombe Rng2.
Acta Crystallogr.,Sect.D, 60, 2004

 

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