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4WT8
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BU of 4wt8 by Molmil
Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
Descriptor: 23S rRNA (2899-MER), 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Amunts, A, Fiedorczuk, K, Ramakrishnan, V.
Deposit date:2014-10-29
Release date:2015-01-21
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics.
J.Mol.Biol., 427, 2015
2O01
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BU of 2o01 by Molmil
The Structure of a plant photosystem I supercomplex at 3.4 Angstrom resolution
Descriptor: AT3g54890, BETA-CAROTENE, CHLOROPHYLL A, ...
Authors:Amunts, A, Drory, O, Nelson, N.
Deposit date:2006-11-27
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The structure of a plant photosystem I supercomplex at 3.4 A resolution.
Nature, 447, 2007
2WSC
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BU of 2wsc by Molmil
Improved Model of Plant Photosystem I
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ...
Authors:Amunts, A, Toporik, H, Borovikov, A, Nelson, N.
Deposit date:2009-09-04
Release date:2009-11-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure Determination and Improved Model of Plant Photosystem I.
J.Biol.Chem., 285, 2010
2WSE
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BU of 2wse by Molmil
Improved Model of Plant Photosystem I
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ...
Authors:Amunts, A, Toporik, H, Borovikov, A, Nelson, N.
Deposit date:2009-09-05
Release date:2009-11-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure determination and improved model of plant photosystem I
J. Biol. Chem., 285, 2010
2WSF
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BU of 2wsf by Molmil
Improved Model of Plant Photosystem I
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, AT3G54890, BETA-CAROTENE, ...
Authors:Amunts, A, Toporik, H, Borovikov, A, Nelson, N.
Deposit date:2009-09-05
Release date:2009-11-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Structure determination and improved model of plant photosystem I.
J. Biol. Chem., 285, 2010
3J9M
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BU of 3j9m by Molmil
Structure of the human mitochondrial ribosome (class 1)
Descriptor: 12S rRNA, 16S rRNA, E-site tRNA, ...
Authors:Amunts, A, Brown, A, Toots, J, Scheres, S.H, Ramakrishnan, V.
Deposit date:2015-02-08
Release date:2015-04-15
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ribosome. The structure of the human mitochondrial ribosome.
Science, 348, 2015
3J6B
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BU of 3j6b by Molmil
Structure of the yeast mitochondrial large ribosomal subunit
Descriptor: 21S ribosomal RNA, 54S ribosomal protein IMG1, mitochondrial, ...
Authors:Amunts, A, Brown, A, Bai, X.C, Llacer, J.L, Hussain, T, Emsley, P, Long, F, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V.
Deposit date:2014-01-22
Release date:2014-04-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the yeast mitochondrial large ribosomal subunit.
Science, 343, 2014
6YWS
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BU of 6yws by Molmil
The structure of the large subunit of the mitoribosome from Neurospora crassa
Descriptor: 50S ribosomal protein L14, 50S ribosomal protein L17, 50S ribosomal protein L24, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWY
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BU of 6ywy by Molmil
The structure of the mitoribosome from Neurospora crassa with bound tRNA at the P-site
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWX
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BU of 6ywx by Molmil
The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWE
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BU of 6ywe by Molmil
The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-29
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YWV
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BU of 6ywv by Molmil
The structure of the Atp25 bound assembly intermediate of the mitoribosome from Neurospora crassa
Descriptor: 23 S rRNA, 50S ribosomal protein L14, 50S ribosomal protein L17, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-30
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6YW5
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BU of 6yw5 by Molmil
The structure of the small subunit of the mitoribosome from Neurospora crassa
Descriptor: 16S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-29
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
7ZQ9
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BU of 7zq9 by Molmil
Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded)
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Naschberger, A, Amunts, A.
Deposit date:2022-04-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
7ZQD
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BU of 7zqd by Molmil
Dimeric PSI of Chlamydomonas reinhardtii at 2.97 A resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Naschberger, A, Amunts, A.
Deposit date:2022-04-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
7ZQE
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BU of 7zqe by Molmil
Plastocyanin bound to PSI of Chlamydomonas reinhardtii
Descriptor: COPPER (II) ION, Plastocyanin, chloroplastic
Authors:Naschberger, A, Amunts, A.
Deposit date:2022-04-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
7ZQC
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BU of 7zqc by Molmil
Monomeric PSI of Chlamydomonas reinhardtii at 2.31 A resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Naschberger, A, Amunts, A.
Deposit date:2022-04-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
8A22
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BU of 8a22 by Molmil
Structure of the mitochondrial ribosome from Polytomella magna
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Tobiasson, V, Berzina, I, Amunts, A.
Deposit date:2022-06-02
Release date:2022-11-16
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Nat Commun, 13, 2022
6ERI
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BU of 6eri by Molmil
Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10 alpha, ...
Authors:Perez Borema, A, Aibara, S, Paul, B, Tobiasson, V, Kimanius, D, Forsberg, B.O, Wallden, K, Lindahl, E, Amunts, A.
Deposit date:2017-10-18
Release date:2018-04-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor.
Nat Plants, 4, 2018
7QI4
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BU of 7qi4 by Molmil
Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA)
Descriptor: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ...
Authors:Singh, V, Itoh, Y, Amunts, A.
Deposit date:2021-12-14
Release date:2022-07-13
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (2.21 Å)
Cite:Structure of mitoribosome reveals mechanism of mRNA binding, tRNA interactions with L1 stalk, roles of cofactors and rRNA modifications.
Biorxiv, 2023
7QI6
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BU of 7qi6 by Molmil
Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution
Descriptor: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ...
Authors:Singh, V, Itoh, Y, Amunts, A.
Deposit date:2021-12-14
Release date:2023-05-17
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structure of mitoribosome reveals mechanism of mRNA binding, tRNA interactions with L1 stalk, roles of cofactors and rRNA modifications.
Biorxiv, 2023
8OM4
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BU of 8om4 by Molmil
Small subunit of yeast mitochondrial ribosome.
Descriptor: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
Deposit date:2023-03-31
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM2
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BU of 8om2 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.
Descriptor: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
Deposit date:2023-03-31
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM3
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BU of 8om3 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.
Descriptor: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
Authors:Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
Deposit date:2023-03-31
Release date:2024-01-10
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
6RHZ
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BU of 6rhz by Molmil
Structure of a minimal photosystem I from a green alga
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Perez Boerema, A, Klaiman, D, Caspy, I, Netzer-El, S.Y, Amunts, A, Nelson, N.
Deposit date:2019-04-23
Release date:2020-02-19
Last modified:2020-03-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of a minimal photosystem I from the green alga Dunaliella salina.
Nat.Plants, 6, 2020

217705

PDB entries from 2024-03-27

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