Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
354D
DownloadVisualize
BU of 354d by Molmil
Structure of loop E FROM E. coli 5S RRNA
Descriptor: MAGNESIUM ION, RNA (5'-R(*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*G)-3'), RNA-DNA (5'-R(*GP*CP*GP*AP*GP*AP*GP*UP*AP*)-D(*DGP(S)*)-R(*GP*C)-3')
Authors:Correll, C.C, Freeborn, B, Moore, P.B, Steitz, T.A.
Deposit date:1997-10-01
Release date:1997-11-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.
Cell(Cambridge,Mass.), 91, 1997
357D
DownloadVisualize
BU of 357d by Molmil
3.5 A structure of fragment I from E. coli 5S RRNA
Descriptor: MAGNESIUM ION, MERCURY (II) ION, RNA (5'-R(*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*G P*GP*AP*AP*CP*UP* GP*CP*CP*AP*GP*GP*CP*AP*U)-3'), ...
Authors:Correll, C.C, Freeborn, B, Moore, P.B, Steitz, T.A.
Deposit date:1997-10-09
Release date:1997-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.
Cell(Cambridge,Mass.), 91, 1997
1A51
DownloadVisualize
BU of 1a51 by Molmil
LOOP D/LOOP E ARM OF E. COLI 5S RRNA, NMR, 9 STRUCTURES
Descriptor: 5S RRNA LOOP D/LOOP E
Authors:Dallas, A, Moore, P.B.
Deposit date:1998-02-19
Release date:1998-05-27
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The loop E-loop D region of Escherichia coli 5S rRNA: the solution structure reveals an unusual loop that may be important for binding ribosomal proteins.
Structure, 5, 1997
1A4D
DownloadVisualize
BU of 1a4d by Molmil
LOOP D/LOOP E ARM OF ESCHERICHIA COLI 5S RRNA, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: RNA (5'-R(*GP*GP*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*GP*UP*GP*GP*GP*GP*UP*C)-3'), RNA (5'-R(P*UP*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*GP*CP*C)-3')
Authors:Dallas, A, Moore, P.B.
Deposit date:1998-01-29
Release date:1998-04-29
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The loop E-loop D region of Escherichia coli 5S rRNA: the solution structure reveals an unusual loop that may be important for binding ribosomal proteins.
Structure, 5, 1997
1A9L
DownloadVisualize
BU of 1a9l by Molmil
SOLUTION STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, NMR, 12 STRUCTURES
Descriptor: PRE-TRNA BULGE-HELIX-BULGE MOTIF
Authors:Diener, J.L, Moore, P.B.
Deposit date:1998-04-07
Release date:1998-06-17
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of a substrate for the archaeal pre-tRNA splicing endonucleases: the bulge-helix-bulge motif.
Mol.Cell, 1, 1998
364D
DownloadVisualize
BU of 364d by Molmil
3.0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA
Descriptor: MAGNESIUM ION, RNA (5'-R(*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*G P*GP*AP*AP*CP*UP*GP*CP*CP*AP*GP*GP*CP*AP*U)-3'), RNA (5'-R(*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*GP*UP*GP*GP*GP*G *UP*C)-3'), ...
Authors:Correll, C.C, Freeborn, B, Moore, P.B, Steitz, T.A.
Deposit date:1997-12-08
Release date:1998-01-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.
Cell(Cambridge,Mass.), 91, 1997
1C04
DownloadVisualize
BU of 1c04 by Molmil
IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI
Descriptor: 23S RRNA FRAGMENT, RIBOSOMAL PROTEIN L11, RIBOSOMAL PROTEIN L14, ...
Authors:Ban, N, Nissen, P, Capel, M, Moore, P.B, Steitz, T.A.
Deposit date:1999-07-14
Release date:1999-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (5 Å)
Cite:Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
Nature, 400, 1999
1FFK
DownloadVisualize
BU of 1ffk by Molmil
CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Ban, N, Nissen, P, Hansen, J, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-25
Release date:2000-08-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
Science, 289, 2000
1FG0
DownloadVisualize
BU of 1fg0 by Molmil
LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND
Descriptor: 23S RIBOSOMAL RNA, 5'-R(CCGGCGGGCUGGUUCAAACCGGCCCGCCGGACC)-3'-5'-R(P-PUROMYCIN)-3'
Authors:Nissen, P, Hansen, J, Ban, N, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-26
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structural basis of ribosome activity in peptide bond synthesis.
Science, 289, 2000
1FFZ
DownloadVisualize
BU of 1ffz by Molmil
LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH R(CC)-DA-PUROMYCIN
Descriptor: 23S RIBOSOMAL RNA, R(P*CP*C*)-D(P*A)-R(P*(PU))
Authors:Nissen, P, Hansen, J, Ban, N, Moore, P.B, Steitz, T.A.
Deposit date:2000-07-26
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structural basis of ribosome activity in peptide bond synthesis.
Science, 289, 2000
3G6E
DownloadVisualize
BU of 3g6e by Molmil
Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit
Descriptor: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 23S ribosomal RNA, 50S ribosomal protein L10E, ...
Authors:Gurel, G, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2009-02-06
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
J.Mol.Biol., 389, 2009
3G71
DownloadVisualize
BU of 3g71 by Molmil
Co-crystal structure of Bruceantin bound to the large ribosomal subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2009-02-09
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
J.Mol.Biol., 389, 2009
3G4S
DownloadVisualize
BU of 3g4s by Molmil
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2009-02-04
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
J.Mol.Biol., 389, 2009
3I55
DownloadVisualize
BU of 3i55 by Molmil
Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Steitz, T.A, Moore, P.B.
Deposit date:2009-07-03
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structures of triacetyloleandomycin and mycalamide A bind to the large ribosomal subunit of Haloarcula marismortui.
Antimicrob.Agents Chemother., 53, 2009
3I56
DownloadVisualize
BU of 3i56 by Molmil
Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Steitz, T.A, Moore, P.B.
Deposit date:2009-07-03
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of triacetyloleandomycin and mycalamide A bind to the large ribosomal subunit of Haloarcula marismortui.
Antimicrob.Agents Chemother., 53, 2009
1K73
DownloadVisualize
BU of 1k73 by Molmil
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Descriptor: 23S RRNA, 5S RRNA, ANISOMYCIN, ...
Authors:Hansen, J, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
Deposit date:2001-10-18
Release date:2003-07-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
1K8A
DownloadVisualize
BU of 1k8a by Molmil
Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.
Deposit date:2001-10-23
Release date:2002-07-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
1KC8
DownloadVisualize
BU of 1kc8 by Molmil
Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Descriptor: 23S RRNA, 5S RRNA, BLASTICIDIN S, ...
Authors:Hansen, J.L, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
Deposit date:2001-11-07
Release date:2003-07-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
1MNX
DownloadVisualize
BU of 1mnx by Molmil
The Solution Structure of the Loop E Region of the 5S rRNA from Spinach Chloroplasts.
Descriptor: Loop E from 5S rRNA
Authors:Vallurupalli, P, Moore, P.B.
Deposit date:2002-09-06
Release date:2003-01-14
Last modified:2016-05-25
Method:SOLUTION NMR
Cite:The Solution Structure of the Loop E Region of the 5S rRNA from Spinach Chloroplasts
J.Mol.Biol., 325, 2003
1SCL
DownloadVisualize
BU of 1scl by Molmil
THE SARCIN-RICIN LOOP, A MODULAR RNA
Descriptor: RNA SARCIN-RICIN LOOP
Authors:Szewczak, A.A, Moore, P.B.
Deposit date:1994-11-11
Release date:1995-01-26
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The conformation of the sarcin/ricin loop from 28S ribosomal RNA.
Proc.Natl.Acad.Sci.USA, 90, 1993
1U3K
DownloadVisualize
BU of 1u3k by Molmil
The solution structure of a substrate of archaeal pre-tRNA splicing endonucleases
Descriptor: ABISS7
Authors:Pollock, E.C, Moore, P.B.
Deposit date:2004-07-22
Release date:2005-07-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The solution structure of a substrate of archaeal pre-tRNA splicing endonucleases
To be Published
1YJ9
DownloadVisualize
BU of 1yj9 by Molmil
Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22
Descriptor: 23S Ribosomal RNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L11P, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-13
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.
Cell(Cambridge,Mass.), 121, 2005
1YJN
DownloadVisualize
BU of 1yjn by Molmil
Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui
Descriptor: 23S Ribosomal RNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L11P, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-14
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.
Cell(Cambridge,Mass.), 121, 2005
1YJW
DownloadVisualize
BU of 1yjw by Molmil
Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10, 50S ribosomal protein L10e, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-15
Release date:2005-04-26
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of Mlsbk Antibiotics Bound to Mutated Large Ribosomal Subunits Provide a Structural Explanation for Resistance.
Cell(Cambridge,Mass.), 121, 2005
2A9L
DownloadVisualize
BU of 2a9l by Molmil
SOLUTION NMR STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, MINIMIZED AVERAGE STRUCTURE
Descriptor: ABISS7 RNA
Authors:Diener, J.L, Moore, P.B.
Deposit date:1998-04-07
Release date:1998-06-17
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of a substrate for the archaeal pre-tRNA splicing endonucleases: the bulge-helix-bulge motif.
Mol.Cell, 1, 1998

 

1234>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon