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8AMV
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BU of 8amv by Molmil
RepB pMV158 hexamer
Descriptor: PHOSPHATE ION, Replication protein RepB, SODIUM ION
Authors:Machon, C, Amodio, J, Boer, R.D, Ruiz-Maso, J.A, del Solar, G, Coll, M.
Deposit date:2022-08-04
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structures of pMV158 replication initiator RepB with and without DNA reveal a flexible dual-function protein.
Nucleic Acids Res., 51, 2023
8AMT
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BU of 8amt by Molmil
OBD-RepB pMV158 domain
Descriptor: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Machon, C, Amodio, J, Boer, R.D, Ruiz-Maso, J.A, del Solar, G, Coll, M.
Deposit date:2022-08-04
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of pMV158 replication initiator RepB with and without DNA reveal a flexible dual-function protein.
Nucleic Acids Res., 51, 2023
6RVR
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BU of 6rvr by Molmil
Atomic structure of the Epstein-Barr portal, structure I
Descriptor: Portal protein
Authors:Machon, C, Fabrega-Ferrer, M, Zhou, D, Cuervo, A, Carrascosa, J.L, Stuart, D.I, Coll, M.
Deposit date:2019-05-31
Release date:2019-09-18
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Atomic structure of the Epstein-Barr virus portal.
Nat Commun, 10, 2019
6RVS
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BU of 6rvs by Molmil
Atomic structure of the Epstein-Barr portal, structure II
Descriptor: Portal protein
Authors:Machon, C, Fabrega-Ferrer, M, Zhou, D, Cuervo, A, Carrascosa, J.L, Stuart, D.I, Coll, M.
Deposit date:2019-05-31
Release date:2019-09-18
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Atomic structure of the Epstein-Barr virus portal.
Nat Commun, 10, 2019
8AMU
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BU of 8amu by Molmil
RepB pMV158 OBD domain bound to DDR region
Descriptor: DNA (5'-D(*AP*AP*AP*AP*GP*TP*CP*GP*CP*CP*GP*AP*AP*AP*AP*GP*TP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(*TP*CP*GP*GP*CP*GP*AP*CP*TP*TP*TP*TP*CP*GP*GP*CP*GP*AP*CP*TP*TP*TP*T)-3'), MANGANESE (II) ION, ...
Authors:Amodio, J, Machon, C, Boer, R.D, Ruiz-Maso, J.A, del Solar, G, Coll, M.
Deposit date:2022-08-04
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of pMV158 replication initiator RepB with and without DNA reveal a flexible dual-function protein.
Nucleic Acids Res., 51, 2023
6TJP
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BU of 6tjp by Molmil
Crystal structure of T7 bacteriophage portal protein, 13mer, closed valve - P212121
Descriptor: Portal protein
Authors:Fabrega-Ferrer, M, Cuervo, A, Fernandez, F.J, Machon, C, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
Deposit date:2019-11-26
Release date:2020-12-16
Last modified:2021-06-30
Method:X-RAY DIFFRACTION (3.74 Å)
Cite:Using a partial atomic model from medium-resolution cryo-EM to solve a large crystal structure.
Acta Crystallogr D Struct Biol, 77, 2021
6EY7
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BU of 6ey7 by Molmil
Human cytomegalovirus terminase nuclease domain, Mn soaked, inhibitor bound
Descriptor: 4-[(4-fluorophenyl)methyl-methyl-amino]-2,4-bis(oxidanylidene)butanoic acid, CHLORIDE ION, MANGANESE (II) ION, ...
Authors:Bongarzone, S, Nadal, M, Kaczmarska, Z, Machon, C, Alvarez, M, Albericio, F, Coll, M.
Deposit date:2017-11-10
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-Driven Discovery of alpha , gamma-Diketoacid Inhibitors Against UL89 Herpesvirus Terminase.
Acs Omega, 3, 2018
6QXM
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BU of 6qxm by Molmil
Cryo-EM structure of T7 bacteriophage portal protein, 12mer, open valve
Descriptor: Portal protein
Authors:Fabrega-Ferrer, M, Cuervo, A, Machon, C, Fernandez, F.J, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
Deposit date:2019-03-07
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structures of T7 bacteriophage portal and tail suggest a viral DNA retention and ejection mechanism.
Nat Commun, 10, 2019
6QWP
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BU of 6qwp by Molmil
Crystal structure of T7 bacteriophage portal protein, 13mer, closed valve
Descriptor: Portal protein
Authors:Fabrega-Ferrer, M, Cuervo, A, Machon, C, Fernandez, F.J, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
Deposit date:2019-03-06
Release date:2019-09-04
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structures of T7 bacteriophage portal and tail suggest a viral DNA retention and ejection mechanism.
Nat Commun, 10, 2019
6QX5
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BU of 6qx5 by Molmil
Crystal structure of T7 bacteriophage portal protein, 12mer, closed valve
Descriptor: Portal protein
Authors:Fabrega-Ferrer, M, Cuervo, A, Machon, C, Fernandez, F.J, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
Deposit date:2019-03-07
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of T7 bacteriophage portal and tail suggest a viral DNA retention and ejection mechanism.
Nat Commun, 10, 2019
6R21
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BU of 6r21 by Molmil
Cryo-EM structure of T7 bacteriophage fiberless tail complex
Descriptor: Portal protein, Tail tubular protein gp11, Tail tubular protein gp12
Authors:Cuervo, A, Fabrega-Ferrer, M, Machon, C, Conesa, J.J, Perez-Ruiz, M, Coll, M, Carrascosa, J.L.
Deposit date:2019-03-15
Release date:2019-09-04
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structures of T7 bacteriophage portal and tail suggest a viral DNA retention and ejection mechanism.
Nat Commun, 10, 2019
4U87
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BU of 4u87 by Molmil
Crystal structure of the Ba-soaked C2 crystal form of pMV158 replication initiator RepB (P3221 space group)
Descriptor: BARIUM ION, CHLORIDE ION, MANGANESE (II) ION, ...
Authors:Boer, D.R, Ruiz Maso, J.A, del Solar, G, Coll, M.
Deposit date:2014-08-01
Release date:2015-08-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Conformational plasticity of RepB, the replication initiator protein of promiscuous streptococcal plasmid pMV158.
Sci Rep, 6, 2016

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