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5O09
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BU of 5o09 by Molmil
BtubABC mini microtubule
Descriptor: Bacterial kinesin light chain, GUANOSINE-5'-DIPHOSPHATE, Tubulin, ...
Authors:Deng, X, Bharat, T.A.M, Lowe, J.
Deposit date:2017-05-16
Release date:2017-07-19
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Four-stranded mini microtubules formed by Prosthecobacter BtubAB show dynamic instability.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2Z6K
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BU of 2z6k by Molmil
Crystal structure of full-length human RPA14/32 heterodimer
Descriptor: Replication protein A 14 kDa subunit, Replication protein A 32 kDa subunit
Authors:Deng, X, Habel, J.E, Kabaleeswaran, V, Borgstahl, G.E.
Deposit date:2007-08-03
Release date:2007-12-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Full-length Human RPA14/32 Complex Gives Insights into the Mechanism of DNA Binding and Complex Formation
J.Mol.Biol., 374, 2007
6RIB
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BU of 6rib by Molmil
Cryo-EM reconstruction of Thermus thermophilus bactofilin double helical filaments
Descriptor: bactofilin
Authors:Deng, X, Lowe, J.
Deposit date:2019-04-23
Release date:2019-07-17
Last modified:2020-02-05
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The structure of bactofilin filaments reveals their mode of membrane binding and lack of polarity.
Nat Microbiol, 4, 2019
3N29
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BU of 3n29 by Molmil
Crystal structure of carboxynorspermidine decarboxylase complexed with Norspermidine from Campylobacter jejuni
Descriptor: Carboxynorspermidine decarboxylase, GLYCEROL, N-(3-aminopropyl)propane-1,3-diamine, ...
Authors:Deng, X, Lee, J, Michael, A.J, Tomchick, D.R, Goldsmith, E.J, Phillips, M.A.
Deposit date:2010-05-17
Release date:2010-06-09
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution of substrate specificity within a diverse family of beta/alpha-barrel-fold basic amino acid decarboxylases: X-ray structure determination of enzymes with specificity for L-arginine and carboxynorspermidine.
J.Biol.Chem., 285, 2010
3N2O
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BU of 3n2o by Molmil
X-ray crystal structure of arginine decarboxylase complexed with Arginine from Vibrio vulnificus
Descriptor: AGMATINE, Biosynthetic arginine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Deng, X, Lee, J, Michael, A.J, Tomchick, D.R, Goldsmith, E.J, Phillips, M.A.
Deposit date:2010-05-18
Release date:2010-06-09
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of substrate specificity within a diverse family of beta/alpha-barrel-fold basic amino acid decarboxylases: X-ray structure determination of enzymes with specificity for L-arginine and carboxynorspermidine.
J.Biol.Chem., 285, 2010
3S84
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BU of 3s84 by Molmil
Dimeric apoA-IV
Descriptor: Apolipoprotein A-IV, SULFATE ION
Authors:Deng, X, Davidson, W.S, Thompson, T.B.
Deposit date:2011-05-27
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structure of Dimeric Apolipoprotein A-IV and Its Mechanism of Self-Association.
Structure, 20, 2012
2PQA
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BU of 2pqa by Molmil
Crystal Structure of Full-length Human RPA 14/32 Heterodimer
Descriptor: Replication protein A 14 kDa subunit, Replication protein A 32 kDa subunit
Authors:Deng, X, Borgstahl, G.E.
Deposit date:2007-05-01
Release date:2007-11-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the full-length human RPA14/32 complex gives insights into the mechanism of DNA binding and complex formation.
J.Mol.Biol., 374, 2007
2PI2
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BU of 2pi2 by Molmil
Full-length Replication protein A subunits RPA14 and RPA32
Descriptor: 1,4-DIETHYLENE DIOXIDE, Replication protein A 14 kDa subunit, Replication protein A 32 kDa subunit
Authors:Deng, X, Borgstahl, G.E.
Deposit date:2007-04-12
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Full-length Human RPA14/32 Complex Gives Insights into the Mechanism of DNA Binding and Complex Formation.
J.Mol.Biol., 374, 2007
5DV0
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BU of 5dv0 by Molmil
Structure of S. pneumoniae D39 sortase A
Descriptor: Sortase SrtA
Authors:Deng, X.
Deposit date:2015-09-21
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.299 Å)
Cite:Structure of S. pneumoniae D39 Sortase A
To Be Published
3I6R
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BU of 3i6r by Molmil
Plasmodium falciparum dihydroorotate dehydrogenase bound with triazolopyrimidine-based inhibitor DSM74
Descriptor: 5-methyl-N-[4-(trifluoromethyl)phenyl][1,2,4]triazolo[1,5-a]pyrimidin-7-amine, Dihydroorotate dehydrogenase homolog, mitochondrial, ...
Authors:Deng, X, Phillips, M.A.
Deposit date:2009-07-07
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural plasticity of malaria dihydroorotate dehydrogenase allows selective binding of diverse chemical scaffolds.
J.Biol.Chem., 284, 2009
3I65
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BU of 3i65 by Molmil
Plasmodium falciparum dihydroorotate dehydrogenase bound with triazolopyrimidine-based inhibitor DSM1
Descriptor: 5-methyl-7-(naphthalen-2-ylamino)-1H-[1,2,4]triazolo[1,5-a]pyrimidine-3,8-diium, Dihydroorotate dehydrogenase homolog, mitochondrial, ...
Authors:Deng, X, Phillips, M.A.
Deposit date:2009-07-06
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural plasticity of malaria dihydroorotate dehydrogenase allows selective binding of diverse chemical scaffolds.
J.Biol.Chem., 284, 2009
3I68
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BU of 3i68 by Molmil
Plasmodium falciparum dihydroorotate dehydrogenase bound with triazolopyrimidine-based inhibitor DSM2
Descriptor: Dihydroorotate dehydrogenase homolog, mitochondrial, FLAVIN MONONUCLEOTIDE, ...
Authors:Deng, X, Phillips, M.A.
Deposit date:2009-07-06
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural plasticity of malaria dihydroorotate dehydrogenase allows selective binding of diverse chemical scaffolds.
J.Biol.Chem., 284, 2009
4ORI
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BU of 4ori by Molmil
Rat dihydroorotate dehydrogenase bound with DSM338 (N-[3,5-difluoro-4-(trifluoromethyl)phenyl]-5-methyl-2-(trifluoromethyl)[1,2,4]triazolo[1,5-a]pyrimidin-7-amine)
Descriptor: Dihydroorotate dehydrogenase (quinone), mitochondrial, FLAVIN MONONUCLEOTIDE, ...
Authors:Deng, X, Phillips, M.A.
Deposit date:2014-02-11
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Fluorine Modulates Species Selectivity in the Triazolopyrimidine Class of Plasmodium falciparum Dihydroorotate Dehydrogenase Inhibitors.
J.Med.Chem., 57, 2014
4OQV
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BU of 4oqv by Molmil
High resolution crystal structure of human dihydroorotate dehydrogenase bound with DSM338 (N-[3,5-difluoro-4-(trifluoromethyl)phenyl]-5-methyl-2-(trifluoromethyl)[1,2,4]triazolo[1,5-a]pyrimidin-7-amine)
Descriptor: ACETIC ACID, Dihydroorotate dehydrogenase (quinone), mitochondrial, ...
Authors:Deng, X, Phillips, M.A.
Deposit date:2014-02-10
Release date:2014-06-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Fluorine Modulates Species Selectivity in the Triazolopyrimidine Class of Plasmodium falciparum Dihydroorotate Dehydrogenase Inhibitors.
J.Med.Chem., 57, 2014
4ORM
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BU of 4orm by Molmil
Crystal structure of Plasmodium falciparum dihydroorotate dehydrogenase bound with Inhibitor DSM338 (N-[3,5-difluoro-4-(trifluoromethyl)phenyl]-5-methyl-2-(trifluoromethyl)[1,2,4]triazolo[1,5-a]pyrimidin-7-amine)
Descriptor: Dihydroorotate dehydrogenase (quinone), mitochondrial, FLAVIN MONONUCLEOTIDE, ...
Authors:Deng, X, Phillips, M.A.
Deposit date:2014-02-11
Release date:2014-06-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Fluorine Modulates Species Selectivity in the Triazolopyrimidine Class of Plasmodium falciparum Dihydroorotate Dehydrogenase Inhibitors.
J.Med.Chem., 57, 2014
6LFB
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BU of 6lfb by Molmil
E. coli Thioesterase I mutant DG
Descriptor: Acyl-CoA thioesterase I also functions as protease I
Authors:Deng, X, Chen, L, Yang, G.
Deposit date:2019-12-01
Release date:2020-07-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure-guided reshaping of the acyl binding pocket of 'TesA thioesterase enhances octanoic acid production in E. coli.
Metab. Eng., 61, 2020
6LFC
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BU of 6lfc by Molmil
E. coli Thioesterase I mutant DG
Descriptor: Acyl-CoA thioesterase I also functions as protease I
Authors:Deng, X, Chen, L, Yang, G.
Deposit date:2019-12-01
Release date:2020-07-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-guided reshaping of the acyl binding pocket of 'TesA thioesterase enhances octanoic acid production in E. coli.
Metab. Eng., 61, 2020
8JFU
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BU of 8jfu by Molmil
AcrIIA15 in complex with palindromic DNA substrate
Descriptor: AcrIIA15, DNA (5'-D(*AP*TP*TP*AP*TP*GP*AP*CP*AP*AP*AP*TP*GP*TP*CP*AP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*TP*GP*AP*CP*AP*TP*TP*TP*GP*TP*CP*AP*TP*AP*A)-3')
Authors:Deng, X, Wang, Y.
Deposit date:2023-05-18
Release date:2024-02-28
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:AcrIIA15 in complex with palindromic DNA substrate
To Be Published
8JFT
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BU of 8jft by Molmil
Cryo-EM structure of SaCas9-AcrIIA15 CTD-sgRNA complex
Descriptor: AcrIIA15, CRISPR-associated endonuclease Cas9, sgRNA of SaCas9
Authors:Deng, X, Wang, Y.
Deposit date:2023-05-18
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Cryo-EM structure of SaCas9-AcrIIA15 CTD-sgRNA complex
To Be Published
8JFR
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BU of 8jfr by Molmil
N-terminal domain of AcrIIA15 in complex with palindromic DNA substrate
Descriptor: AcrIIA15, DNA (5'-D(*AP*TP*TP*AP*TP*GP*AP*CP*AP*AP*AP*TP*GP*TP*CP*AP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*TP*GP*AP*CP*AP*TP*TP*TP*GP*TP*CP*AP*TP*AP*A)-3')
Authors:Deng, X, Wang, Y.
Deposit date:2023-05-18
Release date:2024-02-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:N-terminal domain of AcrIIA15 in complex with palindromic DNA substrate
To Be Published
8JFO
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BU of 8jfo by Molmil
Crystal structure of anti-CRISPR protein AcrIIA15
Descriptor: AcrIIA15
Authors:Deng, X, Wang, Y.
Deposit date:2023-05-18
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of anti-CRISPR protein AcrIIA15
To Be Published
8JG9
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BU of 8jg9 by Molmil
Cryo-EM structure of the SaCas9-sgRNA-AcrIIA15-promoter DNA dimer
Descriptor: AcrIIA15, CRISPR-associated endonuclease Cas9, DNA (25-MER), ...
Authors:Deng, X, Wang, Y.
Deposit date:2023-05-20
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Cryo-EM structure of the SaCas9-sgRNA-AcrIIA15-promoter DNA dimer
To Be Published
5O01
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BU of 5o01 by Molmil
Crystal structure of BtubC (BKLC) from P. vanneervenii
Descriptor: BKLC (bacterial kinesin-light chain-like)
Authors:Lowe, J, Deng, X.
Deposit date:2017-05-15
Release date:2017-07-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Four-stranded mini microtubules formed by Prosthecobacter BtubAB show dynamic instability.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4Q2V
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BU of 4q2v by Molmil
Crystal Structure of Ricin A chain complexed with Baicalin inhibitor
Descriptor: 5,6-dihydroxy-4-oxo-2-phenyl-4H-chromen-7-yl beta-D-glucopyranosiduronic acid, Ricin
Authors:Deng, X, Li, X, Dong, J, Chen, Y.
Deposit date:2014-04-10
Release date:2015-04-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Baicalin inhibits the lethality of ricin in mice by inducing protein oligomerization.
J.Biol.Chem., 290, 2015
4QEI
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BU of 4qei by Molmil
Two distinct conformational states of GlyRS captured in crystal lattice
Descriptor: ADENOSINE MONOPHOSPHATE, Glycine--tRNA ligase, tRNA-Gly-CCC-2-2
Authors:Xie, W, Qin, X, Deng, X, Zhang, Q, Li, Q.
Deposit date:2014-05-16
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.875 Å)
Cite:Large Conformational Changes of Insertion 3 in Human Glycyl-tRNA Synthetase (hGlyRS) during Catalysis
J.Biol.Chem., 291, 2016

217705

PDB entries from 2024-03-27

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