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2EFC
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BU of 2efc by Molmil
Ara7-GDP/AtVps9a
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Similarity to vacuolar protein sorting-associated protein VPS9, Small GTP-binding protein-like
Authors:Uejima, T, Ihara, K, Goh, T, Ito, E, Sunada, M, Ueda, T, Nakano, A, Wakatsuki, S.
Deposit date:2007-02-22
Release date:2008-02-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:GDP-bound and nucleotide-free intermediates of the guanine nucleotide exchange in the Rab5/Vps9 system
J.Biol.Chem., 285, 2010
2EFD
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BU of 2efd by Molmil
Ara7/AtVps9a
Descriptor: Similarity to vacuolar protein sorting-associated protein VPS9, Small GTP-binding protein-like
Authors:Uejima, T, Ihara, K, Wakatsuki, S.
Deposit date:2007-02-22
Release date:2008-02-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:GDP-bound and nucleotide-free intermediates of the guanine nucleotide exchange in the Rab5/Vps9 system
J.Biol.Chem., 285, 2010
2EFH
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BU of 2efh by Molmil
Ara7-GDP/AtVps9a(D185N)
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Similarity to vacuolar protein sorting-associated protein VPS9, Small GTP-binding protein-like
Authors:Ihara, K, Uejima, T, Wakatsuki, S.
Deposit date:2007-02-22
Release date:2008-02-26
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:GDP-bound and nucleotide-free intermediates of the guanine nucleotide exchange in the Rab5/Vps9 system
J.Biol.Chem., 285, 2010
2EFE
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BU of 2efe by Molmil
Ara7-GDPNH2/AtVps9a
Descriptor: AMINOPHOSPHONIC ACID-GUANYLATE ESTER, Similarity to vacuolar protein sorting-associated protein VPS9, Small GTP-binding protein-like
Authors:Ihara, K, Uejima, T, Wakatsuki, S.
Deposit date:2007-02-22
Release date:2008-02-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:GDP-bound and nucleotide-free intermediates of the guanine nucleotide exchange in the Rab5/Vps9 system
J.Biol.Chem., 285, 2010
2ZVN
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BU of 2zvn by Molmil
NEMO CoZi domain incomplex with diubiquitin in P212121 space group
Descriptor: NF-kappa-B essential modulator, UBC protein
Authors:Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I.
Deposit date:2008-11-12
Release date:2009-03-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation
Cell(Cambridge,Mass.), 136, 2009
2ZVO
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BU of 2zvo by Molmil
NEMO CoZi domain in complex with diubiquitin in C2 space group
Descriptor: NF-kappa-B essential modulator, UBC protein
Authors:Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I.
Deposit date:2008-11-12
Release date:2009-03-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation
Cell(Cambridge,Mass.), 136, 2009
3F89
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BU of 3f89 by Molmil
NEMO CoZi domain
Descriptor: NF-kappa-B essential modulator
Authors:Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I.
Deposit date:2008-11-11
Release date:2009-03-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation
Cell(Cambridge,Mass.), 136, 2009
4G01
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BU of 4g01 by Molmil
ARA7-GDP-Ca2+/VPS9a
Descriptor: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, Ras-related protein RABF2b, ...
Authors:Ihara, K.
Deposit date:2012-07-09
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Direct metal recognition by guanine nucleotide-exchange factor in the initial step of the exchange reaction
Acta Crystallogr.,Sect.D, 69, 2013
8H0V
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BU of 8h0v by Molmil
RNA polymerase II transcribing a chromatosome (type I)
Descriptor: DNA (261-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Hirano, R, Ehara, H, Tomoya, K, Takizawa, Y, Sekine, S, Kurumizaka, H.
Deposit date:2022-09-30
Release date:2022-12-07
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of RNA polymerase II transcription on the chromatosome containing linker histone H1.
Nat Commun, 13, 2022
8H0W
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BU of 8h0w by Molmil
RNA polymerase II transcribing a chromatosome (type II)
Descriptor: DNA (261-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Hirano, R, Ehara, H, Tomoya, K, Takizawa, Y, Sekine, S, Kurumizaka, H.
Deposit date:2022-09-30
Release date:2022-12-07
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis of RNA polymerase II transcription on the chromatosome containing linker histone H1.
Nat Commun, 13, 2022
5Y7Z
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BU of 5y7z by Molmil
Complex structure of cyclin G-associated kinase with gefitinib
Descriptor: Cyclin-G-associated kinase, Gefitinib, NANOBODY, ...
Authors:Ohbayashi, N, Murayama, K, Kato-Murayama, M, Shirouzu, M.
Deposit date:2017-08-18
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib.
ChemistryOpen, 7, 2018
5Y80
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BU of 5y80 by Molmil
Complex structure of cyclin G-associated kinase with gefitinib
Descriptor: Cyclin-G-associated kinase, Gefitinib, NANOBODY
Authors:Ohbayashi, N, Murayama, K, Kato-Murayama, M, Shirouzu, M.
Deposit date:2017-08-18
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib.
ChemistryOpen, 7, 2018
3BC1
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BU of 3bc1 by Molmil
Crystal Structure of the complex Rab27a-Slp2a
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rab-27A, ...
Authors:Chavas, L.M.G, Ihara, K, Kawasaki, M, Wakatsuki, S.
Deposit date:2007-11-12
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Elucidation of Rab27 recruitment by its effectors: structure of Rab27a bound to Exophilin4/Slp2-a
Structure, 16, 2008

217705

PDB entries from 2024-03-27

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