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4UOI
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BU of 4uoi by Molmil
Unexpected structure for the N-terminal domain of Hepatitis C virus envelope glycoprotein E1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GENOME POLYPROTEIN
Authors:El Omari, K, Iourin, O, Kadlec, J, Harlos, K, Grimes, J.M, Stuart, D.I.
Deposit date:2014-06-04
Release date:2014-08-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Unexpected Structure for the N-Terminal Domain of Hepatitis C Virus Envelope Glycoprotein E1
Acta Crystallogr.,Sect.D, 70, 2014
4ZEL
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BU of 4zel by Molmil
Human dopamine beta-hydroxylase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, ...
Authors:Vendelboe, T.V, Harris, P, Christensen, H.E.M, Harlos, K, Walter, T, Zhao, Y, Omari, K.
Deposit date:2015-04-20
Release date:2016-04-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of human dopamine beta-hydroxylase at 2.9 angstrom resolution.
Sci Adv, 2, 2016
4V5V
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BU of 4v5v by Molmil
Structure of respiratory syncytial virus nucleocapsid protein, P1 crystal form
Descriptor: RESPIRATORY SYNCYTIAL VIRUS NUCLEOCAPSID PROTEIN, RNA
Authors:El Omari, K, Dhaliwal, B, Ren, J, Abrescia, N.G.A, Lockyer, M, Powell, K.L, Hawkins, A.R, Stammers, D.K.
Deposit date:2011-05-04
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of Respiratory Syncytial Virus Nucleocapsid Protein from Two Crystal Forms: Details of Potential Packing Interactions in the Native Helical Form.
Acta Crystallogr.,Sect.F, 67, 2011
8PAB
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BU of 8pab by Molmil
Structures of the ectodomains of Atypical porcine pestivirus solved by long wavelength sulphur SAD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Genome polyprotein
Authors:Aitkenhead, H, Stuart, D.I, El Omari, K.
Deposit date:2023-06-07
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural comparison of typical and atypical E2 pestivirus glycoproteins.
Structure, 32, 2024
8PAE
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BU of 8pae by Molmil
Structure of the ectodomain of Atypical Porcine Pestivirus E2 at 1.2A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Genome polyprotein
Authors:Aitkenhead, H, Stuart, D.I, EL Omari, K.
Deposit date:2023-06-07
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural comparison of typical and atypical E2 pestivirus glycoproteins.
Structure, 32, 2024
8PAG
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BU of 8pag by Molmil
Crystal structure of the ectodomain of Norway rat pestivirus E2 glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Genome polyprotein, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Aitkenhead, H, Stuart, D.I, EL Omari, K.
Deposit date:2023-06-07
Release date:2024-03-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural comparison of typical and atypical E2 pestivirus glycoproteins.
Structure, 32, 2024
6YO1
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BU of 6yo1 by Molmil
Crystal structure of ribonuclease A solved by vanadium SAD phasing
Descriptor: Ribonuclease pancreatic, URIDINE-2',3'-VANADATE
Authors:El Omari, K, Mohamad, N, Bountra, K, Duman, R, Romano, M, Schlegel, K, Kwong, H, Mykhaylyk, V, Olesen, C.E, Moller, J.V, Bublitz, M, Beis, K, Wagner, A.
Deposit date:2020-04-14
Release date:2020-11-04
Last modified:2020-12-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Experimental phasing with vanadium and application to nucleotide-binding membrane proteins.
Iucrj, 7, 2020
6YSO
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BU of 6yso by Molmil
Crystal structure of the (SR) Ca2+-ATPase solved by vanadium SAD phasing
Descriptor: CHLORIDE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:El Omari, K, Mohamad, N, Bountra, K, Duman, R, Romano, M, Schlegel, K, Kwong, H, Mykhaylyk, V, Olesen, C.E, Moller, J.V, Bublitz, M, Beis, K, Wagner, A.
Deposit date:2020-04-22
Release date:2020-11-04
Last modified:2020-12-02
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Experimental phasing with vanadium and application to nucleotide-binding membrane proteins.
Iucrj, 7, 2020
5TCL
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BU of 5tcl by Molmil
Thaumatin from 4.96 A wavelength data collection
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin-1
Authors:Aurelius, O, Duman, R, El Omari, K, Mykhaylyk, V, Wagner, A.
Deposit date:2016-09-15
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Long-wavelength macromolecular crystallography - First successful native SAD experiment close to the sulfur edge.
Nucl Instrum Methods Phys Res B, 411, 2017
6JJH
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BU of 6jjh by Molmil
Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4
Descriptor: (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin, POTASSIUM ION, RNA (5'-R(*GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3')
Authors:Zhang, Y.S, EI Omari, K, Duman, R, Wagner, A, Parkinson, G.N, Wei, D.G.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
6JJF
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BU of 6jjf by Molmil
Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*TP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3'), POTASSIUM ION, ...
Authors:Zhang, Y.S, EI Omari, K, Duman, R, Wagner, A, Parkinson, G.N, Wei, D.G.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
6TQI
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BU of 6tqi by Molmil
I-MOTIF STRUCTURE FORMED FROM THE C STRAND OF A HUMAN TELOMERE FRAGMENT
Descriptor: DNA (5'-*TP*AP*AP*CP*CP*CP*TP*AP*A-3')
Authors:Parkinson, G.N, Wagner, A, Viladoms-Claverol, J, Duman, R, El-Omari, K.
Deposit date:2019-12-16
Release date:2020-06-10
Last modified:2020-11-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
7QU8
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BU of 7qu8 by Molmil
ADGRG3/GPR97 Extracellular Region
Descriptor: Adhesion G protein-coupled receptor G3
Authors:Zheng-Gerard, C, Chu, T.Y, El Omari, K, Lin, H.H, Seiradake, E.
Deposit date:2022-01-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:GPR97-mediated PAR2 transactivation via a mPR3-associated macromolecular complex induces inflammatory activation of human neutrophils
Nat Commun, 2022
5MUV
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BU of 5muv by Molmil
Atomic structure fitted into a localized reconstruction of bacteriophage phi6 packaging hexamer P4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Packaging enzyme P4
Authors:Sun, Z, El Omari, K, Sun, X, Ilca, S, Kotecha, A, Stuart, D.I, Poranen, M.M, Huiskonen, J.T.
Deposit date:2017-01-14
Release date:2017-03-22
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Double-stranded RNA virus outer shell assembly by bona fide domain-swapping.
Nat Commun, 8, 2017
5MUW
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BU of 5muw by Molmil
Atomic structure of P4 packaging enzyme fitted into a localized reconstruction of bacteriophage phi6 vertex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Packaging enzyme P4
Authors:Sun, Z, El Omari, K, Sun, X, Ilca, S, Kotecha, A, Stuart, D.I, Poranen, M.M, Huiskonen, J.T.
Deposit date:2017-01-14
Release date:2017-03-22
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Double-stranded RNA virus outer shell assembly by bona fide domain-swapping.
Nat Commun, 8, 2017
6RVD
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BU of 6rvd by Molmil
Revised cryo-EM structure of the human 2:1 Ptch1-Shh complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:El Omari, K, Rudolf, A.F, Kowatsch, C, Malinauskas, T, Kinnebrew, M, Ansell, T.B, Bishop, B, Pardon, E, Schwab, R.A, Qian, M, Duman, R, Covey, D.F, Steyaert, J, Wagner, A, Sansom, M.S.P, Rohatgi, R, Siebold, C.
Deposit date:2019-05-31
Release date:2019-10-02
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The morphogen Sonic hedgehog inhibits its receptor Patched by a pincer grasp mechanism.
Nat.Chem.Biol., 15, 2019
2C5U
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BU of 2c5u by Molmil
T4 RNA Ligase (Rnl1) Crystal Structure
Descriptor: CALCIUM ION, CHLORIDE ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ...
Authors:El Omari, K, Ren, J, Bird, L.E, Bona, M.K, Klarmann, G, LeGrice, S.F.J, Stammers, D.K.
Deposit date:2005-11-01
Release date:2005-11-04
Last modified:2012-09-12
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Molecular Architecture and Ligand Recognition Determinants for T4 RNA Ligase
J.Biol.Chem., 281, 2006
2BKA
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BU of 2bka by Molmil
CC3(TIP30)Crystal Structure
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, GLYCEROL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:El Omari, K, Bird, L.E, Nichols, C.E, Ren, J, Stammers, D.K.
Deposit date:2005-02-14
Release date:2005-02-21
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Cc3 (Tip30): Implications for its Role as a Tumor Suppressor
J.Biol.Chem., 280, 2005
2J87
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BU of 2j87 by Molmil
Structure of vaccinia virus thymidine kinase in complex with dTTP: insights for drug design
Descriptor: MAGNESIUM ION, THYMIDINE KINASE, THYMIDINE-5'-TRIPHOSPHATE, ...
Authors:El Omari, K, Solaroli, N, Karlsson, A, Balzarini, J, Stammers, D.K.
Deposit date:2006-10-23
Release date:2006-11-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of Vaccinia Virus Thymidine Kinase in Complex with Dttp: Insights for Drug Design.
Bmc Struct.Biol., 6, 2006
2J0F
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BU of 2j0f by Molmil
Structural basis for non-competitive product inhibition in human thymidine phosphorylase: implication for drug design
Descriptor: THYMIDINE PHOSPHORYLASE, THYMINE
Authors:El Omari, K, Bronckaers, A, Liekens, S, Perez-Perez, M.J, Balzarini, J, Stammers, D.K.
Deposit date:2006-08-02
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural Basis for Non-Competitive Product Inhibition in Human Thymidine Phosphorylase: Implications for Drug Design.
Biochem.J., 399, 2006
2J41
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BU of 2j41 by Molmil
Crystal structure of Staphylococcus aureus guanylate monophosphate kinase
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, GUANYLATE KINASE, POTASSIUM ION, ...
Authors:El Omari, K, Dhaliwal, B, Lockyer, M, Charles, I, Hawkins, A.R, Stammers, D.K.
Deposit date:2006-08-24
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Staphylococcus Aureus Guanylate Monophosphate Kinase
Acta Crystallogr.,Sect.F, 62, 2006
6J7V
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BU of 6j7v by Molmil
Structure of HRPV6 VP5 fitted in the cryoEM density of the spike
Descriptor: VP5
Authors:El Omari, K, Li, S, Huiskonen, J.T, Stuart, D.I.
Deposit date:2019-01-18
Release date:2019-03-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (16 Å)
Cite:The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.
Nat Commun, 10, 2019
5MDU
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BU of 5mdu by Molmil
Structure of the RNA recognition motif (RRM) of Seb1 from S. pombe.
Descriptor: CHLORIDE ION, GLYCEROL, Rpb7-binding protein seb1, ...
Authors:Wittmann, S, Renner, M, El Omari, K, Adams, O, Vasiljeva, L, Grimes, J.
Deposit date:2016-11-13
Release date:2017-04-12
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA.
Nat Commun, 8, 2017
5MUU
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BU of 5muu by Molmil
dsRNA bacteriophage phi6 nucleocapsid
Descriptor: Major inner protein P1, Major outer capsid protein, Packaging enzyme P4
Authors:Sun, Z, El Omari, K, Sun, X, Ilca, S.L, Kotecha, A, Stuart, D.I, Poranen, M.M, Huiskonen, J.T.
Deposit date:2017-01-14
Release date:2017-03-22
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Double-stranded RNA virus outer shell assembly by bona fide domain-swapping.
Nat Commun, 8, 2017
7ACX
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BU of 7acx by Molmil
H/L (SLPH/SLPL) complex from C. difficile (R7404 strain)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S-layer protein, SULFATE ION
Authors:Lanzoni-Mangutchi, P, Barwinska-Sendra, A, Basle, A, El Omari, K, Wagner, A, Salgado, P.S.
Deposit date:2020-09-11
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022

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PDB entries from 2024-03-27

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