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1RIL
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BU of 1ril by Molmil
CRYSTAL STRUCTURE OF RIBONUCLEASE H FROM THERMUS THERMOPHILUS HB8 REFINED AT 2.8 ANGSTROMS RESOLUTION
Descriptor: RIBONUCLEASE H
Authors:Ishikawa, K, Okumura, M, Katayanagi, K, Kimura, S, Kanaya, S, Nakamura, H, Morikawa, K.
Deposit date:1993-01-14
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of ribonuclease H from Thermus thermophilus HB8 refined at 2.8 A resolution.
J.Mol.Biol., 230, 1993
5AZZ
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BU of 5azz by Molmil
Crystal structure of seleno-insulin
Descriptor: Insulin A chain, Insulin B chain
Authors:Watanabe, S, Okumura, M, Arai, K, Takei, T, Asahina, Y, Hojo, H, Iwaoka, M, Inaba, K.
Deposit date:2015-10-23
Release date:2017-05-03
Last modified:2017-06-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Preparation of Selenoinsulin as a Long-Lasting Insulin Analogue.
Angew. Chem. Int. Ed. Engl., 56, 2017
6XCJ
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BU of 6xcj by Molmil
Crystal Structure of DH650 Fab from a Rhesus Macaque in Complex with HIV-1 gp120 Core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DH650 Fab Heavy Chain, DH650 Fab Light Chain, ...
Authors:Raymond, D.D, Chug, H, Harrison, S.C.
Deposit date:2020-06-08
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth.
Science, 371, 2021
6XRT
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BU of 6xrt by Molmil
Cryo-EM structure of SHIV-elicited RHA1.V2.01 in complex with HIV-1 Env BG505 DS-SOSIP.664
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2020-07-13
Release date:2020-10-07
Last modified:2021-01-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth.
Science, 371, 2021
1RDB
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BU of 1rdb by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
Descriptor: RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of ribonuclease HI active site mutants from Escherichia coli.
J.Biol.Chem., 268, 1993
1RDC
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BU of 1rdc by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
Descriptor: RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of ribonuclease HI active site mutants from Escherichia coli.
J.Biol.Chem., 268, 1993
1RDA
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BU of 1rda by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
Descriptor: RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of ribonuclease HI active site mutants from Escherichia coli.
J.Biol.Chem., 268, 1993
1RDD
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BU of 1rdd by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNASE HI IN COMPLEX WITH MG2+ AT 2.8 ANGSTROMS RESOLUTION: PROOF FOR A SINGLE MG2+ SITE
Descriptor: MAGNESIUM ION, RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Escherichia coli RNase HI in complex with Mg2+ at 2.8 A resolution: proof for a single Mg(2+)-binding site.
Proteins, 17, 1993
2ZND
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BU of 2znd by Molmil
Crystal structure of Ca2+-free form of des3-20ALG-2
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, PHOSPHATE ION, Programmed cell death protein 6, ...
Authors:Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
5AYK
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BU of 5ayk by Molmil
Crystal structure of ERdj5 form I
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, CHLORIDE ION, DnaJ homolog subfamily C member 10
Authors:Watanabe, S, Maegawa, K, Inaba, K.
Deposit date:2015-08-22
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation
To Be Published
5AYL
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BU of 5ayl by Molmil
Crystal structure of ERdj5 form II
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, DnaJ homolog subfamily C member 10
Authors:Watanabe, S, Maegawa, K, Inaba, K.
Deposit date:2015-08-22
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation
To Be Published
2ZN9
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BU of 2zn9 by Molmil
Crystal structure of Ca2+-bound form of des3-20ALG-2
Descriptor: CALCIUM ION, DODECAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, ...
Authors:Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZN8
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BU of 2zn8 by Molmil
Crystal structure of Zn2+-bound form of ALG-2
Descriptor: Programmed cell death protein 6, SODIUM ION, ZINC ION
Authors:Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZNE
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BU of 2zne by Molmil
Crystal structure of Zn2+-bound form of des3-23ALG-2 complexed with Alix ABS peptide
Descriptor: 16-meric peptide from Programmed cell death 6-interacting protein, Programmed cell death protein 6, SODIUM ION, ...
Authors:Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
3VWU
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BU of 3vwu by Molmil
Crystal structure of peroxiredoxin 4 from M. musculus
Descriptor: Peroxiredoxin-4
Authors:Inaba, K, Suzuki, M.
Deposit date:2012-09-03
Release date:2013-09-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Synergistic cooperation of PDI family members in peroxiredoxin 4-driven oxidative protein folding
Sci Rep, 3, 2013
3AGG
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BU of 3agg by Molmil
X-ray analysis of lysozyme in the absence of Arg
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Ito, L, Shiraki, K, Hasegawa, K, Baba, S, Kumasaka, T.
Deposit date:2010-03-31
Release date:2011-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine
Protein Eng.Des.Sel., 24, 2011
3AGH
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BU of 3agh by Molmil
X-ray analysis of lysozyme in the presence of 200 mM Arg
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Ito, L, Shiraki, K, Hasegawa, K, Baba, S, Kumasaka, T.
Deposit date:2010-03-31
Release date:2011-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine
Protein Eng.Des.Sel., 24, 2011
3AGI
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BU of 3agi by Molmil
High resolution X-ray analysis of Arg-lysozyme complex in the presence of 500 mM Arg
Descriptor: ACETATE ION, ARGININE, CHLORIDE ION, ...
Authors:Ito, L, Shiraki, K, Hasegawa, K, Baba, S, Kumasaka, T.
Deposit date:2010-03-31
Release date:2011-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine
Protein Eng.Des.Sel., 24, 2011
3VWV
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BU of 3vwv by Molmil
crystal structure of N-terminally truncated peroxiredoxin 4 from M. musculus
Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, Peroxiredoxin-4
Authors:Inaba, K, Suzuki, M.
Deposit date:2012-09-03
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synergistic cooperation of PDI family members in peroxiredoxin 4-driven oxidative protein folding
Sci Rep, 3, 2013
3VWW
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BU of 3vww by Molmil
Crystal structure of a0-domain of P5 from H. sapiens
Descriptor: PHOSPHATE ION, Protein disulfide-isomerase A6
Authors:Inaba, K, Suzuki, M.
Deposit date:2012-09-03
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Synergistic cooperation of PDI family members in peroxiredoxin 4-driven oxidative protein folding
Sci Rep, 3, 2013
3W8J
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BU of 3w8j by Molmil
Crystal structure of P5 a0 in a complex with Prx4 c-term
Descriptor: C-terminal peptide from Peroxiredoxin-4, GLYCEROL, POTASSIUM ION, ...
Authors:Inaba, K, Suzuki, M, Kojima, R.
Deposit date:2013-03-13
Release date:2013-09-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Synergistic cooperation of PDI family members in peroxiredoxin 4-driven oxidative protein folding
Sci Rep, 3, 2013
3WGE
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BU of 3wge by Molmil
Crystal structure of ERp46 Trx2
Descriptor: GLYCEROL, Thioredoxin domain-containing protein 5
Authors:Inaba, K, Suzuki, M, Kojima, R.
Deposit date:2013-08-04
Release date:2014-06-25
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Radically different thioredoxin domain arrangement of ERp46, an efficient disulfide bond introducer of the mammalian PDI family
Structure, 22, 2014
3WGD
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BU of 3wgd by Molmil
Crystal structure of ERp46 Trx1
Descriptor: GLYCEROL, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Inaba, K, Suzuki, M, Kojima, R.
Deposit date:2013-08-04
Release date:2014-06-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Radically different thioredoxin domain arrangement of ERp46, an efficient disulfide bond introducer of the mammalian PDI family
Structure, 22, 2014
3WGX
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BU of 3wgx by Molmil
Crystal structure of ERp46 Trx2 in a complex with Prx4 C-term
Descriptor: GLYCEROL, Peroxiredoxin-4, Thioredoxin domain-containing protein 5
Authors:Inaba, K, Suzuki, M, Kojima, R.
Deposit date:2013-08-13
Release date:2014-06-25
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Radically different thioredoxin domain arrangement of ERp46, an efficient disulfide bond introducer of the mammalian PDI family
Structure, 22, 2014
1KVB
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BU of 1kvb by Molmil
E. COLI RIBONUCLEASE HI D134H MUTANT
Descriptor: RIBONUCLEASE H
Authors:Kashiwagi, T, Jeanteur, D, Haruki, M, Katayanagi, K, Kanaya, S, Morikawa, K.
Deposit date:1996-10-04
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Proposal for new catalytic roles for two invariant residues in Escherichia coli ribonuclease HI.
Protein Eng., 9, 1996

 

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