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6H8O
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BU of 6h8o by Molmil
Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
Descriptor: Replication-associated protein, SULFATE ION
Authors:Moncalian, G, Gonzalez-Montes, L.
Deposit date:2018-08-02
Release date:2018-08-22
Last modified:2018-10-03
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
To Be Published
1US8
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BU of 1us8 by Molmil
The Rad50 signature motif: essential to ATP binding and biological function
Descriptor: DNA DOUBLE-STRAND BREAK REPAIR RAD50 ATPASE
Authors:Moncalian, G, Lengsfeld, B, Bhaskara, V, Hopfner, K.P, Karcher, A, Alden, E, Tainer, J.A, Paull, T.T.
Deposit date:2003-11-20
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Rad50 Signature Motif: Essential to ATP Binding and Biological Function
J.Mol.Biol., 335, 2004
2J6O
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BU of 2j6o by Molmil
ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N-TERMINAL SH3 DOMAIN. CMS:CD2 HETEROTRIMER
Descriptor: CD2-ASSOCIATED PROTEIN, T-CELL SURFACE ANTIGEN CD2
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-10-02
Release date:2006-10-11
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Atypical Polyproline Recognition by the Cms N-Terminal SH3 Domain.
J.Biol.Chem., 281, 2006
2J6K
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BU of 2j6k by Molmil
N-TERMINAL SH3 DOMAIN OF CMS (CD2AP HUMAN HOMOLOG)
Descriptor: CD2-ASSOCIATED PROTEIN, SODIUM ION
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-09-29
Release date:2006-10-11
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Atypical Polyproline Recognition by the Cms N- Terminal SH3 Domain.
J.Biol.Chem., 281, 2006
2J7I
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BU of 2j7i by Molmil
ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N-TERMINAL SH3 DOMAIN. CMS:CD2 HETERODIMER
Descriptor: CD2-ASSOCIATED PROTEIN, T-CELL SURFACE ANTIGEN CD2
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-10-09
Release date:2006-11-06
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Atypical Polyproline Recognition by the Cms N-Terminal Src Homology 3 Domain.
J.Biol.Chem., 281, 2006
2J6F
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BU of 2j6f by Molmil
N-TERMINAL SH3 DOMAIN OF CMS (CD2AP HUMAN HOMOLOG) BOUND TO CBL-B PEPTIDE
Descriptor: CD2-ASSOCIATED PROTEIN, E3 UBIQUITIN-PROTEIN LIGASE CBL-B
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-09-28
Release date:2006-10-11
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Atypical Polyproline Recognition by the Cms N- Terminal SH3 Domain.
J.Biol.Chem., 281, 2006
4PCB
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BU of 4pcb by Molmil
Conjugative Relaxase TrwC in complex with mutant OriT Dna
Descriptor: DNA 5'-D(P*GP*CP*AP*CP*CP*GP*AP*AP*GP*GP*TP*GP*CP*GP*TP*AP*TP*TP*CP*TP*TP*GP - 3'), PHOSPHATE ION, TrwC
Authors:Moncalian, G, Carballeira, J.D, de la Cruz, F, Gonzalez-Perez, B.
Deposit date:2014-04-14
Release date:2014-09-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A high security double lock and key mechanism in HUH relaxases controls oriT-processing for plasmid conjugation.
Nucleic Acids Res., 42, 2014
7PC1
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BU of 7pc1 by Molmil
DNA binding domain of partition protein StbA of plasmid R388
Descriptor: StbA
Authors:Guynet, C, Moncalian, G.
Deposit date:2021-08-03
Release date:2022-08-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of the DNA Binding Domain of StbA, A Key Protein of A New Type of DNA Segregation System.
J.Mol.Biol., 434, 2022
3DSC
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BU of 3dsc by Molmil
Crystal structure of P. furiosus Mre11 DNA synaptic complex
Descriptor: DNA (5'-D(P*DCP*DAP*DCP*DAP*DAP*DGP*DCP*DTP*DTP*DTP*DTP*DGP*DCP*DTP*DTP*DGP*DTP*DGP*DAP*DC)-3'), DNA double-strand break repair protein mre11
Authors:Williams, R.S, Moncalian, G, Shin, D.S, Tainer, J.A.
Deposit date:2008-07-11
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mre11 dimers coordinate DNA end bridging and nuclease processing in double-strand-break repair.
Cell(Cambridge,Mass.), 135, 2008
6I89
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BU of 6i89 by Molmil
Crystal structure of Antirestriction ArdC protein from R388 plasmid. Metal-free structure.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ArdC protein
Authors:Gonzalez-Montes, L, Moncalian, G.
Deposit date:2018-11-19
Release date:2020-03-18
Last modified:2020-05-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range.
Plos Genet., 16, 2020
7BCB
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BU of 7bcb by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to IR3 DNA
Descriptor: DNA (5'-D(*TP*AP*AP*TP*GP*TP*CP*AP*AP*AP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*TP*TP*TP*GP*AP*CP*AP*TP*TP*A)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-19
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
7BCA
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BU of 7bca by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to a direct-repeat DNA element
Descriptor: DNA (5'-D(*GP*TP*AP*TP*TP*GP*AP*CP*AP*CP*CP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*GP*GP*TP*GP*TP*CP*AP*AP*TP*AP*C)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2022-12-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
1GL6
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BU of 1gl6 by Molmil
Plasmid coupling protein TrwB in complex with the non-hydrolysable GTP analogue GDPNP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ATPASE, CHLORIDE ION, ...
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-28
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1GL7
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BU of 1gl7 by Molmil
Plasmid coupling protein TrwB in complex with the non-hydrolisable ATP-analogue ADPNP.
Descriptor: CHLORIDE ION, CONJUGAL TRANSFER PROTEIN TRWB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-28
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1GKI
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BU of 1gki by Molmil
Plasmid coupling protein TrwB in complex with ADP and Mg2+.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, CONJUGAL TRANSFER PROTEIN TRWB, ...
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-14
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
3QKU
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BU of 3qku by Molmil
Mre11 Rad50 binding domain in complex with Rad50 and AMP-PNP
Descriptor: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase, MAGNESIUM ION, ...
Authors:Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A.
Deposit date:2011-02-01
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.
Nat.Struct.Mol.Biol., 18, 2011
3QKT
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BU of 3qkt by Molmil
Rad50 ABC-ATPase with adjacent coiled-coil region in complex with AMP-PNP
Descriptor: DNA double-strand break repair rad50 ATPase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A.
Deposit date:2011-02-01
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.
Nat.Struct.Mol.Biol., 18, 2011
3QKS
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BU of 3qks by Molmil
Mre11 Rad50 binding domain bound to Rad50
Descriptor: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase
Authors:Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A.
Deposit date:2011-02-01
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.
Nat.Struct.Mol.Biol., 18, 2011
3QKR
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BU of 3qkr by Molmil
Mre11 Rad50 binding domain bound to Rad50
Descriptor: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase, PHOSPHATE ION
Authors:Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A.
Deposit date:2011-02-01
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.
Nat.Struct.Mol.Biol., 18, 2011
6RIW
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BU of 6riw by Molmil
PfaC Keto synthase-Chain length factor
Descriptor: MAGNESIUM ION, ORF10
Authors:Santin, O, Moncalian, G.
Deposit date:2019-04-25
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Mechanism of the Ketosynthase-Chain Length Factor Didomain from a Prototypical Polyunsaturated Fatty Acid Synthase.
Biochemistry, 59, 2020
6SNA
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BU of 6sna by Molmil
Crystal structure of Antirestriction ArdC protein from R388 plasmid. Mn(II)-bound structure.
Descriptor: ArdC protein, MANGANESE (II) ION
Authors:Gonzalez-Montes, L, Moncalian, G.
Deposit date:2019-08-23
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range.
Plos Genet., 16, 2020
7BBQ
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BU of 7bbq by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid. Apo form.
Descriptor: KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2022-12-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
1OMH
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BU of 1omh by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: DNA OLIGONUCLEOTIDE, SULFATE ION, trwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-02-25
Release date:2003-11-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
1OSB
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BU of 1osb by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: Dna oligonucleotide, SULFATE ION, TrwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-03-19
Release date:2003-11-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
2AK5
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BU of 2ak5 by Molmil
beta PIX-SH3 complexed with a Cbl-b peptide
Descriptor: 8-residue peptide from a signal transduction protein CBL-B, Rho guanine nucleotide exchange factor 7
Authors:Jozic, D, Cardenes, N, Deribe, Y.L, Moncalian, G, Hoeller, D, Groemping, Y, Dikic, I, Rittinger, K, Bravo, J.
Deposit date:2005-08-03
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Cbl promotes clustering of endocytic adaptor proteins.
Nat.Struct.Mol.Biol., 12, 2005

 

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