Author results

1NST
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THE SULFOTRANSFERASE DOMAIN OF HUMAN HAPARIN SULFATE N-DEACETYLASE/N-SULFOTRANSFERASE
分子名称:HEPARAN SULFATE N-DEACETYLASE/N-SULFOTRANSFERASE, ADENOSINE-3'-5'-DIPHOSPHATE
著者Kakuta, Y., Pedersen, L.C., Negishi, M.
登録日1998-09-07
公開日1999-09-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the sulfotransferase domain of human heparan sulfate N-deacetylase/ N-sulfotransferase 1.
J.Biol.Chem., 274, 1999
1I7H
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CRYSTAL STURCUTURE OF FDX
分子名称:FERREDOXIN, FE2/S2 (INORGANIC) CLUSTER
著者Kakuta, Y., Horio, T., Takahashi, Y., Fukuyama, K.
登録日2001-03-09
公開日2002-03-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Escherichia coli Fdx, an adrenodoxin-type ferredoxin involved in the assembly of iron-sulfur clusters.
Biochemistry, 40, 2001
2Z4T
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CRYSTAL STRUCTURE OF VIBRIONACEAE PHOTOBACTERIUM SP. JT-ISH-224 2,6-SIALYLTRANSFERASE IN A TERNARY COMPLEX WITH DONOR PRODUCT CMP AND ACCEPTER SUBSTRATE LACTOSE
分子名称:Beta-galactoside alpha-2,6-sialyltransferase, ALPHA-LACTOSE, PHOSPHATE ION, ...
著者Kakuta, Y., Okino, N., Kajiwara, H., Ichikawa, M., Takakura, Y., Ito, M., Yamamoto, T.
登録日2007-06-25
公開日2008-04-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Vibrionaceae Photobacterium sp. JT-ISH-224 alpha2,6-sialyltransferase in a ternary complex with donor product CMP and acceptor substrate lactose: catalytic mechanism and substrate recognition
Glycobiology, 18, 2008
3AY8
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GLUTATHIONE S-TRANSFERASE UNCLASSIFIED 2 FROM BOMBYX MORI
分子名称:Glutathione S-transferase, GLYCEROL
著者Kakuta, Y., Usuda, K., Nakashima, T., Kimura, M., Aso, Y., Yamamoto, K.
登録日2011-05-02
公開日2011-09-07
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic survey of active sites of an unclassified glutathione transferase from Bombyx mori
Biochim.Biophys.Acta, 1810, 2011
1AQU
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ESTROGEN SULFOTRANSFERASE WITH BOUND INACTIVE COFACTOR PAP AND 17-BETA ESTRADIOL
分子名称:ESTROGEN SULFOTRANSFERASE, ADENOSINE-3'-5'-DIPHOSPHATE, ESTRADIOL
著者Kakuta, Y., Negishi, M., Pedersen, L.C.
登録日1997-08-01
公開日1998-10-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of estrogen sulphotransferase.
Nat.Struct.Biol., 4, 1997
1AQY
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ESTROGEN SULFOTRANSFERASE WITH PAP
分子名称:ESTROGEN SULFOTRANSFERASE, ADENOSINE-3'-5'-DIPHOSPHATE
著者Kakuta, Y., Pedersen, L.G., Carter, C.W., Negishi, M., Pedersen, L.C.
登録日1997-08-04
公開日1998-10-28
最終更新日2017-08-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of estrogen sulphotransferase.
Nat.Struct.Biol., 4, 1997
1BO6
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ESTROGEN SULFOTRANSFERASE WITH INACTIVE COFACTOR PAP AND VANADATE
分子名称:ESTROGEN SULFOTRANSFERASE, VANADATE ION, ADENOSINE-3'-5'-DIPHOSPHATE
著者Kakuta, Y., Negishi, M., Pedersen, L.C.
登録日1998-08-10
公開日1999-08-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The sulfuryl transfer mechanism. Crystal structure of a vanadate complex of estrogen sulfotransferase and mutational analysis.
J.Biol.Chem., 273, 1998
1VB5
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CRYSTAL STRUCTURE ANALYSIS OF THE PYROCOCCUS HORIKOSHII OT3 TRANSLATION INITIATION FACTOR EIF-2B
分子名称:translation initiation factor eIF-2B
著者Kakuta, Y., Tahara, M., Maetani, S., Kimura, M.
登録日2004-02-22
公開日2004-12-07
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the regulatory subunit of archaeal initiation factor 2B (aIF2B) from hyperthermophilic archaeon Pyrococcus horikoshii OT3: a proposed structure of the regulatory subcomplex of eukaryotic IF2B
Biochem.Biophys.Res.Commun., 319, 2004
1X0T
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CRYSTAL STRUCTURE OF RIBONUCLEASE P PROTEIN PH1601P FROM PYROCOCCUS HORIKOSHII OT3
分子名称:Ribonuclease P protein component 4, ZINC ION
著者Kakuta, Y., Ishimatsu, I., Numata, T., Kimura, K., Yao, M., Tanaka, I., Kimura, M.
登録日2005-03-29
公開日2005-11-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of a Ribonuclease P Protein Ph1601p from Pyrococcus horikoshii OT3: An Archaeal Homologue of Human Nuclear Ribonuclease P Protein Rpp21(,)
Biochemistry, 44, 2005
1X0U
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CRYSTAL STRUCTURE OF THE CARBOXYL TRANSFERASE SUBUNIT OF PUTATIVE PCC OF SULFOLOBUS TOKODAII
分子名称:hypothetical methylmalonyl-CoA decarboxylase alpha subunit
著者Kakuta, Y., Sueda, S., Kondo, H.
登録日2005-03-29
公開日2006-07-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the carboxyl transferase subunit of putative PCC of Sulfolobus tokodaii
To be Published
2E9L
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CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NEUTRAL BETA-GLYCOSYLCERAMIDASE (KLOTHO-RELATED PROTE:KLRP) COMPLEX WITH GLUCOSE AND FATTY ACIDS
分子名称:Cytosolic beta-glucosidase, BETA-D-GLUCOSE, PALMITIC ACID, ...
著者Kakuta, Y., Hayashi, Y., Okino, N., Ito, M.
登録日2007-01-25
公開日2007-09-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Klotho-related protein is a novel cytosolic neutral beta-glycosylceramidase.
J.Biol.Chem., 282, 2007
2E9M
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CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NEUTRAL BETA-GLYCOSYLCERAMIDASE (KLOTHO-RELATED PROTE:KLRP) COMPLEX WITH GALACTOSE AND FATTY ACIDS
分子名称:Cytosolic beta-glucosidase, BETA-D-GALACTOSE, PALMITIC ACID, ...
著者Kakuta, Y., Hayashi, Y., Okino, N., Ito, M.
登録日2007-01-25
公開日2007-09-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Klotho-related protein is a novel cytosolic neutral beta-glycosylceramidase.
J.Biol.Chem., 282, 2007
2ZSC
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TAMAVIDIN2, NOVEL AVIDIN-LIKE BIOTIN-BINDING PROTEINS FROM AN EDIBLE MUSHROOM
分子名称:Tamavidin2, GLYCEROL, BIOTIN, ...
著者Kakuta, Y., Okino, N., Ito, M., Yamamoto, T., Takakura, Y.
登録日2008-09-05
公開日2009-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Tamavidins--novel avidin-like biotin-binding proteins from the Tamogitake mushroom
Febs J., 276, 2009
1UAI
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CRYSTAL STRUCTURE OF THE ALGINATE LYASE FROM CORYNEBACTERIUM SP.
分子名称:polyguluronate lyase
著者Kakuta, Y.
登録日2003-03-11
公開日2004-07-27
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of the alginate (poly alpha-l-guluronate) lyase from Corynebacterium sp. at 1.2 A resolution
J.Mol.Biol., 345, 2005
2ZWS
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CRYSTAL STRUCTURE ANALYSIS OF NEUTRAL CERAMIDASE FROM PSEUDOMONAS AERUGINOSA
分子名称:Neutral ceramidase, ZINC ION, MAGNESIUM ION, ...
著者Kakuta, Y., Okino, N., Inoue, T., Okano, H., Ito, M.
登録日2008-12-17
公開日2009-03-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mechanistic insights into the hydrolysis and synthesis of ceramide by neutral ceramidase.
J.Biol.Chem., 284, 2009
3VK9
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CRYSTAL STRUCTURE OF DELTA-CLASS GLUTATHIONE TRANSFERASE FROM SILKMOTH
分子名称:Glutathione S-transferase delta, GLYCEROL
著者Kakuta, Y., Usuda, K., Higashiura, A., Suzuki, M., Nakagawa, A., Kimura, M., Yamamoto, K.
登録日2011-11-10
公開日2012-10-03
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase
Biochim.Biophys.Acta, 1820, 2012
3AMK
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STRUCTURE OF THE STARCH BRANCHING ENZYME I (BEI) FROM ORYZA SATIVA L
分子名称:Os06g0726400 protein, PHOSPHATE ION, GLYCEROL
著者Kakuta, Y., Chaen, K., Noguchi, J., Vu, N., Kimura, M.
登録日2010-08-20
公開日2011-09-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding.
Glycobiology, 21, 2011
3AML
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STRUCTURE OF THE STARCH BRANCHING ENZYME I (BEI) FROM ORYZA SATIVA L
分子名称:Os06g0726400 protein, BETA-MERCAPTOETHANOL, GLYCEROL, ...
著者Kakuta, Y., Chaen, K., Noguchi, J., Vu, N., Kimura, M.
登録日2010-08-20
公開日2011-09-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding.
Glycobiology, 21, 2011
1IRM
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CRYSTAL STRUCTURE OF APO HEME OXYGENASE-1
分子名称:apo heme oxygenase-1
著者Sugishima, M., Sakamoto, H., Kakuta, Y., Omata, Y., Hayashi, S., Noguchi, M., Fukuyama, K.
登録日2001-10-09
公開日2002-07-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of rat apo-heme oxygenase-1 (HO-1): mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms
Biochemistry, 41, 2002
3VSM
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THE CRYSTAL STRUCTURE OF NOVEL CHONDROITION LYASE ODV-E66, BACULOVIRUS ENVELOPE PROTEIN
分子名称:Occlusion-derived virus envelope protein E66, GLYCEROL
著者Kawaguchi, Y., Sugiura, N., Kimata, K., Kimura, M., Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
3VSN
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THE CRYSTAL STRUCTURE OF NOVEL CHONDROITION LYASE ODV-E66, BACULOVIRUS ENVELOPE PROTEIN
分子名称:Occlusion-derived virus envelope protein E66, IODIDE ION, GLYCEROL
著者Kawaguchi, Y., Sugiura, N., Kimata, K., Kimura, M., Kakuta, Y.
登録日2012-04-27
公開日2013-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
1IR6
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CRYSTAL STRUCTURE OF EXONUCLEASE RECJ BOUND TO MANGANESE
分子名称:exonuclease RecJ, MANGANESE (II) ION
著者Yamagata, A., Kakuta, Y., Masui, R., Fukuyama, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-09-11
公開日2002-05-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity.
Proc.Natl.Acad.Sci.USA, 99, 2002
3AP1
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CRYSTAL STRUCTURE OF HUMAN TYROSYLPROTEIN SULFOTRANSFERASE-2 COMPLEXED WITH PAP AND C4 PEPTIDE
分子名称:Protein-tyrosine sulfotransferase 2, C4 peptide, ADENOSINE-3'-5'-DIPHOSPHATE, ...
著者Teramoto, T., Fujikawa, Y., Kawaguchi, Y., Kurogi, K., Soejima, M., Adachi, R., Nakanishi, Y., Mishiro-Sato, E., Liu, M.-C., Sakakibara, Y., Suiko, M., Kimura, M., Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction.
Nat Commun, 4, 2013
3AP2
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CRYSTAL STRUCTURE OF HUMAN TYROSYLPROTEIN SULFOTRANSFERASE-2 COMPLEXED WITH PAP,C4 PEPTIDE, AND PHOSPHATE ION
分子名称:Protein-tyrosine sulfotransferase 2, C4 peptide, ADENOSINE-3'-5'-DIPHOSPHATE, ...
著者Teramoto, T., Fujikawa, Y., Kawaguchi, Y., Kurogi, K., Soejima, M., Adachi, R., Nakanishi, Y., Mishiro-Sato, E., Liu, M.-C., Sakakibara, Y., Suiko, M., Kimura, M., Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2: Insights into substrate-binding and catalysis of post-translational protein tyrosine sulfation
To be Published
3AP3
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CRYSTAL STRUCTURE OF HUMAN TYROSYLPROTEIN SULFOTRANSFERASE-2 COMPLEXED WITH PAP
分子名称:Protein-tyrosine sulfotransferase 2, ADENOSINE-3'-5'-DIPHOSPHATE
著者Teramoto, T., Fujikawa, Y., Kawaguchi, Y., Kurogi, K., Soejima, M., Adachi, R., Nakanishi, Y., Mishiro-Sato, E., Liu, M.-C., Sakakibara, Y., Suiko, M., Kimura, M., Kakuta, Y.
登録日2010-10-09
公開日2011-10-26
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction.
Nat Commun, 4, 2013