Author results

1GEE
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CRYSTAL STRUCTURE OF GLUCOSE DEHYDROGENASE MUTANT Q252L COMPLEXED WITH NAD+
分子名称:GLUCOSE 1-DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamamoto, K., Kurisu, G., Kusunoki, M., Tabata, S., Urabe, I., Osaki, S.
登録日2000-11-07
公開日2003-08-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural analysis of stability-increasing mutants of glucose dehydrogenase
To be Published
1G6K
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CRYSTAL STRUCTURE OF GLUCOSE DEHYDROGENASE MUTANT E96A COMPLEXED WITH NAD+
分子名称:GLUCOSE 1-DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamamoto, K., Kurisu, G., Kusunoki, M., Tabata, S., Urabe, I., Osaki, S.
登録日2000-11-06
公開日2003-08-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of stability-increasing mutants of glucose dehydrogenase
To be Published
1GCO
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CRYSTAL STRUCTURE OF GLUCOSE DEHYDROGENASE COMPLEXED WITH NAD+
分子名称:GLUCOSE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamamoto, K., Kurisu, G., Kusunoki, M., Tabata, S., Urabe, I., Osaki, S.
登録日2000-08-07
公開日2001-02-28
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of glucose dehydrogenase from Bacillus megaterium IWG3 at 1.7 A resolution.
J.Biochem.(Tokyo), 129, 2001
5X7Y
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CRYSTAL STRUCTURE OF THE DOG LIPOCALIN ALLERGEN CAN F 6
分子名称:Lipocalin-Can f 6 allergen, DI(HYDROXYETHYL)ETHER
著者Yamamoto, K., Otani, T., Sugiura, K., Nakatsuji, M., Nishimura, S., Inui, T.
登録日2017-02-28
公開日2018-04-04
最終更新日2019-03-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of the dog allergen Can f 6 and structure-based implications of its cross-reactivity with the cat allergen Fel d 4.
Sci Rep, 9, 2019
3VPQ
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CRYSTAL STRUCTURE OF BOMBYX MORI SIGMA-CLASS GLUTATHIONE TRANSFERASE IN COMPLEX WITH GLUTATHIONE
分子名称:Glutathione S-transferase sigma, GLUTATHIONE, S-1,2-PROPANEDIOL, ...
著者Yamamoto, K., Higashiura, A., Nakagawa, A., Suzuki, M.
登録日2012-03-08
公開日2013-03-06
最終更新日2013-07-31
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity
Biochim.Biophys.Acta, 1830, 2013
3VPT
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CRYSTAL STRUCTURE OF BOMBYX MORI SIGMA-CLASS GLUTATHIONE TRANSFERASE IN APO FORM
分子名称:Glutathione S-transferase sigma, S-1,2-PROPANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Yamamoto, K., Higashiura, A., Suzuki, M., Nakagawa, A.
登録日2012-03-13
公開日2013-03-06
最終更新日2013-07-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity
Biochim.Biophys.Acta, 1830, 2013
5H5L
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STRUCTURE OF PROSTAGLANDIN SYNTHASE D OF NILAPARVATA LUGENS
分子名称:Glutathione s-transferase S2, GLUTATHIONE, DI(HYDROXYETHYL)ETHER, ...
著者Yamamoto, K., Higashiura, A., Suzuki, S., Nakagawa, A.
登録日2016-11-07
公開日2017-09-20
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Molecular structure of a prostaglandin D synthase requiring glutathione from the brown planthopper, Nilaparvata lugens
Biochem. Biophys. Res. Commun., 492, 2017
3A47
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CRYSTAL STRUCTURE OF ISOMALTASE FROM SACCHAROMYCES CEREVISIAE
分子名称:Oligo-1,6-glucosidase, CALCIUM ION
著者Yamamoto, K., Miyake, H., Kusunoki, M., Osaki, S.
登録日2009-07-01
公開日2010-07-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Crystal structure of isomaltase from Saccharomyces cerevisiae
To be Published
3A4A
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CRYSTAL STRUCTURE OF ISOMALTASE FROM SACCHAROMYCES CEREVISIAE
分子名称:Oligo-1,6-glucosidase, ALPHA-D-GLUCOSE, CALCIUM ION
著者Yamamoto, K., Miyake, H., Kusunoki, M., Osaki, S.
登録日2009-07-01
公開日2010-07-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of isomaltase from Saccharomyces cerevisiae and in complex with its competitive inhibitor maltose
Febs J., 277, 2010
3AJ7
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CRYSTAL STRUCTURE OF ISOMALTASE FROM SACCHAROMYCES CEREVISIAE
分子名称:Oligo-1,6-glucosidase, CALCIUM ION
著者Yamamoto, K., Miyake, H., Kusunoki, M., Osaki, S.
登録日2010-05-26
公開日2010-08-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structures of isomaltase from Saccharomyces cerevisiae and in complex with its competitive inhibitor maltose
Febs J., 277, 2010
3AXH
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CRYSTAL STRUCTURE OF ISOMALTASE IN COMPLEX WITH ISOMALTOSE
分子名称:Oligo-1,6-glucosidase IMA1, ALPHA-D-GLUCOSE, CALCIUM ION
著者Yamamoto, K., Miyake, H., Kusunoki, M., Osaki, S.
登録日2011-04-06
公開日2011-10-05
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Steric hindrance by 2 amino acid residues determines the substrate specificity of isomaltase from Saccharomyces cerevisiae
J.Biosci.Bioeng., 112, 2011
3AXI
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CRYSTAL STRUCTURE OF ISOMALTASE IN COMPLEX WITH MALTOSE
分子名称:Oligo-1,6-glucosidase IMA1, ALPHA-D-GLUCOSE, CALCIUM ION
著者Yamamoto, K., Miyake, H., Kusunoki, M., Osaki, S.
登録日2011-04-06
公開日2011-10-05
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Steric hindrance by 2 amino acid residues determines the substrate specificity of isomaltase from Saccharomyces cerevisiae
J.Biosci.Bioeng., 112, 2011
3VUR
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CRYSTAL STRUCTURE OF BOMBYX MORI SIGMA-CLASS GLUTATHIONE TRANSFERASE IN COMPLEX WITH GLUTATHIONESULFONIC ACID
分子名称:Glutathione S-transferase sigma, PENTAETHYLENE GLYCOL, GLUTATHIONE SULFONIC ACID
著者Yamamoto, K., Higashiura, A., Nakagawa, A., Suzuki, M.
登録日2012-07-05
公開日2013-07-10
実験手法X-RAY DIFFRACTION (1.365 Å)
主引用文献Crystal structure of Bombyx mori sigma-class glutathione transferase in complex with glutathionesulfonic acid
TO BE PUBLISHED
3WCZ
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CRYSTAL STRUCTURE OF BOMBYX MORI ALDO-KETO REDUCTASE (AKR2E4) IN COMPLEX WITH NADP
分子名称:Aldo-keto reductase 2E, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, 1,2-ETHANEDIOL, ...
著者Yamamoto, K., Wilson, D.K.
登録日2013-06-05
公開日2014-01-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Identification, characterization, and crystal structure of an aldo-keto reductase (AKR2E4) from the silkworm Bombyx mori.
Arch.Biochem.Biophys., 538, 2013
3WD6
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CRYSTAL STRUCTURE OF BOMBYX MORI OMEGA-CLASS GLUTATHIONE TRANSFERASE IN COMPLEX WITH GSH
分子名称:Omega-class glutathione S-transferase, POTASSIUM ION, 1,2-ETHANEDIOL, ...
著者Yamamoto, K., Suzuki, M., Higashiura, A., Nakagawa, A.
登録日2013-06-07
公開日2014-07-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three-dimensional structure of a Bombyx mori Omega-class glutathione transferase.
Biochem.Biophys.Res.Commun., 438, 2013
3WYW
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STRUCTURAL CHARACTERIZATION OF CATALYTIC SITE OF A NILAPARVATA LUGENS DELTA-CLASS GLUTATHIONE TRANSFERASE
分子名称:Glutathione S-transferase, GLUTATHIONE, 1,2-ETHANEDIOL
著者Yamamoto, K., Higashiura, A., Nakagawa, A.
登録日2014-09-09
公開日2015-01-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of the catalytic site of a Nilaparvata lugens delta-class glutathione transferase.
Arch.Biochem.Biophys., 566C, 2014
5AZ0
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CRYSTAL STRUCTURE OF ALDO-KETO REDUCTASE (AKR2E5) OF THE SILKWORM, BOMBYX MORI
分子名称:Uncharacterized protein, CALCIUM ION, 1,2-ETHANEDIOL, ...
著者Yamamoto, K., Higashiura, A., Suzuki, M., Nakagawa, A.
登録日2015-09-15
公開日2016-02-10
最終更新日2016-05-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
5AZ1
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CRYSTAL STRUCTURE OF ALDO-KETO REDUCTASE (AKR2E5) COMPLEXED WITH NADPH
分子名称:Uncharacterized protein, CALCIUM ION, 1,2-ETHANEDIOL, ...
著者Yamamoto, K., Higashiura, A., Suzuki, M., Nakagawa, A.
登録日2015-09-15
公開日2016-02-10
最終更新日2016-05-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
5ZFG
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CRYSTAL STRUCTURE OF A DIAZINON-METABOLIZING GLUTATHIONE S-TRANSFERASE IN THE SILKWORM, BOMBYX MORI
分子名称:Glutathione S-transferase, 1,2-ETHANEDIOL, ACETATE ION
著者Yamamoto, K., Higashiura, A., Nakagawa, A.
登録日2018-03-06
公開日2018-09-12
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a diazinon-metabolizing glutathione S-transferase in the silkworm, Bombyx mori
To Be Published
3VK9
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CRYSTAL STRUCTURE OF DELTA-CLASS GLUTATHIONE TRANSFERASE FROM SILKMOTH
分子名称:Glutathione S-transferase delta, GLYCEROL
著者Kakuta, Y., Usuda, K., Higashiura, A., Suzuki, M., Nakagawa, A., Kimura, M., Yamamoto, K.
登録日2011-11-10
公開日2012-10-03
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase
Biochim.Biophys.Acta, 1820, 2012
6AD9
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CRYSTAL STRUCTURE OF PPARGAMMA LIGAND BINDING DOMAIN IN COMPLEX WITH DIBENZOOXEPINE DERIVATIVE COMPOUND-9
分子名称:Peroxisome proliferator-activated receptor gamma, 12-mer peptide from Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, 3-[(1E)-1-{8-[(4-methyl-2-propyl-1H-benzimidazol-1-yl)methyl]dibenzo[b,e]oxepin-11(6H)-ylidene}ethyl]-1,2,4-oxadiazol-5(4H)-one
著者Takahashi, Y., Suzuki, M., Yamamoto, K., Saito, J.
登録日2018-07-31
公開日2018-11-14
最終更新日2018-12-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Development of Dihydrodibenzooxepine Peroxisome Proliferator-Activated Receptor (PPAR) Gamma Ligands of a Novel Binding Mode as Anticancer Agents: Effective Mimicry of Chiral Structures by Olefinic E/ Z-Isomers.
J. Med. Chem., 61, 2018
3JCJ
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STRUCTURES OF RIBOSOME-BOUND INITIATION FACTOR 2 REVEAL THE MECHANISM OF SUBUNIT ASSOCIATION
分子名称:5S ribosomal RNA, 30S ribosomal protein S18, 30S ribosomal protein S21, ...
著者Sprink, T., Ramrath, D.J.F., Yamamoto, H., Yamamoto, K., Loerke, J., Ismer, J., Hildebrand, P.W., Scheerer, P., Buerger, J., Mielke, T., Spahn, C.M.T.
登録日2015-12-18
公開日2016-03-09
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association.
Sci Adv, 2, 2016
3JCN
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STRUCTURES OF RIBOSOME-BOUND INITIATION FACTOR 2 REVEAL THE MECHANISM OF SUBUNIT ASSOCIATION: INITIATION COMPLEX I
分子名称:50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, ...
著者Sprink, T., Ramrath, D.J.F., Yamamoto, H., Yamamoto, K., Loerke, J., Ismer, J., Hildebrand, P.W., Scheerer, P., Buerger, J., Mielke, T., Spahn, C.M.T.
登録日2016-01-04
公開日2016-03-09
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association.
Sci Adv, 2, 2016
5FLX
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MAMMALIAN 40S HCV-IRES COMPLEX
分子名称:18S RRNA, 40S RIBOSOMAL PROTEIN SA, 40S RIBOSOMAL PROTEIN S3A, ...
著者Yamamoto, H., Collier, M., Loerke, J., Ismer, J., Schmidt, A., Hilal, T., Sprink, T., Yamamoto, K., Mielke, T., Burger, J., Shaikh, T.R., Dabrowski, M., Hildebrand, P.W., Scheerer, P., Spahn, C.M.T.
登録日2015-10-28
公開日2015-12-23
最終更新日2017-08-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Molecular Architecture of the Ribosome-Bound Hepatitis C Virus Internal Ribosomal Entry Site RNA.
Embo J., 34, 2015
2ZXQ
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CRYSTAL STRUCTURE OF ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE FROM BIFIDOBACTERIUM LONGUM (ENGBF)
分子名称:Endo-alpha-N-acetylgalactosaminidase, MANGANESE (II) ION, (4S)-2-METHYL-2,4-PENTANEDIOL
著者Suzuki, R., Katayama, T., Ashida, H., Yamamoto, K., Kitaoka, M., Fushinobu, S.
登録日2009-01-05
公開日2009-06-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and mutational analyses of substrate recognition of endo-{alpha}-N-acetylgalactosaminidase from Bifidobacterium longum.
J.Biochem., 2009