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1Y43
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crystal structure of aspergilloglutamic peptidase from Aspergillus niger
Descriptor: Aspergillopepsin II heavy chain, Aspergillopepsin II light chain, SULFATE ION
Authors:Sasaki, H, Nakagawa, A, Iwata, S, Muramatsu, T, Suganuma, M, Sawano, Y, Kojima, M, Kubota, K, Takahashi, K.
Deposit date:2004-11-30
Release date:2005-12-13
Last modified:2013-02-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The three-dimensional structure of aspergilloglutamic peptidase from Aspergillus niger
Proc.Jpn.Acad.,Ser.B, 80, 2004
3TRS
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BU of 3trs by Molmil
The crystal structure of aspergilloglutamic peptidase from Aspergillus niger
Descriptor: Aspergillopepsin-2 heavy chain, Aspergillopepsin-2 light chain, DIMETHYL SULFOXIDE
Authors:Sasaki, H, Kubota, K, Lee, W.C, Ohtsuka, J, Kojima, M, Takahashi, K, Tanokura, M.
Deposit date:2011-09-10
Release date:2012-08-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of an intermediate dimer of aspergilloglutamic peptidase that mimics the enzyme-activation product complex produced upon autoproteolysis.
J.Biochem., 152, 2012
4HE7
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BU of 4he7 by Molmil
Crystal Structure of Brazzein
Descriptor: Defensin-like protein, SODIUM ION
Authors:Nagata, K, Hongo, N, Kameda, Y, Yamamura, A, Sasaki, H, Lee, W.C, Ishikawa, K, Suzuki, E, Tanokura, M.
Deposit date:2012-10-03
Release date:2013-03-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of brazzein, a sweet-tasting protein from the wild African plant Pentadiplandra brazzeana
Acta Crystallogr.,Sect.D, 69, 2013
1VFR
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THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI
Descriptor: FLAVIN MONONUCLEOTIDE, NAD(P)H:FMN OXIDOREDUCTASE
Authors:Koike, H, Sasaki, H, Kobori, T, Zenno, S, Saigo, K, Murphy, M.E.P, Adman, E.T, Tanokura, M.
Deposit date:1998-01-09
Release date:1999-02-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 A crystal structure of the major NAD(P)H:FMN oxidoreductase of a bioluminescent bacterium, Vibrio fischeri: overall structure, cofactor and substrate-analog binding, and comparison with related flavoproteins.
J.Mol.Biol., 280, 1998
1F5V
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STRUCTURE AND SITE-DIRECTED MUTAGENESIS OF A FLAVOPROTEIN FROM ESCHERICHIA COLI THAT REDUCES NITROCOMPOUNDS. ALTERATION OF PYRIDINE NUCLEOTIDE BINDING BY A SINGLE AMINO ACID SUBSTITUTION
Descriptor: FLAVIN MONONUCLEOTIDE, OXYGEN-INSENSITIVE NADPH NITROREDUCTASE
Authors:Kobori, T, Sasaki, H, Lee, W.C, Zenno, S, Saigo, K, Murphy, M.E.P, Tanokura, M.
Deposit date:2000-06-17
Release date:2001-02-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and site-directed mutagenesis of a flavoprotein from Escherichia coli that reduces nitrocompounds: alteration of pyridine nucleotide binding by a single amino acid substitution.
J.Biol.Chem., 276, 2001
1V5Y
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BU of 1v5y by Molmil
Binding of coumarins to NAD(P)H:FMN oxidoreductase
Descriptor: 4-HYDROXY-2H-CHROMEN-2-ONE, FLAVIN MONONUCLEOTIDE, Major NAD(P)H-flavin oxidoreductase
Authors:Kobori, T, Koike, H, Sasaki, H, Zenno, S, Saigo, K, Tanokura, M.
Deposit date:2003-11-26
Release date:2005-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Binding of coumarins to NAD(P)H:FMN oxidoreductase
To be Published
1V5Z
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Binding of coumarins to NAD(P)H:FMN oxidoreductase
Descriptor: (2E)-3-(2-HYDROXYPHENYL)ACRYLIC ACID, FLAVIN MONONUCLEOTIDE, Major NAD(P)H-flavin oxidoreductase
Authors:Kobori, T, Koike, H, Sasaki, H, Zenno, S, Saigo, K, Tanokura, M.
Deposit date:2003-11-26
Release date:2005-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of coumarins to NAD(P)H:FMN oxidoreductase
To be Published
2W4H
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BU of 2w4h by Molmil
Isometrically contracting insect asynchronous flight muscle quick frozen after a quick release step
Descriptor: MYOSIN HEAVY CHAIN, SKELETAL MUSCLE, ADULT, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-11-25
Release date:2010-08-25
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Changes in Isometrically Contracting Insect Flight Muscle Trapped Following a Mechanical Perturbation.
Plos One, 7, 2012
2W4A
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ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE
Descriptor: MYOSIN HEAVY CHAIN, SKELETAL MUSCLE, ADULT, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-11-24
Release date:2010-04-14
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Electron Tomography of Cryofixed, Isometrically Contracting Insect Flight Muscle Reveals Novel Actin-Myosin Interactions
Plos One, 5, 2010
2W4G
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ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE QUICK FROZEN AFTER A QUICK STRETCH STEP
Descriptor: MYOSIN HEAVY CHAIN, SKELETAL MUSCLE, ADULT, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-11-25
Release date:2010-08-25
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Electron Tomography of Cryofixed, Isometrically Contracting Insect Flight Muscle Reveals Novel Actin-Myosin Interactions
Plos One, 5, 2010
2W4T
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ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE
Descriptor: MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE, MYOSIN HEAVY CHAIN, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-12-02
Release date:2010-01-19
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Electron Tomography of Cryofixed, Isometrically Contracting Insect Flight Muscle Reveals Novel Actin-Myosin Interactions
Plos One, 5, 2010
2W4V
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BU of 2w4v by Molmil
Isometrically contracting insect asynchronous flight muscle quick frozen after a quick release step
Descriptor: MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE, MYOSIN HEAVY CHAIN, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-12-02
Release date:2010-09-15
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Changes in Isometrically Contracting Insect Flight Muscle Trapped Following a Mechanical Perturbation.
Plos One, 7, 2012
2W49
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ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE
Descriptor: ACTIN, ALPHA SKELETAL MUSCLE, CALCIUM ION, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-11-24
Release date:2010-05-05
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Electron Tomography of Cryofixed, Isometrically Contracting Insect Flight Muscle Reveals Novel Actin-Myosin Interactions
Plos One, 5, 2010
2W4U
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BU of 2w4u by Molmil
Isometrically contracting insect asynchronous flight muscle quick frozen after a length step
Descriptor: ACTIN, ALPHA SKELETAL MUSCLE, TROPOMYOSIN ALPHA-1 CHAIN, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-12-02
Release date:2010-08-25
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Changes in Isometrically Contracting Insect Flight Muscle Trapped Following a Mechanical Perturbation.
Plos One, 7, 2012
2W4W
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BU of 2w4w by Molmil
Isometrically contracting insect asynchronous flight muscle quick frozen after a quick stretch step
Descriptor: MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE, MYOSIN HEAVY CHAIN, ...
Authors:Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
Deposit date:2008-12-02
Release date:2010-08-25
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Changes in Isometrically Contracting Insect Flight Muscle Trapped Following a Mechanical Perturbation.
Plos One, 7, 2012
5ZE9
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BU of 5ze9 by Molmil
Crystal structure of AMP-PNP bound mutant A3B3 complex from Enterococcus hirae V-ATPase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MAGNESIUM ION, ...
Authors:Maruyama, S, Suzuki, K, Sasaki, H, Mizutani, K, Saito, Y, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Ichiro, Y, Murata, T.
Deposit date:2018-02-27
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Metastable asymmetrical structure of a shaftless V1motor.
Sci Adv, 5, 2019
1ZOV
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BU of 1zov by Molmil
Crystal Structure of Monomeric Sarcosine Oxidase from Bacillus sp. NS-129
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase
Authors:Nagata, K, Sasaki, H, Ohtsuka, J, Hua, M, Okai, M, Kubota, K, Kamo, M, Ito, K, Ichikawa, T, Koyama, Y, Tanokura, M.
Deposit date:2005-05-14
Release date:2006-05-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of monomeric sarcosine oxidase from Bacillus sp. NS-129 reveals multiple conformations at the active-site loop
PROC.JPN.ACAD.,SER.B, 81, 2005
1IJ6
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BU of 1ij6 by Molmil
CA2+-BOUND STRUCTURE OF MULTIDOMAIN EF-HAND PROTEIN, CBP40, FROM TRUE SLIME MOLD
Descriptor: CALCIUM ION, PLASMODIAL SPECIFIC LAV1-2 PROTEIN
Authors:Iwasaki, W, Sasaki, H, Nakamura, A, Kohama, K, Tanokura, M.
Deposit date:2001-04-25
Release date:2003-02-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Metal-Free and Ca(2+)-Bound Structures of a Multidomain EF-Hand Protein, CBP40, from the Lower Eukaryote Physarum polycephalum
Structure, 11, 2003
1IJ5
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BU of 1ij5 by Molmil
METAL-FREE STRUCTURE OF MULTIDOMAIN EF-HAND PROTEIN, CBP40, FROM TRUE SLIME MOLD
Descriptor: PLASMODIAL SPECIFIC LAV1-2 PROTEIN
Authors:Iwasaki, W, Sasaki, H, Nakamura, A, Kohama, K, Tanokura, M.
Deposit date:2001-04-25
Release date:2003-02-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Metal-Free and Ca(2+)-Bound Structures of a Multidomain EF-Hand Protein, CBP40, from the Lower Eukaryote Physarum polycephalum
Structure, 11, 2003
7C7V
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BU of 7c7v by Molmil
Vitamin D3 receptor/lithochoric acid derivative complex
Descriptor: (4R)-4-[(3R,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid, FORMIC ACID, Mediator of RNA polymerase II transcription subunit 1, ...
Authors:Masuno, H, Numoto, N, Kagechika, H, Ito, N.
Deposit date:2020-05-26
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lithocholic Acid Derivatives as Potent Vitamin D Receptor Agonists.
J.Med.Chem., 64, 2021
7C7W
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Vitamin D3 receptor/lithochoric acid derivative complex
Descriptor: (4R)-4-[(3S,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid, FORMIC ACID, Mediator of RNA polymerase II transcription subunit 1, ...
Authors:Masuno, H, Numoto, N, Kagechika, H, Ito, N.
Deposit date:2020-05-26
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Lithocholic Acid Derivatives as Potent Vitamin D Receptor Agonists.
J.Med.Chem., 64, 2021
2CXI
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BU of 2cxi by Molmil
Crystal Structure Of An N-terminal Fragment Of The Phenylalanyl-tRNA Synthetase Beta-Subunit From Pyrococcus Horikoshii
Descriptor: Phenylalanyl-tRNA synthetase beta chain
Authors:Sasaki, H, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-29
Release date:2006-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural and mutational studies of the amino acid-editing domain from archaeal/eukaryal phenylalanyl-tRNA synthetase
Proc.Natl.Acad.Sci.Usa, 103, 2006
4GZN
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BU of 4gzn by Molmil
Mouse ZFP57 zinc fingers in complex with methylated DNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Liu, Y, Zhang, X, Cheng, X.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence.
Genes Dev., 26, 2012
1AS7
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BU of 1as7 by Molmil
STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE
Descriptor: COPPER (II) ION, NITRITE REDUCTASE
Authors:Murphy, M.E.P, Adman, E.T, Turley, S.
Deposit date:1997-08-13
Release date:1998-02-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis. Mechanistic implications.
J.Biol.Chem., 272, 1997
1NTD
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BU of 1ntd by Molmil
STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE MUTANT M150E THAT CONTAINS ZINC
Descriptor: COPPER (II) ION, NITRITE REDUCTASE
Authors:Murphy, M.E.P, Adman, E.T, Turley, S.
Deposit date:1995-07-03
Release date:1996-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Alcaligenes faecalis nitrite reductase and a copper site mutant, M150E, that contains zinc.
Biochemistry, 34, 1995

 

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