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2PYG
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BU of 2pyg by Molmil
Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module
Descriptor: CALCIUM ION, GLYCEROL, Poly(beta-D-mannuronate) C5 epimerase 4
Authors:Rozeboom, H.J, Bjerkan, T.M, Kalk, K.H, Ertesvag, H, Holtan, S, Aachmann, F.L, Valla, S, Dijkstra, B.W.
Deposit date:2007-05-16
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Mutational Characterization of the Catalytic A-module of the Mannuronan C-5-epimerase AlgE4 from Azotobacter vinelandii.
J.Biol.Chem., 283, 2008
2PYH
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BU of 2pyh by Molmil
Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide
Descriptor: CALCIUM ION, Poly(beta-D-mannuronate) C5 epimerase 4, alpha-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid
Authors:Rozeboom, H.J, Bjerkan, T.M, Kalk, K.H, Ertesvag, H, Holtan, S, Aachman, F.L, Valla, S, Dijkstra, B.W.
Deposit date:2007-05-16
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Mutational Characterization of the Catalytic A-module of the Mannuronan C-5-epimerase AlgE4 from Azotobacter vinelandii.
J.Biol.Chem., 283, 2008
4CVB
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BU of 4cvb by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes
Descriptor: ALCOHOL DEHYDROGENASE, CALCIUM ION, CHLORIDE ION, ...
Authors:Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
Deposit date:2014-03-25
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
4CVC
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BU of 4cvc by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes with zinc in the active site
Descriptor: ALCOHOL DEHYDROGENASE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
Deposit date:2014-03-25
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
4AMW
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BU of 4amw by Molmil
CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride
Descriptor: 5-fluoro-alpha-L-idopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL, ...
Authors:Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
Deposit date:2012-03-14
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
4AMX
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BU of 4amx by Molmil
CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride
Descriptor: 5-fluoro-beta-D-glucopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL, ...
Authors:Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
Deposit date:2012-03-14
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
4C2L
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BU of 4c2l by Molmil
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDO-XYLOGALACTURONAN HYDROLASE A, ...
Authors:Rozeboom, H.J, Beldman, G, Schols, H.A, Dijkstra, B.W.
Deposit date:2013-08-19
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Endo-Xylogalacturonan Hydrolase from Aspergillus Tubingensis.
FEBS J., 280, 2013
4CCW
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BU of 4ccw by Molmil
Crystal structure of naproxen esterase (carboxylesterase NP) from Bacillus subtilis
Descriptor: (2-hydroxyethoxy)acetic acid, CARBOXYL ESTERASE NP
Authors:Rozeboom, H.J, Godinho, L.F, Nardini, M, Quax, W.J, Dijkstra, B.W.
Deposit date:2013-10-29
Release date:2014-01-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structures of Two Bacillus Carboxylesterases with Different Enantioselectivities.
Biochim.Biophys.Acta, 1844, 2014
4CCY
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BU of 4ccy by Molmil
Crystal structure of carboxylesterase CesB (YbfK) from Bacillus subtilis
Descriptor: CARBOXYLESTERASE YBFK, SODIUM ION
Authors:Rozeboom, H.J, Godinho, L.F, Nardini, M, Quax, W.J, Dijkstra, B.W.
Deposit date:2013-10-29
Release date:2014-01-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal Structures of Two Bacillus Carboxylesterases with Different Enantioselectivities.
Biochim.Biophys.Acta, 1844, 2014
2X2J
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BU of 2x2j by Molmil
Crystal structure of the Gracilariopsis lemaneiformis alpha- 1,4-glucan lyase with deoxynojirimycin
Descriptor: 1-DEOXYNOJIRIMYCIN, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, CHLORIDE ION, ...
Authors:Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
Deposit date:2010-01-13
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
2X2I
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BU of 2x2i by Molmil
Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL
Authors:Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
Deposit date:2010-01-13
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
2X2H
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BU of 2x2h by Molmil
Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase
Descriptor: ACETATE ION, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, CHLORIDE ION, ...
Authors:Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
Deposit date:2010-01-13
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
6YRA
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BU of 6yra by Molmil
Crystal structure of ATP-dependent caprolactamase from Pseudomonas jessenii
Descriptor: 5-oxoprolinase, Hydantoinase, ZINC ION
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2020-04-20
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4 Å)
Cite:Catalytic and structural properties of ATP-dependent caprolactamase from Pseudomonas jessenii.
Proteins, 89, 2021
5OX2
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BU of 5ox2 by Molmil
Crystal structure of thymoligase, a substrate-tailored peptiligase variant
Descriptor: Fragment of prodomain, SULFATE ION, Subtilisin BPN'
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-09-05
Release date:2018-01-10
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Design of a substrate-tailored peptiligase variant for the efficient synthesis of thymosin-alpha1.
Org. Biomol. Chem., 16, 2018
6QZO
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BU of 6qzo by Molmil
Crystal structure of DyP-type peroxidase from Cellulomonas bogoriensis
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Peroxidase, TRIETHYLENE GLYCOL
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2019-03-12
Release date:2019-04-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a New DyP-Peroxidase from the Alkaliphilic Cellulomonad, Cellulomonas bogoriensis.
Molecules, 24, 2019
3BMV
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BU of 3bmv by Molmil
Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P
Descriptor: CALCIUM ION, Cyclomaltodextrin glucanotransferase, GLYCEROL, ...
Authors:Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
Deposit date:2007-12-13
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
3BMW
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BU of 3bmw by Molmil
Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P complexed with a maltoheptaose inhibitor
Descriptor: 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
Deposit date:2007-12-13
Release date:2008-05-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
5NH4
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BU of 5nh4 by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with one Mg2+ ions and glycerol
Descriptor: GLYCEROL, MAGNESIUM ION, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHD
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BU of 5nhd by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with 2 Ni2+ ions and xylose
Descriptor: D-xylose, NICKEL (II) ION, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
8P2A
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BU of 8p2a by Molmil
Crystal structure of SaFMN3 domain 2
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-binding domain-containing protein
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2023-05-15
Release date:2023-07-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of two bacterial multi-flavinylated proteins harboring multiple covalent flavin cofactors.
Bba Adv, 4, 2023
8P2B
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BU of 8p2b by Molmil
Crystal structure of CbFMN4 domain 1
Descriptor: Clostridiaceae bacterium FMN4 domain 1, FLAVIN MONONUCLEOTIDE
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2023-05-15
Release date:2023-07-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Characterization of two bacterial multi-flavinylated proteins harboring multiple covalent flavin cofactors.
Bba Adv, 4, 2023
8Q5E
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BU of 8q5e by Molmil
Crystal structure of PpSB1-LOV protein from Pseudomonas putida with covalent FMN
Descriptor: FLAVIN MONONUCLEOTIDE, NICKEL (II) ION, Sensory box protein
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2023-08-09
Release date:2023-11-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Fixing Flavins: Hijacking a Flavin Transferase for Equipping Flavoproteins with a Covalent Flavin Cofactor.
J.Am.Chem.Soc., 145, 2023
8Q5G
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BU of 8q5g by Molmil
Crystal structure of nitroreductase from Bacillus tequilensis with covalent FMN
Descriptor: FLAVIN MONONUCLEOTIDE, NAD(P)H-dependent oxidoreductase
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2023-08-09
Release date:2023-11-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fixing Flavins: Hijacking a Flavin Transferase for Equipping Flavoproteins with a Covalent Flavin Cofactor.
J.Am.Chem.Soc., 145, 2023
8Q5F
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BU of 8q5f by Molmil
Crystal structure of miniSOG protein from Arabidopsis thaliana with covalent FMN
Descriptor: FLAVIN MONONUCLEOTIDE, miniSOG
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2023-08-09
Release date:2023-11-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fixing Flavins: Hijacking a Flavin Transferase for Equipping Flavoproteins with a Covalent Flavin Cofactor.
J.Am.Chem.Soc., 145, 2023
6Z1X
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BU of 6z1x by Molmil
Crystal structure of human steroid carrier protein SL (SCP-2L) mutant V83C
Descriptor: OXTOXYNOL-10, Peroxisomal multifunctional enzyme type 2, SULFATE ION
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2020-05-14
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Engineering Thermostability in Artificial Metalloenzymes to Increase Catalytic Activity
Acs Catalysis, 11, 2021

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