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2FGL
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BU of 2fgl by Molmil
An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27
Descriptor: MAGNESIUM ION, alkaline thermostable endoxylanase, alpha-D-xylopyranose, ...
Authors:Ramakumar, S, Manikandan, K, Bhardwaj, A, Reddy, V.S, Lokanath, N.K, Ghosh, A.
Deposit date:2005-12-22
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of native and xylosaccharide-bound alkali thermostable xylanase from an alkalophilic Bacillus sp. NG-27: structural insights into alkalophilicity and implications for adaptation to polyextreme conditions.
Protein Sci., 15, 2006
2F8Q
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BU of 2f8q by Molmil
An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27
Descriptor: MAGNESIUM ION, alkaline thermostable endoxylanase
Authors:Ramakumar, S, Manikandan, K, Bhardwaj, A, Ghosh, A, Reddy, V.S.
Deposit date:2005-12-03
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of native and xylosaccharide-bound alkali thermostable xylanase from an alkalophilic Bacillus sp. NG-27: structural insights into alkalophilicity and implications for adaptation to polyextreme conditions.
Protein Sci., 15, 2006
1C74
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BU of 1c74 by Molmil
Structure of the double mutant (K53,56M) of phospholipase A2
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Sekar, K, Tsai, M.D, Jain, M.K, Ramakumar, S.
Deposit date:2000-01-22
Release date:2000-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of the anionic interface preference and k*cat activation of pancreatic phospholipase A2.
Biochemistry, 39, 2000
8HKR
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BU of 8hkr by Molmil
Crystal Structure of Histone H3 Lysine 79 (H3K79) Methyltransferase Rv2067c from Mycobacterium tuberculosis
Descriptor: PHOSPHATE ION, Protein lysine methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Dadireddy, V, Singh, P.R, Kalladi, S.M, Valakunja, N, Ramakumar, S.
Deposit date:2022-11-28
Release date:2023-10-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Mycobacterium tuberculosis methyltransferase Rv2067c manipulates host epigenetic programming to promote its own survival.
Nat Commun, 14, 2023
4DKY
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BU of 4dky by Molmil
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Descriptor: DNA-binding protein HU homolog, MANGANESE (II) ION
Authors:Bhowmick, T, Ramagopal, U.A, Ghosh, S, Nagaraja, V, Ramakumar, S.
Deposit date:2012-02-05
Release date:2013-02-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.478 Å)
Cite:Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors
Nat Commun, 5, 2014
6ID6
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BU of 6id6 by Molmil
Crystal structure of Rv0731c from Mycobacterium tuberculosis at 1.63 Angstroms.
Descriptor: MAGNESIUM ION, Putative S-adenosyl-L-methionine-dependent methyltransferase Rv0731c, TRIETHYLENE GLYCOL
Authors:Bansia, H, Kalladi, S.M, Nagaraja, V, Ramakumar, S.
Deposit date:2018-09-08
Release date:2019-09-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of Rv0731c from Mycobacterium tuberculosis.
To Be Published
1TUX
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BU of 1tux by Molmil
HIGH RESOLUTION CRYSTAL STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS
Descriptor: XYLANASE
Authors:Natesh, R, Bhanumoorthy, P, Vithayathil, P.J, Sekar, K, Ramakumar, S, Viswamitra, M.A.
Deposit date:1998-10-29
Release date:1999-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure at 1.8 A resolution and proposed amino acid sequence of a thermostable xylanase from Thermoascus aurantiacus.
J.Mol.Biol., 288, 1999
5GO6
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BU of 5go6 by Molmil
Structure of sortase E T196V mutant from Streptomyces avermitilis
Descriptor: Putative secreted protein, SULFATE ION
Authors:Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of sortase E T196V mutant from Streptomyces avermitilis
To Be Published
5GO5
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BU of 5go5 by Molmil
Structure of sortase E from Streptomyces avermitilis
Descriptor: GLYCINE, SULFATE ION, sortase
Authors:Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and specificity of a new class of Ca2+-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference.
J. Biol. Chem., 292, 2017
4O8L
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BU of 4o8l by Molmil
Structure of sortase A from Streptococcus pneumoniae
Descriptor: Sortase
Authors:Misra, A, Biswas, T, Das, S, Marathe, U, Roy, R.P, Ramakumar, S.
Deposit date:2013-12-28
Release date:2015-01-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of sortase A from Streptococcus pneumoniae
To be Published
4QCE
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BU of 4qce by Molmil
Crystal structure of recombinant alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Alkaline thermostable endoxylanase, MAGNESIUM ION, SODIUM ION
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2014-05-11
Release date:2015-05-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (beta/alpha)8-triosephosphate isomerase barrel enzyme
Febs J., 282, 2015
4QCF
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BU of 4qcf by Molmil
Crystal structure of N-terminal mutant (V1A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Alkaline thermostable endoxylanase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2014-05-11
Release date:2015-05-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (beta/alpha)8-triosephosphate isomerase barrel enzyme
Febs J., 282, 2015
1I1W
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BU of 1i1w by Molmil
0.89A Ultra high resolution structure of a Thermostable Xylanase from Thermoascus Aurantiacus
Descriptor: ACETONE, ENDO-1,4-BETA-XYLANASE, ETHANOL, ...
Authors:Natesh, R, Ramakumar, S, Viswamitra, M.A.
Deposit date:2001-02-04
Release date:2003-01-07
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Thermostable xylanase from Thermoascus aurantiacus at ultrahigh resolution (0.89 A) at 100 K and atomic resolution (1.11 A) at 293 K refined anisotropically to small-molecule accuracy.
Acta Crystallogr.,Sect.D, 59, 2003
1I1X
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BU of 1i1x by Molmil
1.11 A ATOMIC RESOLUTION STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS
Descriptor: ENDO-1,4-BETA-XYLANASE
Authors:Natesh, R, Ramakumar, S, Viswamitra, M.A.
Deposit date:2001-02-04
Release date:2003-01-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Thermostable xylanase from Thermoascus aurantiacus at ultrahigh resolution (0.89 A) at 100 K and atomic resolution (1.11 A) at 293 K refined anisotropically to small-molecule accuracy.
Acta Crystallogr.,Sect.D, 59, 2003
2PBQ
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BU of 2pbq by Molmil
Crystal structure of molybdenum cofactor biosynthesis (aq_061) From aquifex aeolicus VF5
Descriptor: Molybdenum cofactor biosynthesis MOG
Authors:Jeyakanthan, J, Mahesh, S, Kanaujia, S.P, Ramakumar, S, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of molybdenum cofactor biosynthesis (aq_061) from aquifex aeolicus VF5
to be published
2QQ1
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BU of 2qq1 by Molmil
Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
Descriptor: Molybdenum cofactor biosynthesis MOG
Authors:Jeyakanthan, J, Mahesh, S, Kanaujia, S.P, Ramakumar, S, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-07-26
Release date:2008-07-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
To be Published
1VRZ
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BU of 1vrz by Molmil
Helix turn helix motif
Descriptor: ACETATE ION, DE NOVO DESIGNED 21 RESIDUE PEPTIDE
Authors:Rudresh, Ramakumar, S, Ramagopal, U.A, Inai, Y, Sahal, D.
Deposit date:2005-10-14
Release date:2005-11-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:De Novo Design and Characterization of a Helical Hairpin Eicosapeptide; Emergence of an Anion Receptor in the Linker Region.
Structure, 12, 2004
5KZK
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BU of 5kzk by Molmil
Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
Descriptor: COBALT (II) ION, Probable RNA methyltransferase, TrmH family, ...
Authors:Dey, D, Hegde, R.P, Almo, S.C, Ramakumar, S, Ramagopal, U.A, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-07-25
Release date:2017-08-02
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
To Be Published
5L0Z
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BU of 5l0z by Molmil
Crystal Structure of AdoMet bound rRNA methyltransferase from Sinorhizobium meliloti
Descriptor: COBALT (II) ION, Probable RNA methyltransferase, TrmH family, ...
Authors:Dey, D, Hegde, R.P, Almo, S.C, Ramakumar, S, Ramagopal, U.A.
Deposit date:2016-07-28
Release date:2017-08-02
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of AdoMet bound rRNA methyltransferase from Sinorhizobium meliloti
To Be Published
4O8T
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BU of 4o8t by Molmil
Structure of sortase A C207A mutant from Streptococcus pneumoniae
Descriptor: GLYCEROL, Sortase
Authors:Misra, A, Biswas, T, Das, S, Marathe, U, Roy, R.P, Ramakumar, S.
Deposit date:2013-12-30
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure of sortase A C207A mutant from Streptococcus pneumoniae
To be Published
4PT4
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BU of 4pt4 by Molmil
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Descriptor: DNA-binding protein HU homolog, FORMIC ACID
Authors:Bhowmick, T, Ramagopal, U.A, Ghosh, S, Nagaraja, V, Ramakumar, S.
Deposit date:2014-03-10
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors
Nat Commun, 5, 2014
1KEB
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BU of 1keb by Molmil
Crystal Structure of Double Mutant M37L,P40S E.coli Thioredoxin
Descriptor: COPPER (II) ION, Thioredoxin 1
Authors:Rudresh, Jain, R, Dani, V, Mitra, A, Srivastava, S, Sarma, S.P, Varadarajan, R, Ramakumar, S.
Deposit date:2001-11-15
Release date:2002-11-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Consequences of Replacement of an alpha-helical Pro Residue in E.coli Thioredoxin
PROTEIN ENG., 15, 2002
5Z3J
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BU of 5z3j by Molmil
Crystal Structure of Abrin A chain (Recombinant) in complex with Nicotinamide at 1.7 Angstroms
Descriptor: Abrin A-chain, IMIDAZOLE, NICOTINAMIDE
Authors:Bansia, H, Karande, A.A, Ramakumar, S.
Deposit date:2018-01-08
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10.
FEBS J., 286, 2019
5Z3I
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BU of 5z3i by Molmil
Crystal Structure of Abrin A chain (Recombinant) in complex with Adenine at 1.65 Angstroms
Descriptor: ADENINE, Abrin A-chain
Authors:Bansia, H, Karande, A.A, Ramakumar, S.
Deposit date:2018-01-08
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10.
FEBS J., 286, 2019
5Z37
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BU of 5z37 by Molmil
Crystal Structure of Abrin A chain (Recombinant) at 1.3 Angstroms
Descriptor: Abrin A-chain, IMIDAZOLE
Authors:Bansia, H, Karande, A.A, Ramakumar, S.
Deposit date:2018-01-05
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10.
FEBS J., 286, 2019

 

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