Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4N3D
DownloadVisualize
BU of 4n3d by Molmil
Crystal structure of the dimeric variant EGFP-K162Q in P61 space group
Descriptor: GLYCEROL, Green fluorescent protein, PHOSPHATE ION, ...
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2013-10-07
Release date:2014-08-27
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Three dimensional structure of the dimeric gene-engineered variant of green fluorescent protein egfp-K162Q in P61 crystal space group
Rus.J.Bioorg.Chem., 40, 2014
4ZFS
DownloadVisualize
BU of 4zfs by Molmil
Phototoxic Fluorescent Protein KillerOrange
Descriptor: KillerOrange
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.
Deposit date:2015-04-21
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.
Plos One, 10, 2015
2OGR
DownloadVisualize
BU of 2ogr by Molmil
Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution
Descriptor: FLUORESCENT PROTEIN FP538
Authors:Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-01-08
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom
Bioorg.Khim., 33
3LVD
DownloadVisualize
BU of 3lvd by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVC
DownloadVisualize
BU of 3lvc by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVA
DownloadVisualize
BU of 3lva by Molmil
Crystal structure of colorless GFP-like protein from Aequorea coerulescens
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
4ZBL
DownloadVisualize
BU of 4zbl by Molmil
Phototoxic fluorescent protein mKillerOrange
Descriptor: CITRIC ACID, GLYCEROL, Photosesitizer mKillerOrange
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-04-14
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.
Plos One, 10, 2015
6ZQO
DownloadVisualize
BU of 6zqo by Molmil
EYFP mutant - F165G
Descriptor: G protein/GFP fusion protein, SULFATE ION
Authors:Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V.
Deposit date:2020-07-10
Release date:2021-06-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Amino acid residue at the 165th position tunes EYFP chromophore maturation. A structure-based design.
Comput Struct Biotechnol J, 19, 2021
3PJB
DownloadVisualize
BU of 3pjb by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 4.0
Descriptor: GLYCEROL, Red fluorescent protein eqFP578
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-09
Release date:2011-05-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PIB
DownloadVisualize
BU of 3pib by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 5.5
Descriptor: GLYCEROL, eqFP578 fluorescent protein
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-05
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.154 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJ7
DownloadVisualize
BU of 3pj7 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 8.5
Descriptor: Red fluorescent protein eqFP578
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-08
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJ5
DownloadVisualize
BU of 3pj5 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 5.0
Descriptor: Red fluorescent protein eqFP578, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2010-11-08
Release date:2011-05-25
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
5EXB
DownloadVisualize
BU of 5exb by Molmil
Wild type green fluorescent protein DendFP (Dendronephthya sp.)
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-11-23
Release date:2016-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.
Acta Crystallogr D Struct Biol, 72, 2016
5EXC
DownloadVisualize
BU of 5exc by Molmil
Photoconverted red fluorescent protein DendRFP
Descriptor: GLYCEROL, Green fluorescent protein, MAGNESIUM ION
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-11-23
Release date:2016-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.
Acta Crystallogr D Struct Biol, 72, 2016
4EDS
DownloadVisualize
BU of 4eds by Molmil
Crystal structure of far-red fluorescent protein eqFP670
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
4EDO
DownloadVisualize
BU of 4edo by Molmil
Crystal structure of far-red fluorescent protein eqFP650
Descriptor: far-red fluorescent protein eqFP650
Authors:Pletnev, S, Pletnev, V.Z, Pletneva, N.V.
Deposit date:2012-03-27
Release date:2012-09-05
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for bathochromic shift of fluorescence in far-red fluorescent proteins eqFP650 and eqFP670.
Acta Crystallogr.,Sect.D, 68, 2012
7BHG
DownloadVisualize
BU of 7bhg by Molmil
Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A
Descriptor: Fluorescent protein FP480
Authors:Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V.
Deposit date:2021-01-11
Release date:2022-03-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Gene-engineered variant of FusionRed with Trp based chromophore - 2.1A
To Be Published
3GB3
DownloadVisualize
BU of 3gb3 by Molmil
X-ray structure of genetically encoded photosensitizer KillerRed in native form
Descriptor: KillerRed, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-02-18
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
3GL4
DownloadVisualize
BU of 3gl4 by Molmil
X-ray structure of photobleached killerred
Descriptor: KillerRed
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
4HVF
DownloadVisualize
BU of 4hvf by Molmil
Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)
Descriptor: GLYCEROL, Green fluorescent protein blFP-Y6
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2012-11-06
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JGE
DownloadVisualize
BU of 4jge by Molmil
Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-03-01
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JEO
DownloadVisualize
BU of 4jeo by Molmil
Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-02-27
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JF9
DownloadVisualize
BU of 4jf9 by Molmil
Crystal structure of the wild type red fluorescent protein lanRFP (Branchiostoma Lanceolatum)
Descriptor: Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-02-28
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4RTC
DownloadVisualize
BU of 4rtc by Molmil
Crystal structure of the green fluorescent variant, nowGFP, of the cyan Cerulean at pH 9.0
Descriptor: GLYCEROL, nowGFP
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2014-11-14
Release date:2015-09-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.
Acta Crystallogr.,Sect.D, 71, 2015
4RYS
DownloadVisualize
BU of 4rys by Molmil
Crystal structure of the green fluorescent rotein NowGFP (the variant of cyan Cerulean) at pH 4.8
Descriptor: GLYCEROL, NowGFP
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2014-12-17
Release date:2015-09-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.
Acta Crystallogr.,Sect.D, 71, 2015

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon