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1FFJ
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BU of 1ffj by Molmil
NMR STRUCTURE OF CARDIOTOXIN IN DPC-MICELLE
Descriptor: CYTOTOXIN 2
Authors:Dubovskii, P.V, Dementieva, D.V, Bocharov, E.V, Utkin, Y.N, Arseniev, A.S.
Deposit date:2000-07-25
Release date:2001-01-17
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Membrane binding motif of the P-type cardiotoxin.
J.Mol.Biol., 305, 2001
5T8A
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Recombinant cytotoxin-I from the venom of cobra N. oxiana
Descriptor: Cytotoxin 1
Authors:Dubovskii, P.V, Dubinnyi, M.A, Shulepko, M.A, Lyukmanova, E.N, Dolgikh, D.A, Kirpichnikov, M.P, Efremov, R.G.
Deposit date:2016-09-07
Release date:2017-09-20
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They?
Biochemistry, 56, 2017
5LUE
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Minor form of the recombinant cytotoxin-1 from N. oxiana
Descriptor: VC-1=CYTOTOXIN
Authors:Dubovskii, P.V, Dubinnyi, M.A, Shulepko, M.A, Lyukmanova, E.N, Dolgikh, D.A, Kirpichnikov, M.P, Efremov, R.G.
Deposit date:2016-09-08
Release date:2017-09-20
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They?
Biochemistry, 56, 2017
5NQ4
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BU of 5nq4 by Molmil
Cytotoxin-1 in DPC-micelle
Descriptor: Cytotoxin 1
Authors:Dubovskii, P.V, Dubinnyi, M.A, Volynsky, P.E, Pustovalova, Y.E, Konshina, A.G, Utkin, Y.N, Efremov, R.G, Arseniev, A.S.
Deposit date:2017-04-19
Release date:2017-12-13
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Impact of membrane partitioning on the spatial structure of an S-type cobra cytotoxin.
J. Biomol. Struct. Dyn., 36, 2018
2G9P
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NMR structure of a novel antimicrobial peptide, latarcin 2a, from spider (Lachesana tarabaevi) venom
Descriptor: antimicrobial peptide Latarcin 2a
Authors:Dubovskii, P.V, Volynsky, P.E, Polyansky, A.A, Chupin, V.V, Efremov, R.G, Arseniev, A.S.
Deposit date:2006-03-07
Release date:2006-09-12
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Spatial structure and activity mechanism of a novel spider antimicrobial peptide.
Biochemistry, 45, 2006
2PCO
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Spatial Structure and Membrane Permeabilization for Latarcin-1, a Spider Antimicrobial Peptide
Descriptor: Latarcin-1
Authors:Dubovskii, P.V, Volynsky, P.E, Polyansky, A.A, Chupin, V.V, Efremov, R.G, Arseniev, A.S.
Deposit date:2007-03-30
Release date:2008-03-18
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Three-dimensional structure/hydrophobicity of latarcins specifies their mode of membrane activity.
Biochemistry, 47, 2008
1ZAD
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Structure of cytotoxin I (CTI) from Naja Oxiana in complex with DPC micelle
Descriptor: Cytotoxin 1
Authors:Dubinnyi, M.A, Pustovalova, Y.E, Dubovskii, P.V, Utkin, Y.N, Konshina, A.G, Efremov, R.G, Arseniev, A.S.
Deposit date:2005-04-06
Release date:2006-06-20
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Interaction of three-finger toxins with phospholipid membranes: comparison of S- and P-type cytotoxins
Biochem.J., 387, 2005
1RL5
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NMR structure with tightly bound water molecule of cytotoxin I from Naja oxiana in aqueous solution (major form)
Descriptor: Cytotoxin 1
Authors:Dubinnyi, M.A, Pustovalova, Y.E, Dubovskii, P.V, Utkin, Y.N, Arseniev, A.S.
Deposit date:2003-11-25
Release date:2005-02-15
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Interaction of three-finger toxins with phospholipid membranes: comparison of S- and P-type cytotoxins.
Biochem.J., 387, 2005
2L3I
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Oxki4a, spider derived antimicrobial peptide
Descriptor: AOXKI4A, antimicrobial peptide in spider venom
Authors:Vassilevski, A.A, Dubovskii, P.V, Samsonova, O.V, Egorova, N.S, Kozlov, S.A, Feofanov, A.V, Arseniev, A.S, Grishin, E.V.
Deposit date:2010-09-14
Release date:2011-09-14
Last modified:2019-05-15
Method:SOLUTION NMR
Cite:Novel lynx spider toxin shares common molecular architecture with defense peptides from frog skin.
Febs J., 278, 2011
7QHI
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Crystal structure of cytotoxin 13 from Naja naja, hexagonal form
Descriptor: Cytotoxin 13
Authors:Samygina, V.R, Dubova, K.M, Bourenkov, G, Utkin, Y.N, Dubovskii, P.V.
Deposit date:2021-12-12
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Variability in the Spatial Structure of the Central Loop in Cobra Cytotoxins Revealed by X-ray Analysis and Molecular Modeling.
Toxins, 14, 2022
5NPN
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Refined structure of cytotoxin I
Descriptor: Cytotoxin 1
Authors:Dubinnyi, M.A, Dubovskii, P.V, Arseniev, A.S.
Deposit date:2017-04-17
Release date:2018-04-04
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They?
Biochemistry, 56, 2017
7QFC
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Crystal structure of cytotoxin 13 from Naja naja, orthorhombic form
Descriptor: Cytotoxin 13
Authors:Samygina, V.R, Dubova, K.M, Bourenkov, G, Utkin, Y.N, Dubovskii, P.V.
Deposit date:2021-12-05
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Variability in the Spatial Structure of the Central Loop in Cobra Cytotoxins Revealed by X-ray Analysis and Molecular Modeling.
Toxins, 14, 2022
1QR5
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SOLUTION STRUCTURE OF HISTIDINE CONTAINING PROTEIN (HPR) FROM STAPHYLOCOCCUS CARNOSUS
Descriptor: PHOSPHOCARRIER PROTEIN HPR
Authors:Kalbitzer, H.R, Gorler, A, Li, H, Dubovskii, P.V, Hengstenberg, W, Kowolik, C, Yamada, H, Akasaka, K.
Deposit date:1999-05-19
Release date:2000-06-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:15N and 1H NMR study of histidine containing protein (HPr) from Staphylococcus carnosus at high pressure.
Protein Sci., 9, 2000
6RC7
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BU of 6rc7 by Molmil
NMR structure of cytotoxin 3 from Naja kaouthia in solution, major form
Descriptor: Cytotoxin 3
Authors:Dubinnyi, M.A, Dubovskii, P.V, Utkin, Y.N, Arseniev, A.S.
Deposit date:2019-04-11
Release date:2020-05-13
Last modified:2021-05-26
Method:SOLUTION NMR
Cite:The omega-loop of cobra cytotoxins tolerates multiple amino acid substitutions.
Biochem.Biophys.Res.Commun., 558, 2021
7O2K
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BU of 7o2k by Molmil
NMR solution structue of cytotoxin 2 from Naja Kaouthia
Descriptor: Cytotoxin 2
Authors:Dubinnyi, M.A, Dubovskii, P.V.
Deposit date:2021-03-30
Release date:2021-06-02
Method:SOLUTION NMR
Cite:The omega-loop of cobra cytotoxins tolerates multiple amino acid substitutions.
Biochem.Biophys.Res.Commun., 558, 2021
2LB7
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Hevein-type Antifungal Peptide with a Unique 10-Cysteine Motif
Descriptor: Antimicrobial peptide 1a
Authors:Balashova, T.A, Vassilevski, A.A, Odintsova, T.I, Grishin, E.V, Egorov, T.A, Arseniev, A.S.
Deposit date:2011-03-23
Release date:2011-04-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of a defense peptide from wheat with a 10-cysteine motif.
Biochem.Biophys.Res.Commun., 411, 2011
1TXE
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Solution structure of the active-centre mutant Ile14Ala of the histidine-containing phosphocarrier protein (HPr) from Staphylococcus carnosus
Descriptor: Phosphocarrier protein HPr
Authors:Moeglich, A, Koch, B, Hengstenberg, W, Brunner, E, Kalbitzer, H.R, Structural Proteomics in Europe (SPINE)
Deposit date:2004-07-04
Release date:2005-03-08
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution structure of the active-centre mutant I14A of the histidine-containing phosphocarrier protein from Staphylococcus carnosus
Eur.J.Biochem., 271, 2004

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PDB entries from 2024-03-27

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