Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ZXQ
DownloadVisualize
BU of 1zxq by Molmil
THE CRYSTAL STRUCTURE OF ICAM-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, INTERCELLULAR ADHESION MOLECULE-2
Authors:Casasnovas, J.M, Springer, T.A, Harrison, S.C, Wang, J.-H.
Deposit date:1997-03-04
Release date:1997-09-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of ICAM-2 reveals a distinctive integrin recognition surface.
Nature, 387, 1997
1IC1
DownloadVisualize
BU of 1ic1 by Molmil
THE CRYSTAL STRUCTURE FOR THE N-TERMINAL TWO DOMAINS OF ICAM-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, INTERCELLULAR ADHESION MOLECULE-1
Authors:Casasnovas, J.M, Stehle, T, Liu, J.-H, Wang, J.-H, Springer, T.A.
Deposit date:1998-03-09
Release date:1998-06-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:A dimeric crystal structure for the N-terminal two domains of intercellular adhesion molecule-1.
Proc.Natl.Acad.Sci.USA, 95, 1998
7R4I
DownloadVisualize
BU of 7r4i by Molmil
The SARS-CoV-2 spike in complex with the 2.15 neutralizing nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Camel-derived nanobody 2.15, ...
Authors:Casasnovas, J.M, Melero, R, Arranz, R, Fernandez, L.A.
Deposit date:2022-02-08
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Nanobodies Protecting From Lethal SARS-CoV-2 Infection Target Receptor Binding Epitopes Preserved in Virus Variants Other Than Omicron.
Front Immunol, 13, 2022
7R4R
DownloadVisualize
BU of 7r4r by Molmil
The SARS-CoV-2 spike in complex with the 1.10 neutralizing nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Camel-derived nanobody 1.10, ...
Authors:Casasnovas, J.M, Melero, R, Arranz, R, Fernandez, L.A.
Deposit date:2022-02-09
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Nanobodies Protecting From Lethal SARS-CoV-2 Infection Target Receptor Binding Epitopes Preserved in Virus Variants Other Than Omicron.
Front Immunol, 13, 2022
7R4Q
DownloadVisualize
BU of 7r4q by Molmil
The SARS-CoV-2 spike in complex with the 1.29 neutralizing nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Camel-derived nanobody 1.29, ...
Authors:Casasnovas, J.M, Melero, R, Arranz, R, Fernandez, L.A.
Deposit date:2022-02-09
Release date:2022-06-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Nanobodies Protecting From Lethal SARS-CoV-2 Infection Target Receptor Binding Epitopes Preserved in Virus Variants Other Than Omicron.
Front Immunol, 13, 2022
1BQS
DownloadVisualize
BU of 1bqs by Molmil
THE CRYSTAL STRUCTURE OF MUCOSAL ADDRESSIN CELL ADHESION MOLECULE-1 (MADCAM-1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (MUCOSAL ADDRESSIN CELL ADHESION MOLECULE-1)
Authors:Tan, K, Casasnovas, J.M, Liu, J.H, Briskin, M.J, Springer, T.A, Wang, J.-H.
Deposit date:1998-08-18
Release date:1999-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of immunoglobulin superfamily domains 1 and 2 of MAdCAM-1 reveals novel features important for integrin recognition.
Structure, 6, 1998
4F5C
DownloadVisualize
BU of 4f5c by Molmil
Crystal structure of the spike receptor binding domain of a porcine respiratory coronavirus in complex with the pig aminopeptidase N ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
Authors:Santiago, C, Reguera, J, Gaurav, M, Ordono, D, Enjuanes, L, Casasnovas, J.M.
Deposit date:2012-05-13
Release date:2012-08-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural bases of coronavirus attachment to host aminopeptidase N and its inhibition by neutralizing antibodies.
Plos Pathog., 8, 2012
4F2M
DownloadVisualize
BU of 4f2m by Molmil
Crystal structure of a TGEV coronavirus Spike fragment in complex with the TGEV neutralizing monoclonal antibody 1AF10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, ...
Authors:Reguera, J, Santiago, C, Mudgal, G, Ordono, D, Enjuanes, L, Casasnovas, J.M.
Deposit date:2012-05-08
Release date:2012-08-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural bases of coronavirus attachment to host aminopeptidase N and its inhibition by neutralizing antibodies.
Plos Pathog., 8, 2012
5LG6
DownloadVisualize
BU of 5lg6 by Molmil
Structure of the deglycosylated porcine aminopeptidase N ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ZINC ION
Authors:Santiago, C, Reguera, J, Mudgal, G, Casasnovas, J.M.
Deposit date:2016-07-06
Release date:2017-04-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Allosteric inhibition of aminopeptidase N functions related to tumor growth and virus infection.
Sci Rep, 7, 2017
5LDS
DownloadVisualize
BU of 5lds by Molmil
Structure of the porcine aminopeptidase N ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Santiago, C, Reguera, J, Mudgal, G, Casasnovas, J.M.
Deposit date:2016-06-27
Release date:2017-04-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Allosteric inhibition of aminopeptidase N functions related to tumor growth and virus infection.
Sci Rep, 7, 2017
5LHD
DownloadVisualize
BU of 5lhd by Molmil
Structure of glycosylated human aminopeptidase N
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Recacha, R, Mudgal, G, Santiago, C, Casasnovas, J.M.
Deposit date:2016-07-11
Release date:2017-04-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Allosteric inhibition of aminopeptidase N functions related to tumor growth and virus infection.
Sci Rep, 7, 2017
3INB
DownloadVisualize
BU of 3inb by Molmil
Structure of the measles virus hemagglutinin bound to the CD46 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin glycoprotein, Membrane cofactor protein, ...
Authors:Santiago, C, Celma, M.L, Stehle, T, Casasnovas, J.M.
Deposit date:2009-08-12
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the measles virus hemagglutinin bound to the CD46 receptor
Nat.Struct.Mol.Biol., 17, 2010
3KAA
DownloadVisualize
BU of 3kaa by Molmil
Structure of Tim-3 in complex with phosphatidylserine
Descriptor: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, CALCIUM ION, Hepatitis A virus cellular receptor 2
Authors:Ballesteros, A, Santiago, C, Casasnovas, J.M.
Deposit date:2009-10-19
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:T cell/transmembrane, Ig, and mucin-3 allelic variants differentially recognize phosphatidylserine and mediate phagocytosis of apoptotic cells.
J.Immunol., 184, 2010
4OI9
DownloadVisualize
BU of 4oi9 by Molmil
Crystal Structure of ICAM-5 D1-D4 ectodomain fragment, Space Group P21
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Recacha, R, Jimenez, D, Tian, L, Barredo, R, Ghamberg, C, Casasnovas, J.M.
Deposit date:2014-01-19
Release date:2014-07-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of an ICAM-5 ectodomain fragment show electrostatic-based homophilic adhesions.
Acta Crystallogr.,Sect.D, 70, 2014
4OIA
DownloadVisualize
BU of 4oia by Molmil
Crystal Structure of ICAM-5 D1-D4 ectodomain fragment, Space Group P4322
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Recacha, R, Jimenez, D, Tian, L, Barredo, R, Ghamberg, C, Casasnovas, J.M.
Deposit date:2014-01-19
Release date:2014-07-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structures of an ICAM-5 ectodomain fragment show electrostatic-based homophilic adhesions.
Acta Crystallogr.,Sect.D, 70, 2014
4OIB
DownloadVisualize
BU of 4oib by Molmil
Crystal Structure of ICAM-5 D1-D4 ectodomain fragment, Space Group R3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Intercellular adhesion molecule 5, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Recacha, R, Jimenez, D, Tian, L, Barredo, R, Ghamberg, C, Casasnovas, J.M.
Deposit date:2014-01-19
Release date:2014-07-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:Crystal structures of an ICAM-5 ectodomain fragment show electrostatic-based homophilic adhesions.
Acta Crystallogr.,Sect.D, 70, 2014
3O74
DownloadVisualize
BU of 3o74 by Molmil
Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida
Descriptor: Fructose transport system repressor FruR, GLYCEROL
Authors:Chavarria, M, Santiago, C, Platero, R, Krell, T, Casasnovas, J.M, de Lorenzo, V.
Deposit date:2010-07-30
Release date:2011-01-12
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
J.Biol.Chem., 286, 2011
3O8E
DownloadVisualize
BU of 3o8e by Molmil
Structure of extracelllar portion of CD46 in complex with Adenovirus type 11 knob
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DITHIANE DIOL, Fiber 36.1 kDa protein, ...
Authors:Persson, B.D, Schmitz, N.B, Casasnovas, J.M, Stehle, T.
Deposit date:2010-08-03
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structure of the extracellular portion of CD46 provides insights into its interactions with complement proteins and pathogens.
Plos Pathog., 6, 2010
3O75
DownloadVisualize
BU of 3o75 by Molmil
Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida in complex with fructose 1-phosphate'
Descriptor: 1-O-phosphono-beta-D-fructofuranose, Fructose transport system repressor FruR
Authors:Chavarria, M, Santiago, C, Platero, R, Krell, T, Casasnovas, J.M, de Lorenzo, V.
Deposit date:2010-07-30
Release date:2011-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida
J.Biol.Chem., 286, 2011
2OR8
DownloadVisualize
BU of 2or8 by Molmil
Tim-1
Descriptor: ACETATE ION, Hepatitis A virus cellular receptor 1 homolog
Authors:Santiago, C, Ballesteros, A, Kaplan, G.G, Casasnovas, J.M.
Deposit date:2007-02-02
Release date:2007-04-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of T Cell Immunoglobulin Mucin Receptors 1 and 2 Reveal Mechanisms for Regulation of Immune Responses by the TIM Receptor Family.
Immunity, 26, 2007
2OR7
DownloadVisualize
BU of 2or7 by Molmil
Tim-2
Descriptor: ACETATE ION, T-cell immunoglobulin and mucin domain-containing protein 2
Authors:Santiago, C, Ballesteros, A, Kaplan, G.G, Casasnovas, J.M.
Deposit date:2007-02-02
Release date:2007-04-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of T Cell Immunoglobulin Mucin Receptors 1 and 2 Reveal Mechanisms for Regulation of Immune Responses by the TIM Receptor Family.
Immunity, 26, 2007
3BIA
DownloadVisualize
BU of 3bia by Molmil
Tim-4 in complex with sodium potassium tartrate
Descriptor: L(+)-TARTARIC ACID, SODIUM ION, T-cell immunoglobulin and mucin domain-containing protein 4
Authors:Santiago, C, Ballesteros, A, Kaplan, G.G, Freeman, G.J, Casasnovas, J.M.
Deposit date:2007-11-30
Release date:2008-01-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of T Cell Immunoglobulin Mucin Protein 4 Show a Metal-Ion-Dependent Ligand Binding Site where Phosphatidylserine Binds.
Immunity, 27, 2007
3BI9
DownloadVisualize
BU of 3bi9 by Molmil
Tim-4
Descriptor: ACETATE ION, T-cell immunoglobulin and mucin domain-containing protein 4
Authors:Santiago, C, Ballesteros, A, Kaplan, G.G, Freeman, G.J, Casasnovas, J.M.
Deposit date:2007-11-30
Release date:2008-01-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structures of T Cell Immunoglobulin Mucin Protein 4 Show a Metal-Ion-Dependent Ligand Binding Site where Phosphatidylserine Binds.
Immunity, 27, 2007
3BIB
DownloadVisualize
BU of 3bib by Molmil
Tim-4 in complex with phosphatidylserine
Descriptor: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, SODIUM ION, T-cell immunoglobulin and mucin domain-containing protein 4
Authors:Santiago, C, Ballesteros, A, Kaplan, G.G, Freeman, G.J, Casasnovas, J.M.
Deposit date:2007-11-30
Release date:2008-01-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of T Cell Immunoglobulin Mucin Protein 4 Show a Metal-Ion-Dependent Ligand Binding Site where Phosphatidylserine Binds.
Immunity, 27, 2007
1CKL
DownloadVisualize
BU of 1ckl by Molmil
N-TERMINAL TWO DOMAINS OF HUMAN CD46 (MEMBRANE COFACTOR PROTEIN, MCP)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Casasnovas, J, Larvie, M, Stehle, T.
Deposit date:1999-04-22
Release date:1999-06-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of two CD46 domains reveals an extended measles virus-binding surface.
EMBO J., 18, 1999

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon