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3SHD
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BU of 3shd by Molmil
Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1
Descriptor: MANGANESE (II) ION, Phosphatase nudJ, SULFATE ION
Authors:Hong, M.K, Kim, J.K, Kang, L.W.
Deposit date:2011-06-16
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
To be Published
3DKU
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BU of 3dku by Molmil
Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1
Descriptor: Putative phosphohydrolase
Authors:Hong, M.K, Kim, J.K, Jung, J.H, Jung, J.W, Choi, J.Y, Kang, L.W.
Deposit date:2008-06-26
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1.
To be Published
4NFX
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BU of 4nfx by Molmil
Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Descriptor: Putative Nudix hydrolase ymfB
Authors:Hong, M.K, Kim, J.K, Kang, L.W.
Deposit date:2013-11-01
Release date:2014-05-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Acta Crystallogr.,Sect.D, 70, 2014
4NFW
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BU of 4nfw by Molmil
Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Descriptor: MANGANESE (II) ION, Putative Nudix hydrolase ymfB, SULFATE ION
Authors:Hong, M.K, Kim, J.K, Kang, L.W.
Deposit date:2013-11-01
Release date:2014-05-14
Last modified:2015-03-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Acta Crystallogr.,Sect.D, 70, 2014
4REH
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BU of 4reh by Molmil
Crystal structure of ginseng major latex-like protein 151 (GLP) from Panax ginseng. (crystal-1)
Descriptor: Major latex-like protein
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-09-23
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of ginseng major latex-like protein 151 and its proposed lysophosphatidic acid-binding mechanism.
Acta Crystallogr.,Sect.D, 71, 2015
4REJ
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BU of 4rej by Molmil
Crystal structure of ginseng major latex-like protein 151 (GLP) from Panax ginseng. (crystal-3)
Descriptor: Major latex-like protein
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-09-23
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure of ginseng major latex-like protein 151 and its proposed lysophosphatidic acid-binding mechanism.
Acta Crystallogr.,Sect.D, 71, 2015
4REI
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BU of 4rei by Molmil
Crystal structure of ginseng major latex-like protein 151 (GLP) from Panax ginseng. (crystal-2)
Descriptor: (3R,5R)-3-ethyl-2,5-dimethylheptane, Major latex-like protein
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-09-23
Release date:2015-05-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure of ginseng major latex-like protein 151 and its proposed lysophosphatidic acid-binding mechanism.
Acta Crystallogr.,Sect.D, 71, 2015
6J4N
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BU of 6j4n by Molmil
Structure of papua new guinea MBL-1(PNGM-1) native
Descriptor: Metallo-beta-lactamases PNGM-1, ZINC ION
Authors:Hong, M.K, Park, K.S, Jeon, J.H, Lee, J.H, Park, Y.S, Lee, S.H, Kang, L.W.
Deposit date:2019-01-10
Release date:2019-02-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The novel metallo-beta-lactamase PNGM-1 from a deep-sea sediment metagenome: crystallization and X-ray crystallographic analysis.
Acta Crystallogr F Struct Biol Commun, 74, 2018
4QD4
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BU of 4qd4 by Molmil
Structure of ADC-68, a Novel Carbapenem-Hydrolyzing Class C Extended-Spectrum -Lactamase from Acinetobacter baumannii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-lactamase ADC-68, CITRIC ACID
Authors:Hong, M.K, Kang, L.W.
Deposit date:2014-05-13
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of ADC-68, a novel carbapenem-hydrolyzing class C extended-spectrum beta-lactamase isolated from Acinetobacter baumannii
Acta Crystallogr.,Sect.D, 70, 2014
4FXB
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BU of 4fxb by Molmil
Crystal structure of CYP105N1 from Streptomyces coelicolor: a cytochrome P450 oxidase in the coelibactin siderophore biosynthetic pathway
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450
Authors:Hong, M.K, Lim, Y.R, Kim, J.K, Kim, D.H, Kang, L.W.
Deposit date:2012-07-03
Release date:2012-11-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of cytochrome P450 CYP105N1 from Streptomyces coelicolor, an oxidase in the coelibactin siderophore biosynthetic pathway
Arch.Biochem.Biophys., 528, 2012
5D8D
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BU of 5d8d by Molmil
Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii
Descriptor: D-alanine--D-alanine ligase
Authors:Huynh, K.H, Hong, M.K, Kang, L.W.
Deposit date:2015-08-17
Release date:2016-08-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015
5DMX
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BU of 5dmx by Molmil
Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii, space group p212121
Descriptor: D-alanine--D-alanine ligase
Authors:Huynh, K.H, Hong, M.K, Kang, L.W.
Deposit date:2015-09-09
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015
5BPF
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BU of 5bpf by Molmil
Crystal structure of ADP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, ...
Authors:Tran, H.T, Kang, L.W, Hong, M.K.
Deposit date:2015-05-28
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5BPH
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BU of 5bph by Molmil
Crystal structure of AMP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, D-alanine--D-alanine ligase, ...
Authors:Tran, H.T, Kang, L.W, Hong, M.K.
Deposit date:2015-05-28
Release date:2016-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5C1O
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BU of 5c1o by Molmil
Crystal structure of AMP-PNP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
Descriptor: D-alanine--D-alanine ligase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Tran, H.T, Kang, L.W, Hong, M.K.
Deposit date:2015-06-15
Release date:2016-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5C1P
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BU of 5c1p by Molmil
Crystal structure of ADP and D-alanyl-D-alanine complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, ...
Authors:Tran, H.T, Kang, L.W, Hong, M.K, Ngo, H.P.T.
Deposit date:2015-06-15
Release date:2016-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
6JKW
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BU of 6jkw by Molmil
Seleno-methionine PNGM-1 from deep-sea sediment metagenome
Descriptor: Metallo-beta-lactamases PNGM-1, ZINC ION
Authors:Hong, M.K, Park, K.S, Jeon, J.H, Lee, J.H, Park, Y.S, Lee, S.H, Kang, L.W.
Deposit date:2019-03-02
Release date:2019-04-17
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:PNGM 1 a novel subclass B3 metallo beta lactamase from a deep sea sediment metagenome
Journal of Global Antimicrobial Resistance, 14, 2018
3UU0
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BU of 3uu0 by Molmil
Crystal structure of L-rhamnose isomerase from Bacillus halodurans in complex with Mn
Descriptor: L-rhamnose isomerase, MANGANESE (II) ION
Authors:Doan, T.T.N, Prabhu, P, Kim, J.K, Jeya, M, Kang, L.W, Lee, J.K.
Deposit date:2011-11-27
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based studies on the metal binding of two-metal-dependent sugar isomerases.
Febs J., 281, 2014
3UVA
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BU of 3uva by Molmil
Crystal structure of L-rhamnose isomerase mutant W38F from Bacillus halodurans in complex with Mn
Descriptor: L-Rhamnose isomerase, MANGANESE (II) ION
Authors:Doan, T.T.N, Prabhu, P, Jeya, M, Kim, J.K, Kang, L.W, Lee, J.K.
Deposit date:2011-11-29
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structure-based studies on the metal binding of two-metal-dependent sugar isomerases.
Febs J., 281, 2014
3UXI
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BU of 3uxi by Molmil
Crystal structure of L-rhamnose isomerase W38A mutant from Bacillus halodurans
Descriptor: L-Rhamnose isomerase, MANGANESE (II) ION
Authors:Doan, T.T.N, Prabhu, P, Kim, J.K, Jeya, M, Kang, L.W, Lee, J.K.
Deposit date:2011-12-05
Release date:2012-12-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structure-based studies on the metal binding of two-metal-dependent sugar isomerases.
Febs J., 281, 2014
4ZQI
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BU of 4zqi by Molmil
Crystal structure of Apo D-alanine-D-alanine ligase(DDL) from Yersinia pestis
Descriptor: D-alanine--D-alanine ligase, SODIUM ION
Authors:Tran, H.-T, Kang, L.-W, Hong, M.-K, Ngo, H.P.T, Huynh, K.H, Ahn, Y.J.
Deposit date:2015-05-10
Release date:2016-01-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
3P14
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BU of 3p14 by Molmil
Crystal structure of L-rhamnose isomerase with a novel high thermo-stability from Bacillus halodurans
Descriptor: L-rhamnose isomerase
Authors:Doan, T.T.N, Prabhu, P, Kang, L.W, Lee, J.K.
Deposit date:2010-09-30
Release date:2010-11-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure-based studies on the metal binding of two-metal-dependent sugar isomerases.
Febs J., 281, 2014
7BZ4
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BU of 7bz4 by Molmil
The mutant variant of PNGM-1. H279 was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-26
Release date:2021-04-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BYQ
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BU of 7byq by Molmil
The mutant variant of PNGM-1. H279A was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-24
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZ1
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BU of 7bz1 by Molmil
The mutant variant of PNGM-1. H96 was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-26
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020

 

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