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4UBP
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BU of 4ubp by Molmil
STRUCTURE OF BACILLUS PASTEURII UREASE INHIBITED WITH ACETOHYDROXAMIC ACID AT 1.55 A RESOLUTION
Descriptor: ACETOHYDROXAMIC ACID, NICKEL (II) ION, PROTEIN (UREASE (CHAIN A)), ...
Authors:Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
Deposit date:1999-02-25
Release date:2000-03-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The complex of Bacillus pasteurii urease with acetohydroxamate anion from X-ray data at 1.55 A resolution.
J.Biol.Inorg.Chem., 5, 2000
2UBP
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BU of 2ubp by Molmil
STRUCTURE OF NATIVE UREASE FROM BACILLUS PASTEURII
Descriptor: NICKEL (II) ION, PROTEIN (UREASE ALPHA SUBUNIT), PROTEIN (UREASE BETA SUBUNIT), ...
Authors:Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
Deposit date:1998-11-04
Release date:1999-11-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: why urea hydrolysis costs two nickels.
Structure Fold.Des., 7, 1999
1C75
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BU of 1c75 by Molmil
0.97 A "AB INITIO" CRYSTAL STRUCTURE OF CYTOCHROME C-553 FROM BACILLUS PASTEURII
Descriptor: CYTOCHROME C-553, HEME C
Authors:Benini, S, Ciurli, S, Rypniewski, W.R, Wilson, K.S.
Deposit date:2000-02-09
Release date:2000-03-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Crystal structure of oxidized Bacillus pasteurii cytochrome c553 at 0.97-A resolution.
Biochemistry, 39, 2000
1IE7
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BU of 1ie7 by Molmil
PHOSPHATE INHIBITED BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE
Descriptor: NICKEL (II) ION, PHOSPHATE ION, UREASE ALPHA SUBUNIT, ...
Authors:Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
Deposit date:2001-04-09
Release date:2001-04-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-based rationalization of urease inhibition by phosphate: novel insights into the enzyme mechanism.
J.Biol.Inorg.Chem., 6, 2001
1S3T
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BU of 1s3t by Molmil
BORATE INHIBITED BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE
Descriptor: BORIC ACID, NICKEL (II) ION, SULFATE ION, ...
Authors:Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
Deposit date:2004-01-14
Release date:2004-04-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular Details of Urease Inhibition by Boric Acid: Insights into the Catalytic Mechanism.
J.Am.Chem.Soc., 126, 2004
4CEX
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BU of 4cex by Molmil
1.59 A resolution Fluoride inhibited Sporosarcina pasteurii urease
Descriptor: 1,2-ETHANEDIOL, FLUORIDE ION, NICKEL (II) ION, ...
Authors:Benini, S, Cianci, M, Ciurli, S.
Deposit date:2013-11-12
Release date:2014-08-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.589 Å)
Cite:Fluoride Inhibition of Sporosarcina Pasteurii Urease: Structure and Thermodynamics.
J.Biol.Inorg.Chem., 19, 2014
4CEU
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BU of 4ceu by Molmil
1.58 A resolution native Sporosarcina pasteurii urease
Descriptor: 1,2-ETHANEDIOL, HYDROXIDE ION, NICKEL (II) ION, ...
Authors:Benini, S, Cianci, M, Ciurli, S.
Deposit date:2013-11-12
Release date:2014-08-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Fluoride Inhibition of Sporosarcina Pasteurii Urease: Structure and Thermodynamics.
J.Biol.Inorg.Chem., 19, 2014
1UBP
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BU of 1ubp by Molmil
CRYSTAL STRUCTURE OF UREASE FROM BACILLUS PASTEURII INHIBITED WITH BETA-MERCAPTOETHANOL AT 1.65 ANGSTROMS RESOLUTION
Descriptor: BETA-MERCAPTOETHANOL, NICKEL (II) ION, UREASE
Authors:Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S, Mangani, S.
Deposit date:1998-01-21
Release date:1999-03-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The complex of Bacillus pasteurii urease with beta-mercaptoethanol from X-ray data at 1.65-A resolution
J.Biol.Inorg.Chem., 3, 1998
4AC7
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BU of 4ac7 by Molmil
The crystal structure of Sporosarcina pasteurii urease in complex with citrate
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, HYDROXIDE ION, ...
Authors:Benini, S, Kosikowska, P, Cianci, M, Gonzalez Vara, A, Berlicki, L, Ciurli, S.
Deposit date:2011-12-14
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of Sporosarcina Pasteurii Urease in a Complex with Citrate Provides New Hints for Inhibitor Design.
J.Biol.Inorg.Chem., 18, 2013
3UBP
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BU of 3ubp by Molmil
DIAMIDOPHOSPHATE INHIBITED BACILLUS PASTEURII UREASE
Descriptor: DIAMIDOPHOSPHATE, NICKEL (II) ION, PROTEIN (UREASE ALPHA SUBUNIT), ...
Authors:Benini, S, Rypniewski, W.R, Wilson, K.S, Miletti, S, Mangani, S, Ciurli, S.
Deposit date:1998-12-16
Release date:1999-12-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: why urea hydrolysis costs two nickels.
Structure Fold.Des., 7, 1999
2J9B
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BU of 2j9b by Molmil
THE CRYSTAL STRUCTURE OF CYTOCHROME C' FROM RUBRIVIVAX GELATINOSUS AT 1.5 A RESOLUTION AND PH 6.3
Descriptor: CYTOCHROME C', HEME C
Authors:Benini, S, Ciurli, S, Rypniewski, W.R, Wilson, K.S.
Deposit date:2006-11-06
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High resolution crystal structure of Rubrivivax gelatinosus cytochrome c'.
J. Inorg. Biochem., 102, 2008
2Y3Y
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BU of 2y3y by Molmil
Holo-Ni(II) HpNikR is a symmetric tetramer containing four canonic square-planar Ni(II) ions at physiological pH
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, NICKEL (II) ION, ...
Authors:Benini, S, Cianci, M, Ciurli, S.
Deposit date:2011-01-04
Release date:2011-08-17
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Holo-Ni(2+)Helicobacter Pylori Nikr Contains Four Square-Planar Nickel-Binding Sites at Physiological Ph.
Dalton Trans, 40, 2011
2CMP
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BU of 2cmp by Molmil
crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6
Descriptor: TERMINASE SMALL SUBUNIT
Authors:Benini, S, Chechik, M, Ortiz-Lombardia, M, Polier, S, Shevtsov, M.B, DeLuchi, D, Alonso, J.C, Antson, A.A.
Deposit date:2006-05-11
Release date:2007-05-15
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The 1.58 A Resolution Structure of the DNA-Binding Domain of Bacteriophage Sf6 Small Terminase Provides New Hints on DNA Binding
Acta Crystallogr.,Sect.F, 69, 2013
1WCF
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BU of 1wcf by Molmil
1.54 A CRYSTAL STRUCTURE OF RV3628, MYCOBACTERIUM TUBERCULOSIS INORGANIC PYROPHOSPHATASE (PPASE) AT PH7.0
Descriptor: INORGANIC PYROPHOSPHATASE, PHOSPHATE ION, POTASSIUM ION
Authors:Benini, S, Wilson, K.S.
Deposit date:2004-11-13
Release date:2006-07-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of the Mycobacterium Tuberculosis Soluble Inorganic Pyrophosphatase Rv3628 at Ph 7.0.
Acta Crystallogr.,Sect.F, 67, 2011
2J8W
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BU of 2j8w by Molmil
The crystal structure of cytochrome c' from Rubrivivax gelatinosus at 1.3 A Resolution and pH 8.0
Descriptor: CYTOCHROME C', HEME C
Authors:Benini, S, Ciurli, S, Rypniewski, W.R, Wilson, K.S.
Deposit date:2006-10-30
Release date:2007-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:High resolution crystal structure of Rubrivivax gelatinosus cytochrome c'.
J. Inorg. Biochem., 102, 2008
1RFE
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BU of 1rfe by Molmil
Crystal structure of conserved hypothetical protein Rv2991 from Mycobacterium tuberculosis
Descriptor: hypothetical protein Rv2991
Authors:Benini, S, Haouz, A, Proux, F, Betton, J.M, Alzari, P, Dodson, G.G, Wilson, K.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-11-08
Release date:2004-12-28
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of Rv2991 from Mycobacterium tuberculosis: An F420binding protein with unknown function.
J. Struct. Biol., 2019
1SXV
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BU of 1sxv by Molmil
1.3A Crystal structure of rv3628, Mycobacterium tuberculosis inorganic pyrophosphatase (PPase) at pH5.0
Descriptor: GLYCEROL, Inorganic pyrophosphatase, SULFATE ION
Authors:Benini, S, Wilson, K.S.
Deposit date:2004-03-31
Release date:2005-04-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Mycobacterium tuberculosis Rv3628, yet another inorganic pyrophosphatase or a possible drug target?
To be Published
1B7V
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BU of 1b7v by Molmil
Structure of the C-553 cytochrome from Bacillus pasteruii to 1.7 A resolution
Descriptor: HEME C, PROTEIN (CYTOCHROME C-553)
Authors:Gonzalez, A, Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S.
Deposit date:1999-01-22
Release date:2000-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of oxidized Bacillus pasteurii cytochrome c553 at 0.97-A resolution.
Biochemistry, 39, 2000
4D48
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BU of 4d48 by Molmil
Crystal Structure of glucose-1-phosphate uridylyltransferase GalU from Erwinia amylovora.
Descriptor: GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
Authors:Toccafondi, M, Wuerges, J, Cianci, M, Benini, S.
Deposit date:2014-10-27
Release date:2016-01-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Glucose-1-phosphate uridylyltransferase from Erwinia amylovora: Activity, structure and substrate specificity.
Biochim. Biophys. Acta, 1865, 2017
4D74
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BU of 4d74 by Molmil
1.57 A crystal structure of erwinia amylovora tyrosine phosphatase amsI
Descriptor: PROTEIN-TYROSINE-PHOSPHATASE AMSI, SULFATE ION
Authors:Benini, S, Salomone-Stagni, M, Caputi, L, Cianci, M.
Deposit date:2014-11-19
Release date:2016-01-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Characterization and 1.57 A Resolution Structure of the Key Fire Blight Phosphatase Amsi from Erwinia Amylovora
Acta Crystallogr.,Sect.F, 72, 2016
6QDY
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BU of 6qdy by Molmil
The crystal structure of Sporosarcina pasteurii urease in complex with its substrate urea
Descriptor: 1,2-ETHANEDIOL, FLUORIDE ION, NICKEL (II) ION, ...
Authors:Mazzei, L, Cianci, M, Benini, S, Ciurli, S.
Deposit date:2019-01-03
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.416 Å)
Cite:The Structure of the Elusive Urease-Urea Complex Unveils the Mechanism of a Paradigmatic Nickel-Dependent Enzyme.
Angew.Chem.Int.Ed.Engl., 58, 2019
7OSO
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BU of 7oso by Molmil
The crystal structure of Erwinia tasmaniensis levansucrase in complex with (S)-1,2,4-butanentriol
Descriptor: (2~{S})-butane-1,2,4-triol, Levansucrase (Beta-D-fructofuranosyl transferase), ZINC ION
Authors:Polsinelli, I, Salomone-Stagni, M, Benini, S.
Deposit date:2021-06-09
Release date:2022-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Erwinia tasmaniensis levansucrase shows enantiomer selection for (S)-1,2,4-butanetriol.
Acta Crystallogr.,Sect.F, 78, 2022
5A6T
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BU of 5a6t by Molmil
1.65 A resolution Sulphite inhibited Sporosarcina pasteurii urease
Descriptor: 1,2-ETHANEDIOL, NICKEL (II) ION, SULFATE ION, ...
Authors:Mazzei, L, Cianci, M, Benini, S, Bertini, L, Musiani, F, Ciurli, S.
Deposit date:2015-07-01
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Kinetic and Structural Studies Reveal a Unique Binding Mode of Sulfite to the Nickel Center in Urease.
J.Inorg.Biochem., 154, 2015
1HLQ
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BU of 1hlq by Molmil
CRYSTAL STRUCTURE OF RHODOFERAX FERMENTANS HIGH POTENTIAL IRON-SULFUR PROTEIN REFINED TO 1.45 A
Descriptor: HIGH-POTENTIAL IRON-SULFUR PROTEIN, IRON/SULFUR CLUSTER, SULFATE ION
Authors:Gonzalez, A, Ciurli, S, Benini, S.
Deposit date:2000-12-01
Release date:2003-06-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of Rhodoferax fermentans high-potential iron-sulfur protein solved by MAD.
Acta Crystallogr.,Sect.D, 59, 2003
8C86
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BU of 8c86 by Molmil
Crystal structure of human transthyretin in complex with 3-O-methyltolcapone analogue 2
Descriptor: (2,4-dimethylphenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone, Transthyretin
Authors:Poonsiri, T, Benini, S, Loconte, V, Cianci, M.
Deposit date:2023-01-18
Release date:2024-01-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:3-O-Methyltolcapone and Its Lipophilic Analogues Are Potent Inhibitors of Transthyretin Amyloidogenesis with High Permeability and Low Toxicity.
Int J Mol Sci, 25, 2023

 

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