5HD1

Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome

This is a non-PDB format compatible entry.

Summary for 5HD1

• Entry DOI: 10.2210/pdb5hd1/pdb
• Related: 5HAU 5HCP 5HCQ 5HCR
• Descriptor: 23S Ribosomal RNA, 50S ribosomal protein L14, 50S ribosomal protein L15, ... (59 entities in total)
• Functional Keywords: pyrrhocoricin, antimicrobial peptide, antibiotic, 70s ribosome, inhibition of translation, peptidyl transferase inhibitors, 50s ribosomal subunit, peptide exit tunnel, ribosome-antibiotic complex, ribosome/antibiotic
• Biological source: Escherichia coli; More
• Total number of polymer chains: 110
• Total formula weight: 4470889.37

Authors

Gagnon, M.G.,Roy, R.N.,Lomakin, I.B.,Florin, T.,Mankin, A.S.,Steitz, T.A. (deposition date: 2016-01-04, release date: 2016-04-06, Last modification date: 2024-03-06)

• Primary citation: Gagnon, M.G.,Roy, R.N.,Lomakin, I.B.,Florin, T.,Mankin, A.S.,Steitz, T.A.; Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.; Nucleic Acids Res., 44:2439-2450, 2016; PubMed: 26809677; DOI: 10.1093/nar/gkw018

Experimental method

X-RAY DIFFRACTION (2.7 Å)