SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborDownloads>

4C5X

Ultra High Resolution Dickerson-Drew dodecamer B-DNA with 5-Hydroxymethylcystosine Modification

Summary for 4C5X

Related4C63 4C64 
Descriptor5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5HC)P*GP*CP*G)-3'
Functional KeywordsDNA, CYTOSINE MODIFICATION,DNA
Biological sourceSYNTHETIC CONSTRUCT
Total number of polymer chains2
Total molecular weight7411.2
Authors
McDonough, M.,El-Sagheer, A.H.,Brown, T.,Schofield, C.J. (deposition date: 2013-09-16, release date: 2013-10-02, modification date: 2014-02-12)
Primary citation
Lercher, L.,Mcdonough, M.A.,El-Sagheer, A.H.,Thalhammer, A.,Kriaucionis, S.,Brown, T.,Schofield, C.J.
Structural Insights Into How 5-Hydroxymethylation Influences Transcription Factor Binding.
Chem.Commun.(Camb.), 50:1794-, 2014
PubMed: 24287551
DOI: 10.1039/C3CC48151D
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.3 Å)
?

Structure validation

RfreeClashscoreRSRZ outliers0.16500MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolutionDownload full validation report

More Asymmetric unit images

no rotation
rotated about x axis by 90°
rotated about y axis by 90°
Copyright © 2013-2014 Protein Data Bank Japan
  • Everything
  • PDBID/Keywords
  • Author
  • Chemie
  • Sequence
  • ?
104537
entries available on 2014-10-29
00:00 UTC / 09:00 JST