2M11

Structure of perimidinone-derived synthetic nucleoside paired with guanine in DNA duplex

Summary for 2M11

• Entry DOI: 10.2210/pdb2m11/pdb
• Related: 4HQI
• NMR Information: BMRB: 18835
• Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(D3N)P*GP*CP*G)-3') (1 entity in total)
• Functional Keywords: b-form dna, dper, perimidinone-derived nucleoside, dickerson-drew dodecamer, dna
• Total number of polymer chains: 2
• Total formula weight: 7472.97

Authors

Kowal, E.A.,Lad, R.,Pallan, P.S.,Muffly, E.,Wawrzak, Z.,Egli, M.,Sturla, S.J.,Stone, M.P. (deposition date: 2012-11-09, release date: 2013-06-12, Last modification date: 2013-09-11)

• Primary citation: Kowal, E.A.,Lad, R.R.,Pallan, P.S.,Dhummakupt, E.,Wawrzak, Z.,Egli, M.,Sturla, S.J.,Stone, M.P.; Recognition of O6-benzyl-2'-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction.; Nucleic Acids Res., 41:7566-7576, 2013; PubMed: 23748954; DOI: 10.1093/nar/gkt488

Experimental method

SOLUTION NMR