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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

4V9N

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AA, CA16S rRNA (1504-MER)polymer1504488431.22GenBank (AE017221.1)Thermus thermophilus
2AV, CVmessenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')polymer103217.02Thermus thermophilus
3AW, CWP-site tRNA-fMetpolymer7724802.82GenBank (CP001509.3)Thermus thermophilus
4AY, CYBacterial peptide chain release factor 2 (RF-2)polymer36240889.22UniProt (Q72GJ6)
Pfam (PF03462)
Pfam (PF00472)
In PDB		Thermus thermophilus
5AB, CB30S ribosomal protein S2polymer23426987.32UniProt (P62662)
Pfam (PF00318)
In PDB		Thermus thermophilus
6AC, CC30S ribosomal protein S3polymer20622862.42UniProt (P62663)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Thermus thermophilus
7AD, CD30S ribosomal protein S4polymer20824242.32UniProt (P62664)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Thermus thermophilus
8AE, CE30S ribosomal protein S5polymer15116460.22UniProt (P62665)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Thermus thermophilus
9AF, CF30S ribosomal protein S6polymer10111988.82UniProt (P62666)
Pfam (PF01250)
In PDB		Thermus thermophilus
10AG, CG30S ribosomal protein S7polymer15517919.82UniProt (P62667)
Pfam (PF00177)
In PDB		Thermus thermophilus
11AH, CH30S ribosomal protein S8polymer13815868.62UniProt (P62668)
Pfam (PF00410)
In PDB		Thermus thermophilus
12AI, CI30S ribosomal protein S9polymer12714298.52UniProt (P62669)
Pfam (PF00380)
In PDB		Thermus thermophilus
13AJ, CJ30S ribosomal protein S10polymer9811299.22UniProt (P62653)
Pfam (PF00338)
In PDB		Thermus thermophilus
14AK, CK30S ribosomal protein S11polymer11412014.72UniProt (P62654)
Pfam (PF00411)
In PDB		Thermus thermophilus
15AL, CL30S ribosomal protein S12polymer12213604.12UniProt (P61941)
Pfam (PF00164)
In PDB		Thermus thermophilus
16AM, CM30S ribosomal protein S13polymer11713308.52UniProt (P62655)
Pfam (PF00416)
In PDB		Thermus thermophilus
17AN, CN30S ribosomal protein S14polymer607027.52UniProt (P62656)
Pfam (PF00253)
In PDB		Thermus thermophilus
18AO, CO30S ribosomal protein S15polymer8810447.22UniProt (P62657)
Pfam (PF00312)
In PDB		Thermus thermophilus
19AP, CP30S ribosomal protein S16polymer839924.52UniProt (P62238)
Pfam (PF00886)
In PDB		Thermus thermophilus
20AQ, CQ30S ribosomal protein S17polymer9911721.92UniProt (P62658)
Pfam (PF00366)
In PDB		Thermus thermophilus
21AR, CR30S ribosomal protein S18polymer708155.82UniProt (P62659)
Pfam (PF01084)
In PDB		Thermus thermophilus
22AS, CS30S ribosomal protein S19polymer788949.42UniProt (P62660)
Pfam (PF00203)
In PDB		Thermus thermophilus
23AT, CT30S ribosomal protein S20polymer9910907.12UniProt (P62661)
Pfam (PF01649)
In PDB		Thermus thermophilus
24AU, CU30S ribosomal protein Thxpolymer242960.52UniProt (P62613)
Pfam (PF17070)
In PDB		Thermus thermophilus
25BA, DA23S ribosomal RNApolymer2879936302.12GenBank (AE017221.1)Thermus thermophilus
26BB, DB5S ribosomal RNApolymer11938553.02GenBank (AE017221.1)Thermus thermophilus
27BD, DD50S ribosomal protein L2polymer27129828.62UniProt (Q72I07)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Thermus thermophilus
28BE, DE50S ribosomal protein L3polymer20422250.02UniProt (Q72I04)
Pfam (PF00297)
In PDB		Thermus thermophilus
29BF, DF50S ribosomal protein L4polymer20222487.02UniProt (Q72I05)
Pfam (PF00573)
In PDB		Thermus thermophilus
30BG, DG50S ribosomal protein L5polymer18120944.42UniProt (Q72I16)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Thermus thermophilus
31BH, DH50S ribosomal protein L6polymer15917363.12UniProt (Q72I19)
Pfam (PF00347)
In PDB		Thermus thermophilus
32BI, DI50S ribosomal protein L9polymer14516107.92UniProt (Q72GV5)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Thermus thermophilus
33BK, DK50S ribosomal protein L11polymer14715526.12UniProt (P62442)
Pfam (PF00298)
Pfam (PF03946)
In PDB		Thermus thermophilus
34BN, DN50S ribosomal protein L13polymer13715568.52UniProt (Q72IN1)
Pfam (PF00572)
In PDB		Thermus thermophilus
35BO, DO50S ribosomal protein L14polymer12213309.62UniProt (Q72I14)
Pfam (PF00238)
In PDB		Thermus thermophilus
36BP, DP50S ribosomal protein L15polymer14615858.52UniProt (Q72I23)
Pfam (PF00828)
In PDB		Thermus thermophilus
37BQ, DQ50S ribosomal protein L16polymer13415148.82UniProt (Q72I11)
Pfam (PF00252)
In PDB		Thermus thermophilus
38BR, DR50S ribosomal protein L17polymer11713619.02UniProt (Q72I33)
Pfam (PF01196)
In PDB		Thermus thermophilus
39BS, DS50S ribosomal protein L18polymer9810941.92UniProt (Q72I20)
Pfam (PF00861)
In PDB		Thermus thermophilus
40BT, DT50S ribosomal protein L19polymer13716247.92UniProt (Q72JU9)
Pfam (PF01245)
In PDB		Thermus thermophilus
41BU, DU50S ribosomal protein L20polymer11713648.12UniProt (Q72L76)
Pfam (PF00453)
In PDB		Thermus thermophilus
42BV, DV50S ribosomal protein L21polymer10111069.22UniProt (Q72HR2)
Pfam (PF00829)
In PDB		Thermus thermophilus
43BW, DW50S ribosomal protein L22polymer11212678.92UniProt (Q72I09)
Pfam (PF00237)
In PDB		Thermus thermophilus
44BX, DX50S ribosomal protein L23polymer9210273.12UniProt (Q72I06)
Pfam (PF00276)
In PDB		Thermus thermophilus
45BY, DY50S ribosomal protein L24polymer10011078.52UniProt (Q72I15)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Thermus thermophilus
46BZ, DZ50S ribosomal protein L25polymer18721021.12UniProt (Q72IA7)
Pfam (PF14693)
Pfam (PF01386)
In PDB		Thermus thermophilus
47B0, D050S ribosomal protein L27polymer768587.92UniProt (Q72HR3)
Pfam (PF01016)
In PDB		Thermus thermophilus
48B1, D150S ribosomal protein L28polymer889884.72UniProt (Q72G84)
Pfam (PF00830)
In PDB		Thermus thermophilus
49B2, D250S ribosomal protein L29polymer627457.92UniProt (Q72I12)
Pfam (PF00831)
In PDB		Thermus thermophilus
50B3, D350S ribosomal protein L30polymer596670.02UniProt (Q72I22)
Pfam (PF00327)
In PDB		Thermus thermophilus
51B4, D450S ribosomal protein L31polymer303278.92UniProt (Q72JR0)
Pfam (PF01197)
In PDB		Thermus thermophilus
52B5, D550S ribosomal protein L32polymer525818.92UniProt (P62652)
Pfam (PF01783)
In PDB		Thermus thermophilus
53B6, D650S ribosomal protein L33polymer445473.42UniProt (Q72GW3)
Pfam (PF00471)
In PDB		Thermus thermophilus
54B7, D750S ribosomal protein L34polymer485975.32UniProt (P80340)
Pfam (PF00468)
In PDB		Thermus thermophilus
55B8, D850S ribosomal protein L35polymer637245.92UniProt (Q72L77)
Pfam (PF01632)
In PDB		Thermus thermophilus
56BA, BB, DA, CA, AA...MAGNESIUM IONnon-polymer24.32410Chemie (MG)
57CD, CN, AD, ANZINC IONnon-polymer65.44Chemie (ZN)
Sequence modifications
AY, CY: 17 - 378 (UniProt: Q72GJ6)
PDBExternal DatabaseDetails
Pro 253Gln 253engineered mutation
BA, DA: 6 - 2897 (GenBank: AE017221.1)
PDBExternal DatabaseDetails
C 276A 1534789conflict
A 277C 1534790conflict
U 1141C 1535654conflict
U 2825G 1537301conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains110
Total formula weight4377013.0
Non-Polymers*Number of molecules2414
Total formula weight58836.7
All*Total formula weight4435849.7
*Water molecules are not included.

218500

PDB entries from 2024-04-17

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