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1J75
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1j75
CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN ZALPHA OF DLM-1 BOUND TO Z-DNA
Descriptor:DLM-1/Z-DNA Complex
Authors:Schwartz, T., Behlke, J., Lowenhaupt, K., Heinemann, U., Rich, A.
Deposit date:2001-05-15
Release date:2001-09-01
Modification date:2011-11-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the DLM-1-Z-DNA complex reveals a conserved family of Z-DNA-binding proteins.
Nat.Struct.Biol., 8, 2001
1SFU
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1sfu
CRYSTAL STRUCTURE OF THE VIRAL ZALPHA DOMAIN BOUND TO LEFT-HANDED Z-DNA
Descriptor:34L PROTEIN/DNA Complex
Authors:Ha, S.C., Van Quyen, D., Wu, C.A., Lowenhaupt, K., Rich, A., Kim, Y.G., Kim, K.K.
Deposit date:2004-02-20
Release date:2004-08-17
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.
Proc.Natl.Acad.Sci.USA, 101, 2004
1XMK
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1xmk
THE CRYSTAL STRUCTURE OF THE ZB DOMAIN FROM THE RNA EDITING ENZYME ADAR1
Descriptor:Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.-)
Authors:Athanasiadis, A., Placido, D., Maas, S., Brown II, B.A., Lowenhaupt, K., Rich, A.
Deposit date:2004-10-03
Release date:2005-08-02
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:The Crystal Structure of the Z[beta] Domain of the RNA-editing Enzyme ADAR1 Reveals Distinct Conserved Surfaces Among Z-domains.
J.Mol.Biol., 351, 2005
2HEO
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2heo
GENERAL STRUCTURE-BASED APPROACH TO THE DESIGN OF PROTEIN LIGANDS: APPLICATION TO THE DESIGN OF KV1.2 POTASSIUM CHANNEL BLOCKERS.
Descriptor:Z-DNA binding protein 1/DNA Complex
Authors:Magis, C., Gasparini, S., Charbonnier, J.B., Stura, E., Le Du, M.H., Menez, A., Cuniasse, P.
Deposit date:2006-06-21
Release date:2006-11-21
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based secondary structure-independent approach to design protein ligands: Application to the design of Kv1.2 potassium channel blockers.
J.Am.Chem.Soc., 128, 2006
2L4M
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2l4m
SOLUTION STRUCTURE OF THE ZBETA DOMAIN OF HUMAN DAI AND ITS BINDING MODES TO B- AND Z-DNA
Descriptor:Uncharacterized protein
Authors:Kim, K., Khayrutdinov, B.I., Jeon, Y.H., Kim, K.K.
Deposit date:2010-10-08
Release date:2011-04-13
Method:SOLUTION NMR
Cite:Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA
Proc.Natl.Acad.Sci.USA, 2011
2L54
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2l54
SOLUTION STRUCTURE OF THE ZALPHA DOMAIN MUTANT OF ADAR1 (N43A,Y47A)
Descriptor:Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.- )
Authors:Zhao, J., Pervushin, K., Feng, S., Droge, P.
Deposit date:2010-10-24
Release date:2011-01-12
Modification date:2011-02-23
Method:SOLUTION NMR
Cite:Alternate rRNA secondary structures as regulators of translation
Nat.Struct.Mol.Biol., 18, 2011
2LNB
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2lnb
SOLUTION NMR STRUCTURE OF N-TERMINAL DOMAIN (6-74) OF HUMAN ZBP1 PROTEIN, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR8174A.
Descriptor:Z-DNA-binding protein 1
Authors:Yang, Y., Ramelot, T.A., Hamilton, K., Kohan, E., Wang, D., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-12-20
Release date:2012-01-18
Method:SOLUTION NMR
Cite:Solution NMR structure of N-terminal domain (6-74) of human ZBP1 protein, Northeast Structural Genomics Consortium Target HR8174A
To be Published
3EYI
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3eyi
THE CRYSTAL STRUCTURE OF THE SECOND Z-DNA BINDING DOMAIN OF HUMAN DAI (ZBP1) IN COMPLEX WITH Z-DNA
Descriptor:Z-DNA-binding protein 1/Z-DNA complex
Authors:Ha, S.C., Kim, K.K.
Deposit date:2008-10-21
Release date:2009-01-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA reveals an unusual binding mode to Z-DNA.
Proc.Natl.Acad.Sci.USA, 105, 2008
4HOB
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4hob
THE CRYSTAL STRUCTURE OF THE ZALPHA DOMAIN FROM CYPRINID HERPES VIRUS 3
Descriptor:Putative uncharacterized protein
Authors:Tome, A.R., Kus, K., Rosa, M., Paulo, L., Figueiredo, D., Athanasiadis, A.
Deposit date:2012-10-22
Release date:2013-09-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a poxvirus-like zalpha domain from cyprinid herpesvirus 3
J.Virol., 87, 2013
4KA4
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4ka4
CRYSTAL STRUCTURE OF A PROTEOLYTICALLY DEFINED ZBETA DOMAIN OF HUMAN DAI (ZBP1, DLM-1)
Descriptor:Z-DNA-binding protein 1/DNA
Authors:Athanasiadis, A., de Rosa, M., De Sanctis, D.
Deposit date:2013-04-22
Release date:2013-05-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a proteolytically defined Zbeta domain of human DAI (ZBP1, DLM-1)
To be Published
4KMF
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4kmf
CRYSTAL STRUCTURE OF ZALPHA DOMAIN FROM CARASSIUS AURATUS PKZ IN COMPLEX WITH Z-DNA
Descriptor:Interferon-inducible and double-stranded-dependent eIF-2kinase/DNA complex
Authors:Kim, D., Kim, K.K.
Deposit date:2013-05-08
Release date:2013-07-03
Modification date:2014-06-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Distinct Z-DNA binding mode of a PKR-like protein kinase containing a Z-DNA binding domain (PKZ).
Nucleic Acids Res., 42, 2014
1OYI
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1oyi
SOLUTION STRUCTURE OF THE Z-DNA BINDING DOMAIN OF THE VACCINIA VIRUS GENE E3L
Descriptor:Protein E3
Authors:Kahmann, J.D., Wecking, D.A., Putter, V., Lowenhaupt, K., Kim, Y.-G., Schmieder, P., Oschkinat, H., Rich, A., Schade, M.
Deposit date:2003-04-04
Release date:2004-03-09
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:The solution structure of the N-terminal domain of E3L shows a tyrosine conformation that may explain its reduced affinity to Z-DNA in vitro.
Proc.Natl.Acad.Sci.USA, 101, 2004
1QBJ
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1qbj
CRYSTAL STRUCTURE OF THE ZALPHA Z-DNA COMPLEX
Descriptor:DOUBLE-STRANDED RNA SPECIFIC ADENOSINE DEAMINASE (ADAR1)/DNA COMPLEX
Authors:Schwartz, T., Rould, M.A., Rich, A.
Deposit date:1999-04-22
Release date:1999-07-02
Modification date:2011-11-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Zalpha domain of the human editing enzyme ADAR1 bound to left-handed Z-DNA.
Science, 284, 1999
1QGP
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1qgp
NMR STRUCTURE OF THE Z-ALPHA DOMAIN OF ADAR1, 15 STRUCTURES
Descriptor:ADENOSINE DEAMINASE ADAR1
Authors:Schade, M., Turner, C.J., Kuehne, R., Schmieder, P., Lowenhaupt, K., Herbert, A., Rich, A., Oschkinat, H.
Deposit date:1999-05-03
Release date:1999-10-19
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:The solution structure of the Zalpha domain of the human RNA editing enzyme ADAR1 reveals a prepositioned binding surface for Z-DNA.
Proc.Natl.Acad.Sci.USA, 96, 1999
2ACJ
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2acj
CRYSTAL STRUCTURE OF THE B/Z JUNCTION CONTAINING DNA BOUND TO Z-DNA BINDING PROTEINS
Descriptor:DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE(E.C.3.5.4.-)/DNA complex
Authors:Ha, S.C., Lowenhaupt, K., Rich, A., Kim, Y.-G., Kim, K.K.
Deposit date:2005-07-19
Release date:2005-10-25
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
Nature, 437, 2005
2GXB
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2gxb
CRYSTAL STRUCTURE OF THE ZA DOMAIN BOUND TO Z-RNA
Descriptor:Double-stranded RNA-specific adenosine deaminase/RNA Complex
Authors:Athanasiadis, A., Placido, D., Rich, A.
Deposit date:2006-05-08
Release date:2007-05-01
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A Left-Handed RNA Double Helix Bound by the Zalpha Domain of the RNA-Editing Enzyme ADAR1.
Structure, 15, 2007
3F21
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3f21
CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CACGTG)
Descriptor:Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.-)/DNA Complex
Authors:Ha, S.C., Choi, J., Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Modification date:2009-02-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3F22
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3f22
CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CGTACG)
Descriptor:Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.-)/DNA Complex
Authors:Ha, S.C., Choi, J., Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Modification date:2009-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3F23
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3f23
CRYSTAL STRUCTURE OF ZALPHA IN COMPLEX WITH D(CGGCCG)
Descriptor:Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.-)/DNA Complex
Authors:Ha, S.C., Choi, J., Kim, K.K.
Deposit date:2008-10-28
Release date:2008-12-30
Modification date:2009-02-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1
Nucleic Acids Res., 37, 2009
3IRQ
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3irq
CRYSTAL STRUCTURE OF A Z-Z JUNCTION
Descriptor:Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.-)
Authors:Athanasiadis, A., de Rosa, M.
Deposit date:2009-08-24
Release date:2010-05-19
Modification date:2010-06-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IRR
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3irr
CRYSTAL STRUCTURE OF A Z-Z JUNCTION (WITH HEPES INTERCALATING)
Descriptor:Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.-)/DNA complex
Authors:Athanasiadis, A., de Rosa, M.
Deposit date:2009-08-24
Release date:2010-05-19
Modification date:2010-06-02
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of a junction between two Z-DNA helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
4LB5
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4lb5
CRYSTAL STRUCTURE OF PKZ ZALPHA IN COMPLEX WITH DS(CG)6 (HEXAGONAL FORM)
Descriptor:Protein kinase containing Z-DNA binding domains (E.C.2.7.11.1)
Authors:De Rosa, M., Zacarias, S., Athanasiadis, A.
Deposit date:2013-06-20
Release date:2013-09-18
Modification date:2013-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.
Nucleic Acids Res., 41, 2013
4LB6
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4lb6
CRYSTAL STRUCTURE OF PKZ ZALPHA IN COMPLEX WITH DS(CG)6 (TETRAGONAL FORM)
Descriptor:Protein kinase containing Z-DNA binding domains (E.C.2.7.11.1)
Authors:De Rosa, M., Zacarias, S., Athanasiadis, A.
Deposit date:2013-06-20
Release date:2013-09-18
Modification date:2013-12-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for Z-DNA binding and stabilization by the zebrafish Z-DNA dependent protein kinase PKZ.
Nucleic Acids Res., 41, 2013
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entries available on 2014-10-22
00:00 UTC / 09:00 JST