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2K2N
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2k2n
SOLUTION STRUCTURE OF A CYANOBACTERIAL PHYTOCHROME GAF DOMAIN IN THE RED LIGHT-ABSORBING GROUND STATE
Descriptor:Sensor protein (E.C.2.7.13.3)
Authors:Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L.
Deposit date:2008-04-04
Release date:2008-09-23
Modification date:2009-09-29
Method:SOLUTION NMR
Cite:Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state.
J.Mol.Biol., 383, 2008
2KLI
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2kli
STRUCTURAL BASIS FOR THE PHOTOCONVERSION OF A PHYTOCHROME TO THE ACTIVATED FAR-RED LIGHT-ABSORBING FORM
Descriptor:Sensor protein (E.C.2.7.13.3)
Authors:Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Zhang, J., Rivera, M., Vierstra, R.D., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-07-03
Release date:2009-11-03
Modification date:2010-01-26
Method:SOLUTION NMR
Cite:Structural basis for the photoconversion of a phytochrome to the activated Pfr form
Nature, 463, 2010
2KOI
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2koi
REFINED SOLUTION STRUCTURE OF A CYANOBACTERIAL PHYTOCHROME GAF DOMAIN IN THE RED LIGHT-ABSORBING GROUND STATE
Descriptor:Sensor protein (E.C.2.7.13.3)
Authors:Cornilescu, C.C., Cornilescu, G., Ulijasz, A.T., Vierstra, R.D., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-22
Release date:2009-11-03
Modification date:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the photoconversion of a phytochrome to the activated Pfr form
Nature, 463, 2010
2VZW
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2vzw
X-RAY STRUCTURE OF THE HEME-BOUND GAF DOMAIN OF SENSORY HISTIDINE KINASE DOST OF MYCOBACTERIUM TUBERCULOSIS
Descriptor:PROBABLE HISTIDINE KINASE RESPONSE REGULATOR
Authors:Podust, L.M., Ioanoviciu, A., Ortiz de Montellano, P.R.
Deposit date:2008-08-06
Release date:2009-03-17
Modification date:2013-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:2.3 A X-Ray Structure of the Heme-Bound Gaf Domain of Sensory Histidine Kinase Dost of Mycobacterium Tuberculosis.
Biochemistry, 47, 2008
2W3D
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2w3d
STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3E
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2w3e
OXIDIZED STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3F
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2w3f
REDUCED STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2009-05-12
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3G
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2w3g
AIR-OXIDIZED STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2009-05-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2W3H
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2w3h
CYANIDE BOUND STRUCTURE OF THE FIRST GAF DOMAIN OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (GAF FAMILY PROTEIN) (E.C.2.7.3.-)
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2008-11-12
Release date:2009-03-10
Modification date:2009-05-12
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insight Into the Heme-Based Redox Sensing by Doss from Mycobacterium Tuberculosis.
J.Biol.Chem., 284, 2009
2XSS
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2xss
CRYSTAL STRUCTURE OF GAFB FROM THE HUMAN PHOSPHODIESTERASE 5
Descriptor:CGMP-SPECIFIC 3', 5'-CYCLIC PHOSPHODIESTERASE (E.C.3.1.4.35)
Authors:Schlicker, C., Russwurm, M., Steegborn, C.
Deposit date:2010-09-30
Release date:2011-05-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Gaf-B Domain from Human Phosphodiesterase 5.
Proteins, 79, 2011
2Y79
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2y79
STRUCTURE OF THE FIRST GAF DOMAIN E87A MUTANT OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:REDOX SENSOR HISTIDINE KINASE RESPONSE REGULATOR DEVS (E.C.2.7.13.3)
Authors:Cho, H.Y., Cho, H.J., Kang, B.S.
Deposit date:2011-01-30
Release date:2011-02-16
Modification date:2011-06-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Blockage of the Channel to Heme by the E87 Side Chain in the Gaf Domain of Mycobacterium Tuberculosis Doss Confers the Unique Sensitivity of Doss to Oxygen.
FEBS Lett., 585, 2011
2Y8H
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2y8h
STRUCTURE OF THE FIRST GAF DOMAIN E87G MUTANT OF MYCOBACTERIUM TUBERCULOSIS DOSS
Descriptor:TWO COMPONENT SENSOR HISTIDINE KINASE DEVS (E.C.2.7.3.-)
Authors:Cho, H.Y., Cho, H.J., Kang, B.S.
Deposit date:2011-02-07
Release date:2011-02-23
Modification date:2011-06-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Blockage of the Channel to Heme by the E87 Side Chain in the Gaf Domain of Mycobacterium Tuberculosis Doss Confers the Unique Sensitivity of Doss to Oxygen.
FEBS Lett., 585, 2011
3E0Y
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3e0y
THE CRYSTAL STRUCTURE OF A CONSERVED DOMAIN FROM A PROTEIN OF GEOBACTER SULFURREDUCENS PCA
Descriptor:Conserved domain protein
Authors:Tan, K., Bigelow, L., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-08-01
Release date:2008-09-30
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of a conserved domain from a protein of Geobacter sulfurreducens PCA
To be Published
3OOV
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3oov
CRYSTAL STRUCTURE OF A METHYL-ACCEPTING CHEMOTAXIS PROTEIN, RESIDUES 122 TO 287
Descriptor:Methyl-accepting chemotaxis protein, putative
Authors:Joachimiak, A., Duke, N.E.C., Hatzos-Skintges, C., Mulligan, R., Clancy, S., Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-31
Release date:2010-09-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a methyl-accepting chemotaxis protein, residues 122 to 287
To be Published
4G3V
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4g3v
CRYSTAL STRUCTURE OF A. AEOLICUS NLH2 GAF DOMAIN IN AN INACTIVE STATE
Descriptor:Transcriptional regulator NtrC2
Authors:Batchelor, J.D., Lee, P., Wang, A., Doucleff, M., Wemmer, D.E.
Deposit date:2012-07-15
Release date:2013-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
1MC0
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1mc0
REGULATORY SEGMENT OF MOUSE 3',5'-CYCLIC NUCLEOTIDE PHOSPHODIESTERASE 2A, CONTAINING THE GAF A AND GAF B DOMAINS
Descriptor:3',5'-cyclic nucleotide phosphodiesterase 2A
Authors:Martinez, S., Wu, A., Glavas, N., Tang, X., Turley, S., Hol, W., Beavo, J.
Deposit date:2002-08-04
Release date:2002-10-02
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:The two GAF domains in phosphodiesterase 2A have distinct roles in dimerization and in cGMP binding.
Proc.Natl.Acad.Sci.USA, 99, 2002
2K31
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2k31
SOLUTION STRUCTURE OF CGMP-BINDING GAF DOMAIN OF PHOSPHODIESTERASE 5
Descriptor:Phosphodiesterase 5A, cGMP-specific (E.C.3.1.4.35)
Authors:Heikaus, C.C., Stout, J.R., Sekharan, M.R., Eakin, C.M., Rajagopal, P., Brzovic, P.S., Beavo, J.A., Klevit, R.E.
Deposit date:2008-04-16
Release date:2008-06-03
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Solution Structure of the cGMP Binding GAF Domain from Phosphodiesterase 5: Insights into Nucleotide Selectivity, Dimerization, and cGMP-Dependent Conformational Change.
J.Biol.Chem., 283, 2008
2M7U
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2m7u
BLUE LIGHT-ABSORBING STATE OF TEPIXJ, AN ACTIVE CYANOBACTERIOCHROME DOMAIN
Descriptor:Methyl-accepting chemotaxis protein
Authors:Cornilescu, G., Cornilescu, C.C., Burgie, S.E., Walker, J.M., Markley, J.L., Ulijasz, A.T., Vierstra, R.D.
Deposit date:2013-05-01
Release date:2014-01-01
Method:SOLUTION NMR
Cite:Structural and Flexibility Variations Between the Ground and Photoactivated States of a Blue/Green Light-Absorbing Cyanobacteriochrome
To be Published
2M7V
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2m7v
GREEN LIGHT-ABSORBING STATE OF TEPIXJ, AN ACTIVE CYANOBACTERIOCHROME DOMAIN
Descriptor:Methyl-accepting chemotaxis protein
Authors:Cornilescu, G., Cornilescu, C.C., Burgie, S.E., Walker, J.M., Markley, J.L., Ulijasz, A.T., Vierstra, R.D.
Deposit date:2013-05-01
Release date:2014-01-01
Method:SOLUTION NMR
Cite:Structural and Flexibility Variations Between the Ground and Photoactivated States of a Blue/Green Light-Absorbing Cyanobacteriochrome
To be Published
2VJW
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2vjw
CRYSTAL STRUCTURE OF THE SECOND GAF DOMAIN OF DEVS FROM MYCOBACTERIUM SMEGMATIS
Descriptor:GAF FAMILY PROTEIN
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2007-12-14
Release date:2008-08-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:O2- and No-Sensing Mechanism Through the Devsr Two- Component System in Mycobacterium Smegmatis.
J.Bacteriol., 190, 2008
2VKS
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2vks
CRYSTAL STRUCTURE OF GAF-B DOMAIN OF DEVS FROM MYCOBACTERIUM SMEGMATIS
Descriptor:GAF FAMILY PROTEIN
Authors:Kang, B.S., Cho, H.Y., Cho, H.J.
Deposit date:2007-12-25
Release date:2008-08-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:O2- and No-Sensing Mechanism Through the Devsr Two- Component System in Mycobacterium Smegmatis.
J.Bacteriol., 190, 2008
3BJC
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3bjc
CRYSTAL STRUCTURE OF THE PDE5A CATALYTIC DOMAIN IN COMPLEX WITH A NOVEL INHIBITOR
Descriptor:cGMP-specific 3',5'-cyclic phosphodiesterase (E.C.3.1.4.35)
Authors:Chen, G., Wang, H., Howard, R., Cai, J., Wan, Y., Ke, H.
Deposit date:2007-12-03
Release date:2008-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:An insight into the pharmacophores of phosphodiesterase-5 inhibitors from synthetic and crystal structural studies
BIOCHEM.PHARM., 75, 2008
3CI6
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3ci6
CRYSTAL STRUCTURE OF THE GAF DOMAIN FROM ACINETOBACTER PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE
Descriptor:Phosphoenolpyruvate-protein phosphotransferase (E.C.2.7.3.9)
Authors:Cuff, M.E., Shackelford, G., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-10
Release date:2008-05-13
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of the GAF domain from Acinetobacter phosphoenolpyruvate-protein phosphotransferase.
TO BE PUBLISHED
3DBA
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3dba
CRYSTAL STRUCTURE OF THE CGMP-BOUND GAF A DOMAIN FROM THE PHOTORECEPTOR PHOSPHODIESTERASE 6C
Descriptor:Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' (E.C.3.1.4.35)
Authors:Martinez, S.E., Heikaus, C.C., Klevit, R.E., Beavo, J.A.
Deposit date:2008-05-30
Release date:2008-07-01
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The Structure of the GAF A Domain from Phosphodiesterase 6C Reveals Determinants of cGMP Binding, a Conserved Binding Surface, and a Large cGMP-dependent Conformational Change.
J.Biol.Chem., 283, 2008
3IBJ
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3ibj
X-RAY STRUCTURE OF PDE2A
Descriptor:cGMP-dependent 3',5'-cyclic phosphodiesterase (E.C.3.1.4.17)
Authors:Pandit, J.
Deposit date:2009-07-16
Release date:2009-10-27
Modification date:2010-08-11
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the X-ray structure of a near full-length construct.
Proc.Natl.Acad.Sci.USA, 106, 2009
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entries available on 2014-10-29
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