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1E3D
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1e3d
[NIFE] HYDROGENASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774
Descriptor:[NIFE] HYDROGENASE SMALL SUBUNIT, [NIFE] HYDROGENASE LARGE SUBUNIT
Authors:Matias, P.M., Soares, C.M., Saraiva, L.M., Coelho, R., Morais, J., Le Gall, J., Carrondo, M.A.
Deposit date:2000-06-14
Release date:2001-06-14
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:[Nife] Hydrogenase from Desulfovibrio Desulfuricans Atcc 27774: Gene Sequencing, Three-Dimensional Structure Determination and Refinement at 1.8 A and Modelling Studies of its Interaction with the Tetrahaem Cytochrome C3.
J.Biol.Inorg.Chem., 6, 2001
1FRV
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1frv
CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF NI-FE HYDROGENASE
Descriptor:HYDROGENASE, IRON/SULFUR CLUSTER, FE3-S4 CLUSTER, HYDRATED FE
Authors:Volbeda, A., Frey, M., Fontecilla-Camps, J.C.
Deposit date:1996-03-28
Release date:1996-11-08
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the nickel-iron hydrogenase from Desulfovibrio gigas.
Nature, 373, 1995
1YQ9
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1yq9
STRUCTURE OF THE UNREADY OXIDIZED FORM OF [NIFE] HYDROGENASE
Descriptor:Periplasmic [NiFe] hydrogenase small subunit precursor (E.C.1.12.2.1), Periplasmic [NiFe] hydrogenase large subunit precursor (E.C.1.12.2.1)
Authors:Volbeda, A., Martin, L., Cavazza, C., Matho, M., Faber, B.W., Roseboom, W., Albracht, S.P., Garcin, E., Rousset, M., Fontecilla-Camps, J.C.
Deposit date:2005-02-01
Release date:2005-04-19
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases.
J.Biol.Inorg.Chem., 10, 2005
1YQW
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1yqw
STRUCTURE OF THE OXIDIZED UNREADY FORM OF NI-FE HYDROGENASE
Descriptor:STRUCTURE OF THE OXIDIZED UNREADY FORM OF NI-FE HYDROGENASE
Authors:Volbeda, A.
Deposit date:2005-02-02
Release date:2005-04-19
Modification date:2011-08-31
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases.
J.Biol.Inorg.Chem., 10, 2005
1YRQ
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1yrq
STRUCTURE OF THE READY OXIDIZED FORM OF [NIFE]-HYDROGENASE
Descriptor:Periplasmic [NiFe] hydrogenase small subunit (E.C.1.12.2.1), Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Volbeda, A., Martin, L., Cavazza, C., Matho, M., Faber, B.W., Roseboom, W., Albracht, S.P., Garcin, E., Rousset, M., Fontecilla-Camps, J.C.
Deposit date:2005-02-04
Release date:2005-04-19
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases.
J.Biol.Inorg.Chem., 10, 2005
2FRV
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2frv
CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF NI-FE HYDROGENASE
Descriptor:PERIPLASMIC HYDROGENASE, IRON/SULFUR CLUSTER, FE3-S4 CLUSTER, CARBONMONOXIDE-(DICYANO) IRON, OXYGEN ATOM
Authors:Volbeda, A., Frey, M., Fontecilla-Camps, J.C.
Deposit date:1997-06-10
Release date:1998-06-17
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structure of the [Nife] Hydrogenase Active Site: Evidence for Biologically Uncommon Fe Ligands
J.Am.Chem.Soc., 118, 1996
2WPN
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2wpn
STRUCTURE OF THE OXIDISED, AS-ISOLATED NIFESE HYDROGENASE FROM D. VULGARIS HILDENBOROUGH
Descriptor:PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT (E.C.1.18.99.1), PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYSTEINE-CONTAINING (E.C.1.18.99.1)
Authors:Marques, M.C., Coelho, R., DeLacey, A.L., Pereira, I.A.C., Matias, P.M.
Deposit date:2009-08-07
Release date:2010-01-12
Modification date:2014-11-05
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The Three-Dimensional Structure of [Nifese] Hydrogenase from Desulfovibrio Vulgaris Hildenborough: A Hydrogenase without a Bridging Ligand in the Active Site in its Oxidised, "as- Isolated" State.
J.Mol.Biol., 396, 2010
3CUR
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3cur
STRUCTURE OF A DOUBLE METHIONINE MUTANT OF NI-FE HYDROGENASE
Descriptor:Periplasmic [NiFe] hydrogenase small subunit (E.C.1.12.2.1), Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Volbeda, A.
Deposit date:2008-04-17
Release date:2008-08-05
Modification date:2011-09-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Experimental approaches to kinetics of gas diffusion in hydrogenase
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CUS
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3cus
STRUCTURE OF A DOUBLE ILE/PHE MUTANT OF NI-FE HYDROGENASE REFINED AT 2.2 ANGSTROM RESOLUTION
Descriptor:Periplasmic [NiFe] hydrogenase small subunit (E.C.1.12.2.1), Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Volbeda, A.
Deposit date:2008-04-17
Release date:2008-08-05
Modification date:2011-09-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Experimental approaches to kinetics of gas diffusion in hydrogenase
Proc.Natl.Acad.Sci.Usa, 105, 2008
3H3X
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3h3x
STRUCTURE OF THE V74M LARGE SUBUNIT MUTANT OF NI-FE HYDROGENASE IN AN OXIDIZED STATE
Descriptor:Periplasmic [NiFe] hydrogenase small subunit, Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Volbeda, A., Martinez, N., Martin, L., Fontecilla-Camps, J.C.
Deposit date:2009-04-17
Release date:2009-07-21
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Introduction of methionines in the gas channel makes [NiFe] hydrogenase aero-tolerant
J.Am.Chem.Soc., 131, 2009
3MYR
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3myr
CRYSTAL STRUCTURE OF [NIFE] HYDROGENASE FROM ALLOCHROMATIUM VINOSUM IN ITS NI-A STATE
Descriptor:Hydrogenase (NiFe) small subunit HydA (E.C.1.12.99.6), Nickel-dependent hydrogenase large subunit
Authors:Ogata, H., Kellers, P., Lubitz, W.
Deposit date:2010-05-11
Release date:2010-08-04
Modification date:2010-10-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of the [NiFe] hydrogenase from the photosynthetic bacterium Allochromatium vinosum: characterization of the oxidized enzyme (Ni-A state).
J.Mol.Biol., 402, 2010
3ZE6
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3ze6
3D STRUCTURE OF THE NI-FE-SE HYDROGENASE FROM D. VULGARIS HILDENBOROUGH IN THE AS-ISOLATED OXIDIZED STATE AT 1.50 ANGSTROMS
Descriptor:PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT (E.C.1.12.7.2), PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYS SELENOCYSTEINE-CONTAINING (E.C.1.12.7.2)
Authors:Marques, M.C., Coelho, R., Pereira, I.A.C., Matias, P.M.
Deposit date:2012-12-03
Release date:2013-06-12
Modification date:2014-11-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Redox State-Dependent Changes in the Crystal Structure of [Nifese] Hydrogenase from Desulfovibrio Vulgaris Hildenborough
Int.J.Hydrogen Energy, 2013
3ZE7
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3ze7
3D STRUCTURE OF THE NI-FE-SE HYDROGENASE FROM D. VULGARIS HILDENBOROUGH IN THE REDUCED STATE AT 1.95 ANGSTROMS
Descriptor:PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT (E.C.1.12.7.2), PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYSTEINE-CONTAINING (E.C.1.12.7.2)
Authors:Marques, M.C., Coelho, R., Pereira, I.A.C., Matias, P.M.
Deposit date:2012-12-03
Release date:2013-06-12
Modification date:2014-11-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Redox State-Dependent Changes in the Crystal Structure of [Nifese] Hydrogenase from Desulfovibrio Vulgaris Hildenborough
Int.J.Hydrogen Energy, 38, 2013
3ZE8
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3ze8
3D STRUCTURE OF THE NI-FE-SE HYDROGENASE FROM D. VULGARIS HILDENBOROUGH IN THE REDUCED STATE AT 1.95 ANGSTROMS
Descriptor:PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT (E.C.1.12.7.2), PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYSTEINE-CONTAINING (E.C.1.12.7.2)
Authors:Marques, M.C., Coelho, R., Pereira, I.A.C., Matias, P.M.
Deposit date:2012-12-03
Release date:2013-06-12
Modification date:2014-11-05
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Redox State-Dependent Changes in the Crystal Structure of [Nifese] Hydrogenase from Desulfovibrio Vulgaris Hildenborough
Int.J.Hydrogen Energy, 38, 2013
3ZE9
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3ze9
3D STRUCTURE OF THE NIFESE HYDROGENASE FROM D. VULGARIS HILDENBOROUGH IN THE OXIDIZED AS-ISOLATED STATE AT 1.33 ANGSTROMS
Descriptor:PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT (E.C.1.12.7.2), PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYSTEINE-CONTAINING (E.C.1.12.7.2)
Authors:Marques, M.C., Coelho, R., Pereira, I.A.C., Matias, P.M.
Deposit date:2012-12-03
Release date:2013-06-12
Modification date:2014-11-05
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Redox State-Dependent Changes in the Crystal Structure of [Nifese] Hydrogenase from Desulfovibrio Vulgaris Hildenborough
Int.J.Hydrogen Energy, 38, 2013
3ZEA
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3zea
3D STRUCTURE OF THE NIFESE HYDROGENASE FROM D. VULGARIS HILDENBOROUGH IN THE REDUCED STATE AT 1.82 ANGSTROMS
Descriptor:PERIPLASMIC [NIFESE] HYDROGENASE, SMALL SUBUNIT (E.C.1.12.7.2), PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYSTEINE-CONTAINING (E.C.1.12.7.2)
Authors:Marques, M.C., Coelho, R., Pereira, I.A.C., Matias, P.M.
Deposit date:2012-12-03
Release date:2013-06-12
Modification date:2014-11-05
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Redox State-Dependent Changes in the Crystal Structure of [Nifese] Hydrogenase from Desulfovibrio Vulgaris Hildenborough
Int.J.Hydrogen Energy, 38, 2013
4UPE
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4upe
STRUCTURE OF THE UNREADY NI-A STATE OF THE S499C MUTANT OF D. FRUCTOSOVORANS NIFE-HYDROGENASE
Descriptor:NIFE-HYDROGENASE SMALL SUBUNIT (E.C.1.12.2.1), NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT (E.C.1.12.2.1)
Authors:Volbeda, A., Martin, L., Barbier, E., Gutierrez-Sanz, O., DeLacey, A.L., Liebgott, P.P., Dementin, S., Rousset, M., Fontecilla-Camps, J.C.
Deposit date:2014-06-16
Release date:2014-10-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Studies of [Nife]-Hydrogenase Mutants: Towards Consensus Structures for the Elusive Unready Oxidized States.
J.Biol.Inorg.Chem., 2014
4UPV
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4upv
LOW X-RAY DOSE STRUCTURE OF A NI-A NI-SOX MIXTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT
Descriptor:NIFE-HYDROGENASE SMALL SUBUNIT (E.C.1.12.2.1), NIFE-HYDROGENASE LARGE SUBUNIT (E.C.1.12.2.1)
Authors:Volbeda, A., Martin, L., Barbier, E., Gutierrez-Sanz, O., DeLacey, A.L., Liebgott, P.P., Dementin, S., Rousset, M., Fontecilla-Camps, J.C.
Deposit date:2014-06-18
Release date:2014-10-29
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystallographic Studies of [Nife]-Hydrogenase Mutants: Towards Consensus Structures for the Elusive Unready Oxidized States.
J.Biol.Inorg.Chem., 2014
4UQL
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4uql
HIGH-RESOLUTION STRUCTURE OF A NI-A NI-SOX MIXTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT
Descriptor:HYDROGENASE (NIFE) SMALL SUBUNIT HYDA (E.C.1.12.2.1), NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT (E.C.1.12.2.1)
Authors:Volbeda, A., Martin, L., Barbier, E., Gutierrez-Sanz, O., DeLacey, A.L., Liebgott, P.P., Dementin, S., Rousset, M., Fontecilla-Camps, J.C.
Deposit date:2014-06-24
Release date:2014-10-29
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystallographic Studies of [Nife]-Hydrogenase Mutants: Towards Consensus Structures for the Elusive Unready Oxidized States.
J.Biol.Inorg.Chem., 2014
4UQP
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4uqp
HIGH-RESOLUTION STRUCTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT AFTER EXPOSURE TO AIR
Descriptor:PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT (E.C.1.12.2.1), PERIPLASMIC [NIFE] HYDROGENASE LARGE SUBUNIT (E.C.1.12.2.1)
Authors:Volbeda, A., Martin, L., Barbier, E., Gutierrez-Sanz, O., DeLacey, A.L., Liebgott, P.P., Dementin, S., Rousset, M., Fontecilla-Camps, J.C.
Deposit date:2014-06-24
Release date:2014-10-29
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystallographic Studies of [Nife]-Hydrogenase Mutants: Towards Consensus Structures for the Elusive Unready Oxidized States.
J.Biol.Inorg.Chem., 2014
4URH
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4urh
HIGH-RESOLUTION STRUCTURE OF PARTIALLY OXIDIZED D. FRUCTOSOVORANS NIFE-HYDROGENASE
Descriptor:HYDROGENASE (NIFE) SMALL SUBUNIT HYDA (E.C.1.12.2.1), NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT (E.C.1.12.2.1)
Authors:Volbeda, A., Martin, L., Barbier, E., Gutierrez-Sanz, O., DeLacey, A.L., Liebgott, P.P., Dementin, S., Rousset, M., Fontecilla-Camps, J.C.
Deposit date:2014-06-30
Release date:2014-10-29
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystallographic Studies of [Nife]-Hydrogenase Mutants: Towards Consensus Structures for the Elusive Unready Oxidized States.
J.Biol.Inorg.Chem., 2014
1CC1
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1cc1
CRYSTAL STRUCTURE OF A REDUCED, ACTIVE FORM OF THE NI-FE-SE HYDROGENASE FROM DESULFOMICROBIUM BACULATUM
Descriptor:HYDROGENASE (E.C.1.18.99.1)
Authors:Garcin, E., Vernede, X., Hatchikian, E.C., Volbeda, A., Frey, M., Fontecilla-Camps, J.C.
Deposit date:1999-03-03
Release date:1999-06-01
Modification date:2014-08-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The crystal structure of a reduced [NiFeSe] hydrogenase provides an image of the activated catalytic center
Structure Fold.Des., 7, 1999
1FRF
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1frf
CRYSTAL STRUCTURE OF THE NI-FE HYDROGENASE FROM DESULFOVIBRIO FRUCTOSOVORANS
Descriptor:[NI-FE] HYDROGENASE (E.C.1.18.99.1)
Authors:Montet, Y., Volbeda, A., Piras, C., Hatchikian, E.C., Frey, M., Fontecilla, J.C.
Deposit date:1998-07-21
Release date:1998-07-29
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:3Fe-4S] to [4Fe-4S] cluster conversion in Desulfovibrio fructosovorans [NiFe] hydrogenase by site-directed mutagenesis
Proc.Natl.Acad.Sci.USA, 95, 1998
1H2A
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1h2a
SINGLE CRYSTALS OF HYDROGENASE FROM DESULFOVIBRIO VULGARIS
Descriptor:HYDROGENASE, IRON/SULFUR CLUSTER, FE3-S4 CLUSTER, NI-FE ACTIVE CENTER
Authors:Higuchi, Y., Yasuoka, N.
Deposit date:1997-10-17
Release date:1999-02-09
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unusual ligand structure in Ni-Fe active center and an additional Mg site in hydrogenase revealed by high resolution X-ray structure analysis.
Structure, 5, 1997
1H2R
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1h2r
THREE-DIMENSIONAL STRUCTURE OF NI-FE HYDROGENASE FROM DESULFIVIBRIO VULGARIS MIYAZAKI F IN THE REDUCED FORM AT 1.4 A RESOLUTION
Descriptor:PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT) (1.12.2.1)
Authors:Higuchi, Y., Ogata, H.
Deposit date:1999-06-14
Release date:2000-01-05
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Removal of the bridging ligand atom at the Ni-Fe active site of [NiFe] hydrogenase upon reduction with H2, as revealed by X-ray structure analysis at 1.4 A resolution.
Structure Fold.Des., 7, 1999
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