Mine: PDB keyword search results

4ILT
  • Download 4ilt
  • View 4ilt
4ilt
STRUCTURE OF THE DIOXYGENASE DOMAIN OF SACTE_2871, A NOVEL DIOXYGENASE CARBOHYDRATE-BINDING PROTEIN FUSION FROM THE CELLULOLYTIC BACTERIUM STREPTOMYCES SP. SIREXAA-E
Descriptor:Intradiol ring-cleavage dioxygenase
Authors:Bianchetti, C.M., Takasuka, T.E., Bergeman, L.F., Harmann, C.H., Fox, B.G.
Deposit date:2012-12-31
Release date:2013-05-15
Modification date:2013-07-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Fusion of Dioxygenase and Lignin-binding Domains in a Novel Secreted Enzyme from Cellulolytic Streptomyces sp. SirexAA-E.
J.Biol.Chem., 288, 2013
4WHO
  • Download 4who
  • View 4who
4who
RESTING PROTOCATECHUATE 3,4-DIOXYGENASE (PSEUDOMONAS PUTIDA) AT PH 8.5
Descriptor:3,4-PCD alpha subunit (E.C.1.13.11.13), 3,4-PCD beta subunit (E.C.1.13.11.13)
Authors:Knoot, C.J., Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Modification date:2015-01-28
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHP
  • Download 4whp
  • View 4whp
4whp
RESTING PROTOCATECHUATE 3,4-DIOXYGENASE (PSEUDOMONAS PUTIDA) AT PH 6.5
Descriptor:3,4-PCD alpha subunit (E.C.1.13.11.13), 3,4-PCD beta subunit (E.C.1.13.11.13)
Authors:Knoot, C.J., Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Modification date:2015-01-28
Method:X-RAY DIFFRACTION (1.541 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHR
  • Download 4whr
  • View 4whr
4whr
ANHYDRIDE REACTION INTERMEDIATE TRAPPED IN PROTOCATECHUATE 3,4-DIOXYGENASE (PSEUDOMONAS PUTIDA) AT PH 8.5
Descriptor:3,4-PCD alpha subunit (E.C.1.13.11.13), 3,4-PCD beta subunit (E.C.1.13.11.13)
Authors:Knoot, C.J., Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Modification date:2015-01-28
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4WHS
  • Download 4whs
  • View 4whs
4whs
4-FLUOROCATECHOL BOUND TO PROTOCATECHUATE 3,4-DIOXYGENASE (PSEUDOMONAS PUTIDA) AT PH 8.5
Descriptor:3,4-PCD alpha subunit (E.C.1.13.11.13), 3,4-PCD beta subunit (E.C.1.13.11.13)
Authors:Knoot, C.J., Purpero, V.M., Lipscomb, J.D.
Deposit date:2014-09-23
Release date:2014-12-31
Modification date:2015-01-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase.
Proc.Natl.Acad.Sci.USA, 112, 2015
1EO2
  • Download 1eo2
  • View 1eo2
1eo2
CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3)/PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., D'Argenio, D.A., Ornston, L.N., Ohlendorf, D.H.
Deposit date:2000-03-21
Release date:2000-08-09
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
Biochemistry, 39, 2000
1EO9
  • Download 1eo9
  • View 1eo9
1eo9
CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE AT PH < 7.0
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3)/PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., D'Argenio, D.A., Ornston, L.N., Ohlendorf, D.H.
Deposit date:2000-03-22
Release date:2000-08-09
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
Biochemistry, 39, 2000
1EOA
  • Download 1eoa
  • View 1eoa
1eoa
CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE IN COMPLEX WITH CYANIDE
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3)/PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., D'Argenio, D.A., Ornston, L.N., Ohlendorf, D.H.
Deposit date:2000-03-22
Release date:2000-08-09
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
Biochemistry, 39, 2000
1EOB
  • Download 1eob
  • View 1eob
1eob
CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE IN COMPLEX WITH 3,4-DIHYDROXYBENZOATE
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3)/PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., D'Argenio, D.A., Ornston, L.N., Ohlendorf, D.H.
Deposit date:2000-03-22
Release date:2000-08-09
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
Biochemistry, 39, 2000
1EOC
  • Download 1eoc
  • View 1eoc
1eoc
CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE IN COMPLEX WITH 4-NITROCATECHOL
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3)/PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., D'Argenio, D.A., Ornston, L.N., Ohlendorf, D.H.
Deposit date:2000-03-22
Release date:2000-08-09
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
Biochemistry, 39, 2000
1YKK
  • Download 1ykk
  • View 1ykk
1ykk
PROTOCATECHUATE 3,4-DIOXYGENASE Y408C MUTANT
Descriptor:Protocatechuate 3,4-dioxygenase alpha chain (E.C.1.13.11.3), Protocatechuate 3,4-dioxygenase beta chain (E.C.1.13.11.3)
Authors:Brown, C.K., Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKL
  • Download 1ykl
  • View 1ykl
1ykl
PROTOCATECHUATE 3,4-DIOXYGENASE Y408C MUTANT BOUND TO DHB
Descriptor:Protocatechuate 3,4-dioxygenase alpha chain (E.C.1.13.11.3), Protocatechuate 3,4-dioxygenase beta chain (E.C.1.13.11.3)
Authors:Brown, C.K., Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKM
  • Download 1ykm
  • View 1ykm
1ykm
PROTOCATECHUATE 3,4-DIOXYGENASE Y408E MUTANT
Descriptor:Protocatechuate 3,4-dioxygenase alpha chain (E.C.1.13.11.3), Protocatechuate 3,4-dioxygenase beta chain (E.C.1.13.11.3)
Authors:Brown, C.K., Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKN
  • Download 1ykn
  • View 1ykn
1ykn
PROTOCATECHUATE 3,4-DIOXYGENASE Y408E MUTANT BOUND TO DHB
Descriptor:Protocatechuate 3,4-dioxygenase alpha chain (E.C.1.13.11.3), Protocatechuate 3,4-dioxygenase beta chain (E.C.1.13.11.3)
Authors:Brown, C.K., Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKO
  • Download 1yko
  • View 1yko
1yko
PROTOCATECHUATE 3,4-DIOXYGENASE Y408H MUTANT
Descriptor:Protocatechuate 3,4-dioxygenase alpha chain (E.C.1.13.11.3), Protocatechuate 3,4-dioxygenase beta chain (E.C.1.13.11.3)
Authors:Brown, C.K., Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
1YKP
  • Download 1ykp
  • View 1ykp
1ykp
PROTOCATECHUATE 3,4-DIOXYGENASE Y408H MUTANT BOUND TO DHB
Descriptor:Protocatechuate 3,4-dioxygenase alpha chain (E.C.1.13.11.3), Protocatechuate 3,4-dioxygenase beta chain (E.C.1.13.11.3)
Authors:Brown, C.K., Ohlendorf, D.H.
Deposit date:2005-01-18
Release date:2005-08-16
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis
Biochemistry, 44, 2005
2BUM
  • Download 2bum
  • View 2bum
2bum
CRYSTAL STRUCTURE OF WILD-TYPE PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-14
Release date:2006-09-05
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
2BUQ
  • Download 2buq
  • View 2buq
2buq
CRYSTAL STRUCTURE OF WILD-TYPE PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 IN COMPLEX WITH CATECHOL
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-17
Release date:2006-09-05
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
2BUR
  • Download 2bur
  • View 2bur
2bur
CRYSTAL STRUCTURE OF WILD-TYPE PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 IN COMPLEX WITH 4-HYDROXYBENZOATE
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-17
Release date:2006-09-05
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
2BUT
  • Download 2but
  • View 2but
2but
CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R457S - APO
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-17
Release date:2006-09-05
Modification date:2009-09-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
2BUU
  • Download 2buu
  • View 2buu
2buu
CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R457S IN COMPLEX WITH 4-NITROCATECHOL
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-17
Release date:2006-10-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Studies of Intradiol Dioxygenases.
Phd Thesis, 2001
2BUV
  • Download 2buv
  • View 2buv
2buv
CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R457S IN COMPLEX WITH PROTOCATECHUATE
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-17
Release date:2006-09-04
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase
Annu.Rev.Microbiol., 58, 2004
2BUW
  • Download 2buw
  • View 2buw
2buw
CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R457S IN COMPLEX WITH 4-HYDROXYBENZOATE
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-20
Release date:2006-10-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Studies of Intradiol Dioxygenases.
Phd Thesis, 2001
2BUX
  • Download 2bux
  • View 2bux
2bux
CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R133H
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-20
Release date:2006-10-26
Modification date:2009-09-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Studies of Intradiol Dioxygenases.
Phd Thesis, 2001
2BUY
  • Download 2buy
  • View 2buy
2buy
CRYSTAL STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM ACINETOBACTER SP. ADP1 MUTANT R133H IN COMPLEX WITH CATECHOL
Descriptor:PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN (E.C.1.13.11.3), PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN (E.C.1.13.11.3)
Authors:Vetting, M.W., Valley, M.P., D'Argenio, D.A., Ornston, L.N., Lipscomb, J.D., Ohlendorf, D.H.
Deposit date:2005-06-20
Release date:2006-10-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Studies of Intradiol Dioxygenases.
Phd Thesis, 2001
Copyright © 2013-2015 Protein Data Bank Japan
This is the static version of the PDBj web interface with limited functionality. Try the full version instead.
  • Everything
  • PDBID/Keywords
  • Author
  • Chemie
  • Sequence
  • ?
106082
entries available on 2015-01-28
00:00 UTC / 09:00 JST