Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8A3V
DownloadVisualize
BU of 8a3v by Molmil
Crystal structure of the Vibrio cholerae replicative helicase (VcDnaB) in complex with its loader protein (VcDciA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DUF721 domain-containing protein, MAGNESIUM ION, ...
Authors:Walbott, H, Quevillon-Cheruel, S, Cargemel, C.
Deposit date:2022-06-09
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The LH-DH module of bacterial replicative helicases is the common binding site for DciA and other helicase loaders.
Acta Crystallogr D Struct Biol, 79, 2023
7T23
DownloadVisualize
BU of 7t23 by Molmil
E. coli DnaB bound to two DnaG C-terminal domains, ssDNA, ADP and AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA primase, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2023-01-18
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
7T22
DownloadVisualize
BU of 7t22 by Molmil
E. coli DnaB bound to three DnaG C-terminal domains, ssDNA, ADP and AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA primase, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2023-01-18
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
7T21
DownloadVisualize
BU of 7t21 by Molmil
E. coli DnaB bound to ssDNA and ADP-AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
7T20
DownloadVisualize
BU of 7t20 by Molmil
E. coli DnaB bound to ssDNA and AMPPNP
Descriptor: DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Oakley, A.J, Xu, Z.Q.
Deposit date:2021-12-02
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Sequence of conformation changes of DnaB helicase during DNA unwinding and priming in Escherichia coli
To Be Published
7QXM
DownloadVisualize
BU of 7qxm by Molmil
Crystal structure of the Vibrio cholerae replicative helicase (DnaB)
Descriptor: Replicative DNA helicase
Authors:Legrand, P, Quevillon-Cheruel, S, Walbott, H, Cargemel, C.
Deposit date:2022-01-26
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The apo-form of the Vibrio cholerae replicative helicase DnaB is a labile and inactive planar trimer of dimers.
Febs Lett., 596, 2022
6T66
DownloadVisualize
BU of 6t66 by Molmil
Crystal structure of the Vibrio cholerae replicative helicase (DnaB) with GDP-AlF4
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Replicative DNA helicase, ...
Authors:Legrand, P, Quevillon-Cheruel, S, Li de la Sierra-Gallay, I, Walbott, H.
Deposit date:2019-10-17
Release date:2021-04-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Study of the DnaB:DciA interplay reveals insights into the primary mode of loading of the bacterial replicative helicase.
Nucleic Acids Res., 49, 2021
6QEM
DownloadVisualize
BU of 6qem by Molmil
E. coli DnaBC complex bound to ssDNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein DnaC, MAGNESIUM ION, ...
Authors:Arias-Palomo, E, Puri, N, O'Shea Murray, V.L, Yan, Q, Berger, J.M.
Deposit date:2019-01-08
Release date:2019-03-06
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Physical Basis for the Loading of a Bacterial Replicative Helicase onto DNA.
Mol.Cell, 74, 2019
6QEL
DownloadVisualize
BU of 6qel by Molmil
E. coli DnaBC apo complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA replication protein dnaC, MAGNESIUM ION, ...
Authors:Arias-Palomo, E, Puri, N, O'Shea Murray, V.L, Yan, Q, Berger, J.M.
Deposit date:2019-01-08
Release date:2019-03-06
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Physical Basis for the Loading of a Bacterial Replicative Helicase onto DNA.
Mol.Cell, 74, 2019
6BBM
DownloadVisualize
BU of 6bbm by Molmil
Mechanisms of Opening and Closing of the Bacterial Replicative Helicase: The DnaB Helicase and Lambda P Helicase Loader Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Replication protein P, Replicative DNA helicase
Authors:Chase, J, Catalano, A, Noble, A.J, Eng, E.T, Olinares, P.D.B, Molloy, K, Pakotiprapha, D, Samuels, M, Chain, B, des Georges, A, Jeruzalmi, D.
Deposit date:2017-10-18
Release date:2019-03-06
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Mechanisms of opening and closing of the bacterial replicative helicase.
Elife, 7, 2018
4ZC0
DownloadVisualize
BU of 4zc0 by Molmil
Structure of a dodecameric bacterial helicase
Descriptor: HEXATANTALUM DODECABROMIDE, Replicative DNA helicase
Authors:Bazin, A, Cherrier, M.V, Gutsche, I, Timmins, J, Terradot, L.
Deposit date:2015-04-15
Release date:2015-10-21
Method:X-RAY DIFFRACTION (6.7 Å)
Cite:Structure and primase-mediated activation of a bacterial dodecameric replicative helicase.
Nucleic Acids Res., 43, 2015
4NMN
DownloadVisualize
BU of 4nmn by Molmil
Aquifex aeolicus replicative helicase (DnaB) complexed with ADP, at 3.3 resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Replicative DNA helicase, ...
Authors:Lyubimov, A.Y, Strycharska, M.S, Erzberger, J.P, Berger, J.M.
Deposit date:2013-11-15
Release date:2014-01-29
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:Nucleotide and partner-protein control of bacterial replicative helicase structure and function.
Mol.Cell, 52, 2013
4M4W
DownloadVisualize
BU of 4m4w by Molmil
Mechanistic implications for the bacterial primosome assembly of the structure of a helicase-helicase loader complex
Descriptor: DNA primase, Primosomal protein DnaI, Replicative helicase
Authors:Liu, B, Eliason, W.K, Steitz, T.A.
Deposit date:2013-08-07
Release date:2013-09-25
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (6.1 Å)
Cite:Structure of a helicase-helicase loader complex reveals insights into the mechanism of bacterial primosome assembly.
Nat Commun, 4, 2013
4ESV
DownloadVisualize
BU of 4esv by Molmil
A New Twist on the Translocation Mechanism of Helicases from the Structure of DnaB with its Substrates
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', ...
Authors:Itsathitphaisarn, O, Wing, R.A, Eliason, W.K, Wang, J, Steitz, T.A.
Deposit date:2012-04-23
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Hexameric Helicase DnaB Adopts a Nonplanar Conformation during Translocation.
Cell(Cambridge,Mass.), 151, 2012
3GXV
DownloadVisualize
BU of 3gxv by Molmil
Three-dimensional structure of N-terminal domain of DnaB Helicase from Helicobacter pylori and its interactions with primase
Descriptor: Replicative DNA helicase
Authors:Kashav, T, Nitharwal, R, Syed, A.A, Gabdoulkhakov, A, Saenger, W, Dhar, K.S, Gourinath, S.
Deposit date:2009-04-03
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of N-terminal domain of DnaB helicase and helicase-primase interactions in Helicobacter pylori
Plos One, 4, 2009
3BGW
DownloadVisualize
BU of 3bgw by Molmil
The Structure Of A DnaB-Like Replicative Helicase And Its Interactions With Primase
Descriptor: DNAB-Like Replicative Helicase
Authors:Wang, G, Klein, M.G, Tokonzaba, E, Zhang, Y, Holden, L.G, Chen, X.S.
Deposit date:2007-11-27
Release date:2007-12-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.91 Å)
Cite:The structure of a DnaB-family replicative helicase and its interactions with primase.
Nat.Struct.Mol.Biol., 15, 2008
2VYF
DownloadVisualize
BU of 2vyf by Molmil
Crystal Structure of the DnaC
Descriptor: GOLD ION, REPLICATIVE DNA HELICASE
Authors:Lo, Y.H, Tsai, K.L, Sun, Y.J, Hsiao, C.D.
Deposit date:2008-07-23
Release date:2008-12-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Crystal Structure of a Replicative Hexameric Helicase Dnac and its Complex with Single-Stranded DNA.
Nucleic Acids Res., 37, 2009
2VYE
DownloadVisualize
BU of 2vye by Molmil
Crystal Structure of the DnaC-ssDNA complex
Descriptor: 5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP)-3', REPLICATIVE DNA HELICASE
Authors:Lo, Y.H, Tsai, K.L, Sun, Y.J, Hsiao, C.D.
Deposit date:2008-07-23
Release date:2008-12-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:The Crystal Structure of a Replicative Hexameric Helicase Dnac and its Complex with Single-Stranded DNA.
Nucleic Acids Res., 37, 2009
2R6E
DownloadVisualize
BU of 2r6e by Molmil
Crystal Form B2
Descriptor: Replicative helicase, SULFATE ION
Authors:Bailey, S, Eliason, W.K, Steitz, T.A.
Deposit date:2007-09-05
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (5.019 Å)
Cite:Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase
Science, 318, 2007
2R6D
DownloadVisualize
BU of 2r6d by Molmil
Crystal Form B1
Descriptor: Replicative helicase
Authors:Bailey, S, Eliason, W.K, Steitz, T.A.
Deposit date:2007-09-05
Release date:2008-06-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase
Science, 318, 2007
2R6C
DownloadVisualize
BU of 2r6c by Molmil
Crystal Form BH2
Descriptor: DnaG Primase, Helicase Binding Domain, Replicative helicase
Authors:Bailey, S, Eliason, W.K, Steitz, T.A.
Deposit date:2007-09-05
Release date:2008-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase
Science, 318, 2007
2R6A
DownloadVisualize
BU of 2r6a by Molmil
Crystal Form BH1
Descriptor: DnaG Primase, Helicase Binding Domain, Replicative helicase, ...
Authors:Bailey, S, Eliason, W.K, Steitz, T.A.
Deposit date:2007-09-05
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase
Science, 318, 2007
2R5U
DownloadVisualize
BU of 2r5u by Molmil
Crystal structure of the N-terminal domain of DnaB helicase from Mycobacterium tuberculosis
Descriptor: GLYCEROL, Replicative DNA helicase
Authors:Biswas, T, Tsodikov, O.V.
Deposit date:2007-09-04
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hexameric ring structure of the N-terminal domain of Mycobacterium tuberculosis DnaB helicase.
Febs J., 275, 2008
2Q6T
DownloadVisualize
BU of 2q6t by Molmil
Crystal structure of the Thermus aquaticus DnaB monomer
Descriptor: DnaB replication fork helicase, SULFATE ION
Authors:Bailey, S, Eliason, W.K, Steitz, T.A.
Deposit date:2007-06-05
Release date:2007-07-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of the Thermus aquaticus DnaB helicase monomer.
Nucleic Acids Res., 35, 2007
1JWE
DownloadVisualize
BU of 1jwe by Molmil
NMR Structure of the N-Terminal Domain of E. Coli Dnab Helicase
Descriptor: PROTEIN (DNAB HELICASE)
Authors:Weigelt, J, Brown, S.E, Miles, C.S, Dixon, N.E, Otting, G.
Deposit date:1999-01-22
Release date:1999-01-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of the N-terminal domain of E. coli DnaB helicase: implications for structure rearrangements in the helicase hexamer.
Structure Fold.Des., 7, 1999

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon