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8V9Q
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BU of 8v9q by Molmil
Crystal structure of mGalNAc-T1 in complex with the mucin glycopeptide Muc5AC-13, Mn2+, and UDP.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Samara, N.L, Collette, A.M.
Deposit date:2023-12-08
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:An unusual dual sugar-binding lectin domain controls the substrate specificity of a mucin-type O-glycosyltransferase.
Sci Adv, 10, 2024
8R8C
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BU of 8r8c by Molmil
Structure of the N-terminal domain of CMA from Cucumis melo in complex with N-acetylgalactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-galactopyranose, CADMIUM ION, ...
Authors:Varrot, A.
Deposit date:2023-11-28
Release date:2023-12-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin.
Beilstein J Org Chem, 20, 2024
8R8A
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BU of 8r8a by Molmil
Structure of the N-terminal domain of CMA in complex with N-acetyllactosamine
Descriptor: CADMIUM ION, Nigrin b-like, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Lundstrom, J, Varrot, A.
Deposit date:2023-11-28
Release date:2023-12-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.317 Å)
Cite:Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin.
Beilstein J Org Chem, 20, 2024
7Y78
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BU of 7y78 by Molmil
Crystal structure of Cry78Aa
Descriptor: 1,2-ETHANEDIOL, AMMONIUM ION, Toxin
Authors:Cao, B.B, Nie, Y.F, Wang, N.C, Guan, Z.Y, Zhang, D.L, Zhang, J.
Deposit date:2022-06-21
Release date:2022-08-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of Cry78Aa from Bacillus thuringiensis provides insights into its insecticidal activity.
Commun Biol, 5, 2022
7KD2
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BU of 7kd2 by Molmil
Ricin bound to VHH antibody V11B2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Ricin chain A, ...
Authors:Rudolph, M.J.
Deposit date:2020-10-07
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
7KDU
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BU of 7kdu by Molmil
Ricin bound to VHH antibody V5E4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ricin chain A, ...
Authors:Rudolph, M.J.
Deposit date:2020-10-09
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
7KBK
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BU of 7kbk by Molmil
Ricin bound to VHH antibody V6E11
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ricin, ...
Authors:Rudolph, M.J.
Deposit date:2020-10-02
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.091 Å)
Cite:Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
7KDM
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BU of 7kdm by Molmil
Ricin bound to VHH antibody V5G6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-RON nanobody, CHLORIDE ION, ...
Authors:Rudolph, M.J.
Deposit date:2020-10-08
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
7KC9
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BU of 7kc9 by Molmil
Ricin bound to VHH antibody V5G1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Ricin chain A, ...
Authors:Rudolph, M.J.
Deposit date:2020-10-05
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
7KBI
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BU of 7kbi by Molmil
Ricin bound to VHH antibody V5E1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Ricin chain A, ...
Authors:Rudolph, M.J.
Deposit date:2020-10-02
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.049 Å)
Cite:Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
7KD0
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BU of 7kd0 by Molmil
Ricin bound to VHH antibody V2C11
Descriptor: 1,2-ETHANEDIOL, Anti-RON nanobody, CHLORIDE ION, ...
Authors:Rudolph, M.J.
Deposit date:2020-10-07
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.768 Å)
Cite:Structural Analysis of Toxin-Neutralizing, Single-Domain Antibodies that Bridge Ricin's A-B Subunit Interface.
J.Mol.Biol., 433, 2021
6E7I
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BU of 6e7i by Molmil
Human ppGalNAcT2 I253A/L310A Mutant with EA2 and UDP
Descriptor: EA2, MANGANESE (II) ION, Polypeptide N-acetylgalactosaminyltransferase 2, ...
Authors:Bertozzi, C.R, Schumann, B, Agbay, A.J.
Deposit date:2018-07-26
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells.
Mol.Cell, 78, 2020
6NQT
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BU of 6nqt by Molmil
GalNac-T2 soaked with UDP-sugar
Descriptor: MANGANESE (II) ION, Polypeptide N-acetylgalactosaminyltransferase 2, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R},6~{R})-3-(hex-5-ynoylamino)-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl] hydrogen phosphate
Authors:Fernandez, D, Bertozzi, C.R, Schumann, B, Agbay, A.
Deposit date:2019-01-21
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells.
Mol.Cell, 78, 2020
6S24
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BU of 6s24 by Molmil
Crystal structure of the TgGalNAc-T3 in complex with UDP, manganese and the peptide 3
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ALA-THR-GLY-ALA-GLY-ALA-GLY-ALA-GLY-THR-THR-PRO-GLY-PRO, ...
Authors:de las Rivas, M, Daniel, E.J.P, Narimatsu, Y, Companon, I, Kato, K, Hermosilla, P, Thureau, A, Ceballos-Laita, L, Coelho, H, Bernado, P, Marcelo, F, Hansen, L, Lostao, A, Corzana, F, Clausen, H, Gerken, T.A, Hurtado-Guerrero, R.
Deposit date:2019-06-20
Release date:2019-12-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Molecular basis for fibroblast growth factor 23 O-glycosylation by GalNAc-T3.
Nat.Chem.Biol., 16, 2020
6S22
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BU of 6s22 by Molmil
Crystal structure of the TgGalNAc-T3 in complex with UDP, manganese and FGF23c
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:de las Rivas, M, Daniel, E.J.P, Narimatsu, Y, Companon, I, Kato, K, Hermosilla, P, Thureau, A, Ceballos-Laita, L, Coelho, H, Bernado, P, Marcelo, F, Hansen, L, Lostao, A, Corzana, F, Clausen, H, Gerken, T.A, Hurtado-Guerrero, R.
Deposit date:2019-06-20
Release date:2019-12-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Molecular basis for fibroblast growth factor 23 O-glycosylation by GalNAc-T3.
Nat.Chem.Biol., 16, 2020
6PXU
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BU of 6pxu by Molmil
Crystal structure of human GalNAc-T12 bound to a diglycosylated peptide, Mn2+, and UDP
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, GAGATGAGAGYYITPRTGAGA, ...
Authors:Samara, N.L, Fernandez, A.J.
Deposit date:2019-07-27
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:The structure of the colorectal cancer-associated enzyme GalNAc-T12 reveals how nonconserved residues dictate its function.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IFA
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BU of 6ifa by Molmil
Structure of beta-trefoil lectin from Entamoeba histolytica
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, lectin
Authors:Suguna, K, Khan, F.
Deposit date:2018-09-19
Release date:2019-09-25
Last modified:2020-04-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of a beta-trefoil lectin from Entamoeba histolytica in monomeric and a novel disulphide bond-mediated dimeric forms.
Glycobiology, 2020
6IFB
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BU of 6ifb by Molmil
Structure of rhamnose bound beta-trefoil lectin from Entamoeba histolytica
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, beta-L-rhamnopyranose, ...
Authors:Suguna, K, Khan, F.
Deposit date:2018-09-19
Release date:2019-09-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structures of a beta-trefoil lectin from Entamoeba histolytica in monomeric and a novel disulfide bond-mediated dimeric forms.
Glycobiology, 30, 2020
6INU
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BU of 6inu by Molmil
Crystal structure of the CysR-CTLD2 fragment of human MR at acidic pH (pH 4.6)
Descriptor: Macrophage mannose receptor 1
Authors:Hu, Z, He, Y.
Deposit date:2018-10-27
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of the pH-dependent conformational change of the N-terminal region of human mannose receptor/CD206.
J.Struct.Biol., 208, 2019
6INN
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BU of 6inn by Molmil
Crystal structure of the CysR-CTLD3 fragment of human MR at acidic pH (pH 5.6)
Descriptor: Macrophage mannose receptor 1
Authors:Hu, Z, He, Y.
Deposit date:2018-10-26
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Structural basis of the pH-dependent conformational change of the N-terminal region of human mannose receptor/CD206.
J.Struct.Biol., 208, 2019
6INV
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BU of 6inv by Molmil
Crystal structure of the CysR-CTLD2 fragment of human MR at acidic pH (pH 4.0)
Descriptor: Macrophage mannose receptor 1
Authors:Hu, Z, He, Y.
Deposit date:2018-10-27
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of the pH-dependent conformational change of the N-terminal region of human mannose receptor/CD206.
J.Struct.Biol., 208, 2019
6IOE
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BU of 6ioe by Molmil
Crystal structure of the CysR-CTLD2 fragment of human MR at basic pH (pH 8.5)
Descriptor: Macrophage mannose receptor 1
Authors:Hu, Z, He, Y.
Deposit date:2018-10-30
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of the pH-dependent conformational change of the N-terminal region of human mannose receptor/CD206.
J.Struct.Biol., 208, 2019
6INO
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BU of 6ino by Molmil
Crystal structure of the CysR-CTLD2 fragment of human MR at acidic pH (pH 4.6)
Descriptor: Macrophage mannose receptor 1
Authors:Hu, Z, He, Y.
Deposit date:2018-10-26
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.054 Å)
Cite:Structural basis of the pH-dependent conformational change of the N-terminal region of human mannose receptor/CD206.
J.Struct.Biol., 208, 2019
6IWR
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BU of 6iwr by Molmil
Crystal structure of GalNAc-T7 with UDP, GalNAc and Mn2+
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, N-acetylgalactosaminyltransferase 7, ...
Authors:Yu, C, Yin, Y.X.
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structural basis of carbohydrate transfer activity of UDP-GalNAc: Polypeptide N-acetylgalactosaminyltransferase 7.
Biochem. Biophys. Res. Commun., 510, 2019
6IWQ
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BU of 6iwq by Molmil
Crystal structure of GalNAc-T7 with Mn2+
Descriptor: MANGANESE (II) ION, N-acetylgalactosaminyltransferase 7
Authors:Yu, C, Yin, Y.X.
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis of carbohydrate transfer activity of UDP-GalNAc: Polypeptide N-acetylgalactosaminyltransferase 7.
Biochem. Biophys. Res. Commun., 510, 2019

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PDB entries from 2024-03-27

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