1D8Y
  • Download 1d8y
  • View 1d8y
Molmil generated image of 1d8y
CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA
Descriptor:DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX
Authors:Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.
Deposit date:1999-10-26
Release date:1999-12-02
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural origins of the exonuclease resistance of a zwitterionic RNA.
Proc.Natl.Acad.Sci.USA, 96, 1999
1D9D
  • Download 1d9d
  • View 1d9d
Molmil generated image of 1d9d
CRYSTALL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH SHORT DNA FRAGMENT CARRYING 2'-0-AMINOPROPYL-RNA MODIFICATIONS 5'-D(TCG)-AP(AUC)-3'
Descriptor:DNA POLYMERASE I (E.C.2.7.7.7 )/DNA-RNA COMPLEX
Authors:Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.
Deposit date:1999-10-27
Release date:1999-12-02
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural origins of the exonuclease resistance of a zwitterionic RNA.
Proc.Natl.Acad.Sci.USA, 96, 1999
1D9F
  • Download 1d9f
  • View 1d9f
Molmil generated image of 1d9f
CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA TETRAMER CARRYING 2'-O-(3-AMINOPROPYL)-RNA MODIFICATION 5'-D(TT)-AP(U)-D(T)-3'
Descriptor:DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX
Authors:Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.
Deposit date:1999-10-27
Release date:1999-12-02
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural origins of the exonuclease resistance of a zwitterionic RNA.
Proc.Natl.Acad.Sci.USA, 96, 1999
1DPI
  • Download 1dpi
  • View 1dpi
Molmil generated image of 1dpi
STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP
Descriptor:DNA POLYMERASE I (KLENOW FRAGMENT) (E.C.2.7.7.7)-D/CMP COMPLEX
Authors:Beese, L., Ollis, D., Steitz, T.
Deposit date:1987-08-11
Release date:1987-10-16
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP.
Nature, 313, 1985
1KFD
  • Download 1kfd
  • View 1kfd
Molmil generated image of 1kfd
CRYSTAL STRUCTURES OF THE KLENOW FRAGMENT OF DNA POLYMERASE I COMPLEXED WITH DEOXYNUCLEOSIDE TRIPHOSPHATE AND PYROPHOSPHATE
Descriptor:DNA POLYMERASE I (KLENOW FRAGMENT) (E.C.2.7.7.7) COMPLEXED WITH DCTP
Authors:Beese, L.S., Friedman, J.M., Steitz, T.A.
Deposit date:1993-09-23
Release date:1994-06-22
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Crystal structures of the Klenow fragment of DNA polymerase I complexed with deoxynucleoside triphosphate and pyrophosphate.
Biochemistry, 32, 1993
1KFS
  • Download 1kfs
  • View 1kfs
Molmil generated image of 1kfs
DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Descriptor:DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Authors:Brautigam, C.A., Steitz, T.A.
Deposit date:1997-08-18
Release date:1998-02-25
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural principles for the inhibition of the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates.
J.Mol.Biol., 277, 1998
1KLN
  • Download 1kln
  • View 1kln
Molmil generated image of 1kln
DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Descriptor:DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Authors:Beese, L.S., Derbyshire, V., Steitz, T.A.
Deposit date:1994-05-24
Release date:1994-11-30
Modification date:2009-10-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of DNA polymerase I Klenow fragment bound to duplex DNA.
Science, 260, 1993
1KRP
  • Download 1krp
  • View 1krp
Molmil generated image of 1krp
DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Descriptor:DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Authors:Brautigam, C.A., Steitz, T.A.
Deposit date:1997-08-19
Release date:1998-02-25
Modification date:2009-10-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural principles for the inhibition of the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates.
J.Mol.Biol., 277, 1998
1KSP
  • Download 1ksp
  • View 1ksp
Molmil generated image of 1ksp
DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Descriptor:DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Authors:Brautigam, C.A., Steitz, T.A.
Deposit date:1997-08-19
Release date:1998-02-25
Modification date:2009-10-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural principles for the inhibition of the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates.
J.Mol.Biol., 277, 1998
1NJW
  • Download 1njw
  • View 1njw
Molmil generated image of 1njw
GUANINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Descriptor:DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex
Authors:Johnson, S.J., Beese, L.S.
Deposit date:2003-01-02
Release date:2004-03-30
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of mismatch replication errors observed in a DNA polymerase.
Cell(Cambridge,Mass.), 116, 2004
1QSL
  • Download 1qsl
  • View 1qsl
Molmil generated image of 1qsl
KLENOW FRAGMENT COMPLEXED WITH SINGLE-STRANDED SUBSTRATE AND EUROPIUM (III) ION
Descriptor:KLENOW FRAGMENT OF DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX
Authors:Brautigam, C.A., Aschheim, K., Steitz, T.A.
Deposit date:1999-06-22
Release date:1999-06-30
Modification date:2011-04-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural elucidation of the binding and inhibitory properties of lanthanide (III) ions at the 3'-5' exonucleolytic active site of the Klenow fragment
Chem.Biol., 6, 1999
1SKR
  • Download 1skr
  • View 1skr
Molmil generated image of 1skr
T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE AND DDATP
Descriptor:DNA polymerase (E.C.2.7.7.7)/Thioredoxin 1/DNA Complex
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SKS
  • Download 1sks
  • View 1sks
Molmil generated image of 1sks
BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE
Descriptor:DNA POLYMERASE(E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SKW
  • Download 1skw
  • View 1skw
Molmil generated image of 1skw
BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE
Descriptor:DNA POLYMERASE (E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SL0
  • Download 1sl0
  • View 1sl0
Molmil generated image of 1sl0
TERNARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
Descriptor:DNA POLYMERASE(E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SL1
  • Download 1sl1
  • View 1sl1
Molmil generated image of 1sl1
BINARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE
Descriptor:DNA POLYMERASE (E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1SL2
  • Download 1sl2
  • View 1sl2
Molmil generated image of 1sl2
TERNARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
Descriptor:DNA POLYMERASE (E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Li, Y., Dutta, S., Doublie, S., Bdour, H.M., Taylor, J.S., Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1T7P
  • Download 1t7p
  • View 1t7p
Molmil generated image of 1t7p
T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE,A NUCLEOSIDE TRIPHOSPHATE, AND ITS PROCESSIVITY FACTOR THIOREDOXIN
Descriptor:DNA POLYMERASE, THIOREDOXIN/DNA COMPLEX, 2'-3'DIDEOXYGUANOSINE-5'-TRIPHOSPHATE
Authors:Doublie, S., Tabor, S., Long, A.M., Richardson, C.C., Ellenberger, T.
Deposit date:1997-09-24
Release date:1998-02-25
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution.
Nature, 391, 1998
1T8E
  • Download 1t8e
  • View 1t8e
Molmil generated image of 1t8e
T7 DNA POLYMERASE TERNARY COMPLEX WITH DCTP AT THE INSERTION SITE.
Descriptor:DNA polymerase (E.C.2.7.7.7)/thioredoxin 1/DNA Complex
Authors:Brieba, L.G., Eichman, B.F., Kokoska, R.J., Doublie, S., Kunkel, T.A., Ellenberger, T.
Deposit date:2004-05-12
Release date:2004-10-12
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.
Embo J., 23, 2004
1TK0
  • Download 1tk0
  • View 1tk0
Molmil generated image of 1tk0
T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DDCTP AT THE INSERTION SITE
Descriptor:DNA POLYMERASE (E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Brieba, L.G., Eichman, B.F., Kokoska, R.J., Doublie, S., Kunkel, T.A., Ellenberger, T.
Deposit date:2004-06-07
Release date:2004-08-31
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.
Embo J., 23, 2004
1TK5
  • Download 1tk5
  • View 1tk5
Molmil generated image of 1tk5
T7 DNA POLYMERASE BINARY COMPLEX WITH 8 OXO GUANOSINE IN THE TEMPLATING STRAND
Descriptor:DNA POLYMERASE (2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Brieba, L.G., Eichman, B.F., Kokoska, R.J., Doublie, S., Kunkel, T.A., Ellenberger, T.
Deposit date:2004-06-08
Release date:2004-08-31
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.
Embo J., 23, 2004
1TK8
  • Download 1tk8
  • View 1tk8
Molmil generated image of 1tk8
T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DAMP AT THE ELONGATION SITE
Descriptor:DNA POLYMERASE (E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Brieba, L.G., Eichman, B.F., Kokoska, R.J., Doublie, S., Kunkel, T.A., Ellenberger, T.
Deposit date:2004-06-08
Release date:2004-08-31
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.
Embo J., 23, 2004
1TKD
  • Download 1tkd
  • View 1tkd
Molmil generated image of 1tkd
T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DCMP AT THE ELONGATION SITE
Descriptor:DNA POLYMERASE (E.C.2.7.7.7)/THIOREDOXIN 1/DNA Complex
Authors:Brieba, L.G., Eichman, B.F., Kokoska, R.J., Doublie, S., Kunkel, T.A., Ellenberger, T.
Deposit date:2004-06-08
Release date:2004-08-31
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.
Embo J., 23, 2004
1UA0
  • Download 1ua0
  • View 1ua0
Molmil generated image of 1ua0
AMINOFLUORENE DNA ADDUCT AT THE PRE-INSERTION SITE OF A DNA POLYMERASE
Descriptor:DNA polymerase I (E.C.2.7.7.7)/DNA Complex
Authors:Hsu, G.W., Kiefer, J.R., Becherel, O.J., Fuchs, R.P.P., Beese, L.S.
Deposit date:2004-08-11
Release date:2004-09-28
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase
J.Biol.Chem., 279, 2004
1X9M
  • Download 1x9m
  • View 1x9m
Molmil generated image of 1x9m
T7 DNA POLYMERASE IN COMPLEX WITH AN N-2-ACETYLAMINOFLUORENE-ADDUCTED DNA
Descriptor:DNA polymerase (E.C.2.7.7.7)/ Thioredoxin 1/DNA Complex
Authors:Dutta, S., Li, Y., Johnson, D., Dzantiev, L., Richardson, C.C., Romano, L.J., Ellenberger, T.
Deposit date:2004-08-23
Release date:2004-10-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Proc.Natl.Acad.Sci.USA, 101, 2004
<123>
Copyright © 2013-2016 Protein Data Bank Japan
This is the static version of the PDBj web interface with limited functionality. Try the full version instead.