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1QF9
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1qf9
PH INFLUENCES FLUORIDE COORDINATION NUMBER OF THE ALFX PHOSPHORYL TRANSFER TRANSITION STATE ANALOG IN UMP/CMP KINASE
Descriptor:URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE
Authors:Schlichting, I., Reinstein, J.
Deposit date:1999-04-07
Release date:1999-08-16
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:pH influences fluoride coordination number of the AlFx phosphoryl transfer transition state analog.
Nat.Struct.Biol., 6, 1999
1TEV
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1tev
CRYSTAL STRUCTURE OF THE HUMAN UMP/CMP KINASE IN OPEN CONFORMATION
Descriptor:UMP-CMP kinase
Authors:Segura-Pena, D., Sekulic, N., Ort, S., Konrad, M., Lavie, A.
Deposit date:2004-05-25
Release date:2004-06-22
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate-induced Conformational Changes in Human UMP/CMP Kinase.
J.Biol.Chem., 279, 2004
1UKE
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1uke
UMP/CMP KINASE FROM SLIME MOLD
Descriptor:URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE, P1-(ADENOSINE-5'-P5-(URIDINE-5')PENTAPHOSPHATE
Authors:Scheffzek, K., Kliche, W., Wiesmueller, L., Reinstein, J.
Deposit date:1998-01-07
Release date:1998-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the complex of UMP/CMP kinase from Dictyostelium discoideum and the bisubstrate inhibitor P1-(5'-adenosyl) P5-(5'-uridyl) pentaphosphate (UP5A) and Mg2+ at 2.2 A: implications for water-mediated specificity.
Biochemistry, 35, 1996
1UKY
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1uky
SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE
Descriptor:URIDYLATE KINASE (E.C.2.7.4.-) COMPLEXED WITH TWO ADP MOLECULES
Authors:Mueller-Dieckmann, H.-J., Schulz, G.E.
Deposit date:1994-07-13
Release date:1995-01-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Substrate specificity and assembly of the catalytic center derived from two structures of ligated uridylate kinase.
J.Mol.Biol., 246, 1995
1UKZ
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1ukz
SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE
Descriptor:URIDYLATE KINASE (E.C.2.7.4.-) COMPLEXED WITH ADP AND AMP
Authors:Mueller-Dieckmann, H.-J., Schulz, G.E.
Deposit date:1994-07-13
Release date:1995-01-26
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate specificity and assembly of the catalytic center derived from two structures of ligated uridylate kinase.
J.Mol.Biol., 246, 1995
1Z83
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1z83
CRYSTAL STRUCTURE OF HUMAN AK1A IN COMPLEX WITH AP5A
Descriptor:Adenylate kinase isoenzyme 1 (E.C.2.7.4.3)
Authors:Filippakopoulos, P., Bunkoczi, G., Jansson, A., Schreurs, A., Knapp, S., Edwards, A., Von Delft, F., Sundstrom, M., Structural Genomics Consortium (SGC)
Deposit date:2005-03-29
Release date:2005-04-26
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human AK1A in complex with AP5A
To be Published
2BWJ
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2bwj
STRUCTURE OF ADENYLATE KINASE 5
Descriptor:ADENYLATE KINASE 5 (E.C.2.7.4.3)
Authors:Bunkoczi, G., Filippakopoulos, P., Fedorov, O., Jansson, A., Longman, E., Ugochukwu, E., Knapp, S., Von Delft, F., Arrowsmith, C., Edwards, A., Sundstrom, M., Weigelt, J.
Deposit date:2005-07-14
Release date:2005-07-21
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Adenylate Kinase 5
To be Published
2C95
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2c95
STRUCTURE OF ADENYLATE KINASE 1 IN COMPLEX WITH P1,P4-DI (ADENOSINE)TETRAPHOSPHATE
Descriptor:ADENYLATE KINASE 1 (E.C.2.7.4.3)
Authors:Bunkoczi, G., Filippakopoulos, P., Jansson, A., Longman, E., Von Delft, F., Edwards, A., Arrowsmith, C., Sundstrom, M., Knapp, S.
Deposit date:2005-12-09
Release date:2007-02-20
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure of Adenylate Kinase 1 in Complex with P1, P4-Di(Adenosine)Tetraphosphate
To be Published
2RGX
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2rgx
CRYSTAL STRUCTURE OF ADENYLATE KINASE FROM AQUIFEX AEOLICUS IN COMPLEX WITH AP5A
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Thai, V., Wolf-Watz, M., Fenn, T, Pozharski, E., Wilson, M.A., Petsko, G.A., Kern, D.
Deposit date:2007-10-05
Release date:2007-12-18
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Intrinsic motions along an enzymatic reaction trajectory.
Nature, 450, 2007
2RH5
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2rh5
STRUCTURE OF APO ADENYLATE KINASE FROM AQUIFEX AEOLICUS
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Thai, V., Wolf-Watz, M., Fenn, T, Pozharski, E., Wilson, M.A., Petsko, G.A., Kern, D.
Deposit date:2007-10-05
Release date:2007-12-18
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Intrinsic motions along an enzymatic reaction trajectory.
Nature, 450, 2007
2UKD
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2ukd
UMP/CMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP
Descriptor:URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE, ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE
Authors:Schlichting, I., Reinstein, J.
Deposit date:1997-05-20
Release date:1998-05-20
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of active conformations of UMP kinase from Dictyostelium discoideum suggest phosphoryl transfer is associative.
Biochemistry, 36, 1997
2XB4
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2xb4
CRYSTAL STRUCTURES OF ZINC CONTAINING ADENYLATE KINASE FROM DESULFOVIBRIO GIGAS
Descriptor:ADENYLATE KINASE (E.C.2.7.4.3)
Authors:Mukhopadhyay, A., Kladova, A.V., Gavel, O.Y., Calvete, J.J., Shnyrov, V.L., Moura, I., Moura, J.J.G., Bursakov, S.A., Romao, M.J., Trincao, J.
Deposit date:2010-04-05
Release date:2010-09-22
Modification date:2011-09-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Zinc-, Cobalt-, and Iron-Containing Adenylate Kinase from Desulfovibrio Gigas: A Novel Metal-Containing Adenylate Kinase from Gram-Negative Bacteria.
J.Biol.Inorg.Chem., 16, 2011
3ADK
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3adk
REFINED STRUCTURE OF PORCINE CYTOSOLIC ADENYLATE KINASE AT 2.1 ANGSTROMS RESOLUTION
Descriptor:ADENYLATE KINASE (E.C.2.7.4.3)
Authors:Schulz, G.E.
Deposit date:1987-11-19
Release date:1988-01-16
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Refined structure of porcine cytosolic adenylate kinase at 2.1 A resolution.
J.Mol.Biol., 199, 1988
3CM0
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3cm0
CRYSTAL STRUCTURE OF ADENYLATE KINASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Nakagawa, N., Kondo, N., Masui, R., Matsuda, Z., Iwamoto, I., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-03-20
Release date:2008-09-23
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of adenylate kinase from Thermus thermophilus HB8
To be Published
3L0P
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3l0p
CRYSTAL STRUCTURES OF IRON CONTAINING ADENYLATE KINASE FROM DESULFOVIBRIO GIGAS
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Mukhopadhyay, A., Trincao, J., Romao, M.J.
Deposit date:2009-12-10
Release date:2010-12-15
Modification date:2014-02-12
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria
J.Biol.Inorg.Chem., 16, 2011
3L0S
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3l0s
CRYSTAL STRUCTURES OF ZINC, COBALT AND IRON CONTAINING ADENYLATE KINASE FROM GRAM-NEGATIVE BACTERIA DESULFOVIBRIO GIGAS
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Mukhopadhyay, A., Trincao, J., Romao, M.J.
Deposit date:2009-12-10
Release date:2010-12-15
Modification date:2014-02-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria
J.Biol.Inorg.Chem., 16, 2011
3SR0
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3sr0
CRYSTAL STRUCTURE OF THE PHOSPHORYL TRANSFER TRANSITION STATE MIMIC IN THE ADENYLATE KINASE: ADP/ALF4/AMP IN THE ACTIVE SITE
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Cho, Y.-J., Kern, D.
Deposit date:2011-07-06
Release date:2012-10-10
Modification date:2015-02-18
Method:X-RAY DIFFRACTION (1.565 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
3UKD
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3ukd
UMP/CMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP, AND ALF3
Descriptor:URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE, ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE, ALUMINUM FLUORIDE
Authors:Schlichting, I., Reinstein, J.
Deposit date:1997-05-20
Release date:1998-05-20
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of active conformations of UMP kinase from Dictyostelium discoideum suggest phosphoryl transfer is associative.
Biochemistry, 36, 1997
3UMF
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3umf
SCHISTOSOMA MANSONI ADENYLATE KINASE
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Marques, I., DeMarco, R., Pereira, H.M.
Deposit date:2011-11-13
Release date:2012-09-26
Modification date:2012-10-17
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Structural and kinetic studies of Schistosoma mansoni adenylate kinases.
Mol.Biochem.Parasitol., 185, 2012
4CF7
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4cf7
CRYSTAL STRUCTURE OF ADENYLATE KINASE FROM AQUIFEX AEOLICUS WITH MGADP BOUND
Descriptor:ADENYLATE KINASE (E.C.2.7.4.3)
Authors:Kerns, S.J., Agafonov, R.V., Cho, Y.-J., Pontiggia, F., Otten, R., Pachov, D.V., Kutter, S., Phung, L.A., Murphy, P.N., Thai, V., Hagan, M.F., Kern, D.
Deposit date:2013-11-13
Release date:2014-12-03
Modification date:2015-02-18
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:The Energy Landscape of Adenylate Kinase During Catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4IKE
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4ike
CRYSTAL STRUCTURE OF A PARTLY OPEN ATP-LID OF LIGANDED ADENYLATE KINASE
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Cho, Y.-J., Kern, D.
Deposit date:2012-12-26
Release date:2014-07-02
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:The ATP-Lid Opened Adenylate Kinase with Fully Occupied Substrates
To be Published
4JKY
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4jky
COBALT BETWEEN TWO ADP'S IN THE ACTIVE SITE OF ADENYLATE KINASE
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Cho, Y.-J., Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Modification date:2015-02-18
Method:X-RAY DIFFRACTION (2.373 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL5
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4jl5
A HIGH RESOLUTION STRUCTURE OF AQUIFEX ADENYLATE KINASE WITH 2 ADP'S
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Cho, Y.-J., Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Modification date:2015-02-18
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL6
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4jl6
CRYSTAL STRUCTURE OF ADENYLATE KINASE WITH 2 ADP'S
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Cho, Y.-J., Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Modification date:2015-02-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL8
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4jl8
A VARIOUS KINDS OF ADP CONFORMATIONS IN THE ADENYLATE KINASE ACTIVE SITE
Descriptor:Adenylate kinase (E.C.2.7.4.3)
Authors:Cho, Y.-J., Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Modification date:2015-02-18
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
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entries available on 2015-04-22
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