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1CC1
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1cc1
CRYSTAL STRUCTURE OF A REDUCED, ACTIVE FORM OF THE NI-FE-SE HYDROGENASE FROM DESULFOMICROBIUM BACULATUM
Descriptor:HYDROGENASE (E.C.1.18.99.1)
Authors:Garcin, E., Vernede, X., Hatchikian, E.C., Volbeda, A., Frey, M., Fontecilla-Camps, J.C.
Deposit date:1999-03-03
Release date:1999-06-01
Modification date:2014-08-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The crystal structure of a reduced [NiFeSe] hydrogenase provides an image of the activated catalytic center
Structure Fold.Des., 7, 1999
1FRF
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1frf
CRYSTAL STRUCTURE OF THE NI-FE HYDROGENASE FROM DESULFOVIBRIO FRUCTOSOVORANS
Descriptor:[NI-FE] HYDROGENASE (E.C.1.18.99.1)
Authors:Montet, Y., Volbeda, A., Piras, C., Hatchikian, E.C., Frey, M., Fontecilla, J.C.
Deposit date:1998-07-21
Release date:1998-07-29
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:3Fe-4S] to [4Fe-4S] cluster conversion in Desulfovibrio fructosovorans [NiFe] hydrogenase by site-directed mutagenesis
Proc.Natl.Acad.Sci.USA, 95, 1998
1H2A
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1h2a
SINGLE CRYSTALS OF HYDROGENASE FROM DESULFOVIBRIO VULGARIS
Descriptor:HYDROGENASE, IRON/SULFUR CLUSTER, FE3-S4 CLUSTER, NI-FE ACTIVE CENTER
Authors:Higuchi, Y., Yasuoka, N.
Deposit date:1997-10-17
Release date:1999-02-09
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unusual ligand structure in Ni-Fe active center and an additional Mg site in hydrogenase revealed by high resolution X-ray structure analysis.
Structure, 5, 1997
1H2R
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1h2r
THREE-DIMENSIONAL STRUCTURE OF NI-FE HYDROGENASE FROM DESULFIVIBRIO VULGARIS MIYAZAKI F IN THE REDUCED FORM AT 1.4 A RESOLUTION
Descriptor:PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT) (1.12.2.1)
Authors:Higuchi, Y., Ogata, H.
Deposit date:1999-06-14
Release date:2000-01-05
Modification date:2009-03-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Removal of the bridging ligand atom at the Ni-Fe active site of [NiFe] hydrogenase upon reduction with H2, as revealed by X-ray structure analysis at 1.4 A resolution.
Structure Fold.Des., 7, 1999
1UBH
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1ubh
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBJ
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1ubj
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBK
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1ubk
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBL
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1ubl
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBM
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1ubm
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBO
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1ubo
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBR
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1ubr
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBT
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1ubt
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1UBU
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1ubu
THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEX OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Mizoguchi, Y., Mizuno, N., Miki, K., Adachi, S., Yasuoka, N., Yagi, T., Yamauchi, O., Hirota, S., Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Modification date:2014-04-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002
1WUH
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1wuh
THREE-DIMENSIONAL STRUCTURE OF THE NI-A STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Hirota, S., Nakahara, A., Komori, H., Shibata, N., Kato, T., Kano, K., Higuchi, Y.
Deposit date:2004-12-07
Release date:2005-12-07
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Structural basis for the activation process of [NiFe] hydrogenase from D.vulgaris Miyazaki F
To be Published
1WUI
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1wui
ULTRA-HIGH RESOLUTION STRUCTURE OF THE NI-A STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit (E.C.1.12.2.1), Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Hirota, S., Nakahara, A., Komori, H., Shibata, N., Kato, T., Kano, K., Higuchi, Y.
Deposit date:2004-12-07
Release date:2005-12-07
Modification date:2008-06-24
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
1WUJ
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1wuj
THREE-DIMENSIONAL STRUCTURE OF THE NI-B STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit (E.C.1.12.2.1), Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Hirota, S., Nakahara, A., Komori, H., Shibata, N., Kato, T., Kano, K., Higuchi, Y.
Deposit date:2004-12-07
Release date:2005-12-07
Modification date:2008-06-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
1WUK
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1wuk
HIGH RESOLUTION STRUCTURE OF THE OXIDIZED STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Hirota, S., Nakahara, A., Komori, H., Shibata, N., Kato, T., Kano, K., Higuchi, Y.
Deposit date:2004-12-07
Release date:2005-12-07
Modification date:2008-06-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
1WUL
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1wul
HIGH RESOLUTION STRUCTURE OF THE REDUCED STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Descriptor:Periplasmic [NiFe] hydrogenase small subunit/Periplasmic [NiFe] hydrogenase large subunit (E.C.1.12.2.1)
Authors:Ogata, H., Hirota, S., Nakahara, A., Komori, H., Shibata, N., Kato, T., Kano, K., Higuchi, Y.
Deposit date:2004-12-07
Release date:2005-12-07
Modification date:2008-06-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state
Structure, 13, 2005
3AYX
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3ayx
MEMBRANE-BOUND RESPIRATORY [NIFE] HYDROGENASE FROM HYDROGENOVIBRIO MARINUS IN AN H2-REDUCED CONDITION
Descriptor:Membrane-bound hydrogenase large subunit (E.C.1.12.5.1), Membrane-bound hydrogenase small subunit (E.C.1.12.5.1)
Authors:Shomura, Y., Yoon, K.S., Nishihara, H., Higuchi, Y.
Deposit date:2011-05-20
Release date:2011-10-12
Modification date:2011-11-23
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase
Nature, 479, 2011
3AYY
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3ayy
MEMBRANE-BOUND RESPIRATORY [NIFE] HYDROGENASE FROM HYDROGENOVIBRIO MARINUS IN A FERRICYANIDE-OXIDIZED CONDITION
Descriptor:Membrane-bound hydrogenase large subunit (E.C.1.12.5.1), Membrane-bound hydrogenase small subunit (E.C.1.12.5.1)
Authors:Shomura, Y., Yoon, K.S., Nishihara, H., Higuchi, Y.
Deposit date:2011-05-20
Release date:2011-10-12
Modification date:2011-11-23
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase
Nature, 479, 2011
3AYZ
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3ayz
MEMBRANE-BOUND RESPIRATORY [NIFE] HYDROGENASE FROM HYDROGENOVIBRIO MARINUS IN AN AIR-OXIDIZED CONDITION
Descriptor:Membrane-bound hydrogenase large subunit (E.C.1.12.5.1), Membrane-bound hydrogenase small subunit (E.C.1.12.5.1)
Authors:Shomura, Y., Yoon, K.S., Nishihara, H., Higuchi, Y.
Deposit date:2011-05-20
Release date:2011-10-12
Modification date:2011-11-23
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase
Nature, 479, 2011
3RGW
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3rgw
CRYSTAL STRUCTURE AT 1.5 A RESOLUTION OF AN H2-REDUCED, O2-TOLERANT HYDROGENASE FROM RALSTONIA EUTROPHA UNMASKS A NOVEL IRON-SULFUR CLUSTER
Descriptor:Uptake hydrogenase large subunit (E.C.1.12.99.6), Uptake hydrogenase small subunit (E.C.1.12.99.6)
Authors:Scheerer, P., Fritsch, J., Frielingsdorf, S., Kroschinsky, S., Friedrich, B., Lenz, O., Spahn, C.M.T.
Deposit date:2011-04-10
Release date:2011-10-26
Modification date:2011-11-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of an oxygen-tolerant hydrogenase uncovers a novel iron-sulphur centre.
Nature, 479, 2011
3UQY
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3uqy
H2-REDUCED STRUCTURE OF E. COLI HYDROGENASE-1
Descriptor:Hydrogenase-1 small chain (E.C.1.12.99.6), Hydrogenase-1 large chain (E.C.1.12.99.6)
Authors:Volbeda, A., Fontecilla-Camps, J.C., Darnault, C.
Deposit date:2011-11-21
Release date:2012-03-28
Modification date:2012-04-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:X-ray crystallographic and computational studies of the O2-tolerant [NiFe]-hydrogenase 1 from Escherichia coli.
Proc.Natl.Acad.Sci.USA, 109, 2012
3USC
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3usc
CRYSTAL STRUCTURE OF E. COLI HYDROGENASE-1 IN A FERRICYANIDE-OXIDIZED FORM
Descriptor:Hydrogenase-1 small chain (E.C.1.12.99.6), Hydrogenase-1 large chain (E.C.1.12.99.6)
Authors:Volbeda, A., Fontecilla-Camps, J.C., Darnault, C.
Deposit date:2011-11-23
Release date:2012-03-28
Modification date:2012-04-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystallographic and computational studies of the O2-tolerant [NiFe]-hydrogenase 1 from Escherichia coli.
Proc.Natl.Acad.Sci.USA, 109, 2012
3USE
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3use
CRYSTAL STRUCTURE OF E. COLI HYDROGENASE-1 IN ITS AS-ISOLATED FORM
Descriptor:Hydrogenase-1 small chain (E.C.1.12.99.6), Hydrogenase-1 large chain (E.C.1.12.99.6)
Authors:Volbeda, A., Fontecilla-Camps, J.C., Darnault, C.
Deposit date:2011-11-23
Release date:2012-03-28
Modification date:2012-04-18
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:X-ray crystallographic and computational studies of the O2-tolerant [NiFe]-hydrogenase 1 from Escherichia coli.
Proc.Natl.Acad.Sci.USA, 109, 2012
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