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1AAR
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BU of 1aar by Molmil
STRUCTURE OF A DIUBIQUITIN CONJUGATE AND A MODEL FOR INTERACTION WITH UBIQUITIN CONJUGATING ENZYME (E2)
Descriptor: DI-UBIQUITIN
Authors:Cook, W.J, Jeffrey, L.C, Carson, M, Chen, Z, Pickart, C.M.
Deposit date:1992-04-17
Release date:1993-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a diubiquitin conjugate and a model for interaction with ubiquitin conjugating enzyme (E2).
J.Biol.Chem., 267, 1992
1BT0
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BU of 1bt0 by Molmil
STRUCTURE OF UBIQUITIN-LIKE PROTEIN, RUB1
Descriptor: 1,2-ETHANEDIOL, PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1), ...
Authors:Delacruz, W.P, Fisher, A.J.
Deposit date:1998-09-02
Release date:1998-12-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The rub family of ubiquitin-like proteins. Crystal structure of Arabidopsis rub1 and expression of multiple rubs in Arabidopsis.
J.Biol.Chem., 273, 1998
1C3T
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BU of 1c3t by Molmil
ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY
Descriptor: PROTEIN (1D8 UBIQUITIN)
Authors:Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M.
Deposit date:1999-07-28
Release date:1999-08-20
Last modified:2018-03-14
Method:SOLUTION NMR
Cite:Rotamer strain as a determinant of protein structural specificity.
Protein Sci., 8, 1999
1CMX
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BU of 1cmx by Molmil
STRUCTURAL BASIS FOR THE SPECIFICITY OF UBIQUITIN C-TERMINAL HYDROLASES
Descriptor: PROTEIN (UBIQUITIN YUH1-UBAL)
Authors:Johnston, S.C, Riddle, S.M, Cohen, R.E, Hill, C.P.
Deposit date:1999-05-12
Release date:1999-07-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the specificity of ubiquitin C-terminal hydrolases.
EMBO J., 18, 1999
1D3Z
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BU of 1d3z by Molmil
UBIQUITIN NMR STRUCTURE
Descriptor: PROTEIN (UBIQUITIN)
Authors:Cornilescu, G, Marquardt, J.L, Ottiger, M, Bax, A.
Deposit date:1999-10-01
Release date:1999-10-14
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase
J.Am.Chem.Soc., 120, 1998
1EUV
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BU of 1euv by Molmil
X-RAY STRUCTURE OF THE C-TERMINAL ULP1 PROTEASE DOMAIN IN COMPLEX WITH SMT3, THE YEAST ORTHOLOG OF SUMO.
Descriptor: UBITQUTIN-LIKE PROTEIN SMT3, ULP1 PROTEASE
Authors:Mossessova, E, Lima, C.D.
Deposit date:2000-04-17
Release date:2000-06-07
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ulp1-SUMO crystal structure and genetic analysis reveal conserved interactions and a regulatory element essential for cell growth in yeast.
Mol.Cell, 5, 2000
1F9J
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BU of 1f9j by Molmil
STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN
Descriptor: TETRAUBIQUITIN
Authors:Phillips, C.L, Thrower, J, Pickart, C.M, Hill, C.P.
Deposit date:2000-07-10
Release date:2001-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of a new crystal form of tetraubiquitin.
Acta Crystallogr.,Sect.D, 57, 2001
1FXT
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BU of 1fxt by Molmil
STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTER COMPLEX
Descriptor: UBIQUITIN, UBIQUITIN-CONJUGATING ENZYME E2-24 KDA
Authors:Hamilton, K.S, Shaw, G.S, Williams, R.S, Huzil, J.T, McKenna, S, Ptak, C, Glover, M, Ellison, M.J.
Deposit date:2000-09-26
Release date:2001-10-10
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of a conjugating enzyme-ubiquitin thiolester intermediate reveals a novel role for the ubiquitin tail.
Structure, 9, 2001
1G6J
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STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLES
Descriptor: UBIQUITIN
Authors:Babu, C.R, Flynn, P.F, Wand, A.J.
Deposit date:2000-11-06
Release date:2001-03-28
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Validation of protein structure from preparations of encapsulated proteins dissolved in low viscosity fluids.
J.Am.Chem.Soc., 123, 2001
1GJZ
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Solution structure of a dimeric N-terminal fragment of human ubiquitin
Descriptor: UBIQUITIN
Authors:Bolton, D, Evans, P.A, Stott, K, Broadhurst, R.W.
Deposit date:2001-08-06
Release date:2001-12-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure and Properties of a Dimeric N-Terminal Fragment of Human Ubiquitin.
J.Mol.Biol., 314, 2001
1IYF
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BU of 1iyf by Molmil
Solution structure of ubiquitin-like domain of human parkin
Descriptor: parkin
Authors:Sakata, E, Yamaguchi, Y, Kurimoto, E, Kikuchi, J, Yokoyama, S, Kawahara, H, Yokosawa, H, Hattori, N, Mizuno, Y, Tanaka, K, Kato, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-08-13
Release date:2003-03-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain
EMBO REP., 4, 2003
1J8C
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BU of 1j8c by Molmil
Solution Structure of the Ubiquitin-like Domain of hPLIC-2
Descriptor: ubiquitin-like protein hPLIC-2
Authors:Walters, K.J, Kleijnen, M.F, Goh, A.M, Wagner, G, Howley, P.M.
Deposit date:2001-05-21
Release date:2002-03-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a.
Biochemistry, 41, 2002
1L2N
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Smt3 Solution Structure
Descriptor: Ubiquitin-like protein SMT3
Authors:Sheng, W, Liao, X.
Deposit date:2002-02-22
Release date:2002-03-06
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of a yeast ubiquitin-like protein Smt3: the role of structurally less defined sequences in protein-protein recognitions.
Protein Sci., 11, 2002
1LM8
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BU of 1lm8 by Molmil
Structure of a HIF-1a-pVHL-ElonginB-ElonginC Complex
Descriptor: ELONGIN B, ELONGIN C, Hypoxia-inducible factor 1 alpha, ...
Authors:Min, J.-H, Yang, H, Ivan, M, Gertler, F, Kaelin JR, W.G, Pavletich, N.P.
Deposit date:2002-04-30
Release date:2002-06-12
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of an HIF-1alpha -pVHL complex: hydroxyproline recognition in signaling.
Science, 296, 2002
1LQB
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BU of 1lqb by Molmil
Crystal structure of a hydroxylated HIF-1 alpha peptide bound to the pVHL/elongin-C/elongin-B complex
Descriptor: Elongin B, Elongin C, Hypoxia-inducible factor 1 ALPHA, ...
Authors:Hon, W.C, Wilson, M.I, Harlos, K, Claridge, T.D, Schofield, C.J, Pugh, C.W, Maxwell, P.H, Ratcliffe, P.J, Stuart, D.I, Jones, E.Y.
Deposit date:2002-05-09
Release date:2002-07-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the recognition of hydroxyproline in HIF-1 alpha by pVHL.
Nature, 417, 2002
1M94
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BU of 1m94 by Molmil
Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1
Descriptor: Protein YNR032c-a
Authors:Ramelot, T.A, Cort, J.R, Yee, A.A, Semesi, A, Edwards, A.M, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2002-07-26
Release date:2002-12-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1
J.STRUCT.FUNCT.GENOM., 4, 2003
1MG8
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BU of 1mg8 by Molmil
NMR structure of ubiquitin-like domain in murine Parkin
Descriptor: Parkin
Authors:Tashiro, M, Okubo, S, Shimotakahara, S, Hatanaka, H, Yasuda, H, Kainosho, M, Yokoyama, S, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-08-15
Release date:2003-04-08
Last modified:2022-12-21
Method:SOLUTION NMR
Cite:NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease.
J.Biomol.NMR, 25, 2003
1NBF
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BU of 1nbf by Molmil
Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde
Descriptor: Ubiquitin aldehyde, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Hu, M, Li, P, Li, M, Li, W, Yao, T, Wu, J.-W, Gu, W, Cohen, R.E, Shi, Y.
Deposit date:2002-12-02
Release date:2003-01-07
Last modified:2018-10-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde
Cell(Cambridge,Mass.), 111, 2002
1NDD
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BU of 1ndd by Molmil
STRUCTURE OF NEDD8
Descriptor: CHLORIDE ION, PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8), SULFATE ION
Authors:Whitby, F.G, Xia, G, Pickart, C.M, Hill, C.P.
Deposit date:1998-08-21
Release date:1999-02-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes.
J.Biol.Chem., 273, 1998
1OGW
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BU of 1ogw by Molmil
Synthetic Ubiquitin with fluoro-Leu at 50 and 67
Descriptor: UBIQUITIN
Authors:Alexeev, D, Ramage, R, Young, D.W, Sawyer, L.
Deposit date:2003-05-13
Release date:2003-05-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Synthesis, Structural and Biological Studies of Ubiquitin Mutants Containing (2S, 4S)-5-Fluoroleucine Residues Strategically Placed in the Hydrophobic Core
Chembiochem, 4, 2003
1OQY
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BU of 1oqy by Molmil
Structure of the DNA repair protein hHR23a
Descriptor: UV excision repair protein RAD23 homolog A
Authors:Walters, K.J, Lech, P.J, Goh, A.M, Wang, Q, Howley, P.M.
Deposit date:2003-03-11
Release date:2003-10-21
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a
Proc.Natl.Acad.Sci.USA, 100, 2003
1OTR
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BU of 1otr by Molmil
Solution Structure of a CUE-Ubiquitin Complex
Descriptor: Ubiquitin, protein Cue2
Authors:Kang, R.S, Daniels, C.M, Salerno, W.J, Radhakrishnan, I.
Deposit date:2003-03-22
Release date:2003-06-24
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution Structure of a CUE-Ubiquitin Complex Reveals a Conserved Mode of Ubiquitin Binding
Cell(Cambridge,Mass.), 113, 2003
1P0R
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Solution Structure of UBL5 a human Ubiquitin-Like Protein
Descriptor: ubiquitin-like 5
Authors:McNally, T, Huang, Q, Janis, R.S, Liu, Z, Olejniczak, E.T, Reilly, R.M.
Deposit date:2003-04-10
Release date:2003-10-28
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural analysis of UBL5, a novel ubiquitin-like modifier
Protein Sci., 12, 2003
1P1A
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BU of 1p1a by Molmil
NMR structure of ubiquitin-like domain of hHR23B
Descriptor: UV excision repair protein RAD23 homolog B
Authors:Ryu, K.S, Lee, K.J, Bae, S.H, Kim, B.K, Kim, K.A, Choi, B.S.
Deposit date:2003-04-11
Release date:2004-07-13
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Binding surface mapping of intra- and interdomain interactions among hHR23B, ubiquitin, and polyubiquitin binding site 2 of S5a
J.Biol.Chem., 278, 2003
1P3Q
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Mechanism of Ubiquitin Recognition by the CUE Domain of VPS9
Descriptor: Ubiquitin, Vacuolar protein sorting-associated protein VPS9
Authors:Prag, G, Misra, S, Jones, E.A, Ghirlando, R, Davies, B.A, Horazdovsky, B.F, Hurley, J.H.
Deposit date:2003-04-18
Release date:2003-06-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of Ubiquitin Recognition by the CUE Domain of Vps9p.
Cell(Cambridge,Mass.), 113, 2003

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