PDB: 76 resultsInfo pagesStatus searchChemie searchBIRD

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7C45	The crystal structure of Trypanosoma brucei RNase D complex with RNA U12 Descriptor: CALCIUM ION, CCHC-type domain-containing protein, RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ... Authors: Gao, Y.Q, Gan, J.H. Deposit date: 2020-05-15 Release date: 2021-04-07 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.769 Å) Cite: Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
5UDZ	Human LIN28A in complex with let-7f-1 microRNA pre-element Descriptor: Protein lin-28 homolog A, ZINC ION, let-7f-1 pre-element Authors: Nam, Y, Wang, L, Sliz, P. Deposit date: 2016-12-29 Release date: 2017-03-22 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2 Å) Cite: LIN28 Zinc Knuckle Domain Is Required and Sufficient to Induce let-7 Oligouridylation. Cell Rep, 18, 2017
7C42	The crystal structure of Trypanosoma brucei RNase D Descriptor: CCHC-type domain-containing protein, ZINC ION Authors: Gao, Y.Q, Gan, J.H. Deposit date: 2020-05-14 Release date: 2021-04-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
3TS2	Mouse Lin28A in complex with let-7g microRNA pre-element Descriptor: Protein lin-28 homolog A, RNA (5'-R(*GP*GP*GP*GP*UP*CP*UP*AP*UP*GP*AP*UP*AP*CP*CP*AP*CP*CP*CP*CP*GP*GP*AP*G)-3'), ZINC ION Authors: Nam, Y, Sliz, P. Deposit date: 2011-09-11 Release date: 2011-11-16 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.), 147, 2011
7C4B	The crystal structure of Trypanosoma brucei RNase D : UMP complex Descriptor: CCHC-type domain-containing protein, MANGANESE (II) ION, URIDINE-5'-MONOPHOSPHATE, ... Authors: Gao, Y.Q, Gan, J.H. Deposit date: 2020-05-15 Release date: 2021-04-07 Method: X-RAY DIFFRACTION (2.101 Å) Cite: Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
7C47	The crystal structure of Trypanosoma brucei RNase D : CMP complex Descriptor: CCHC-type domain-containing protein, CYTIDINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ... Authors: Gao, Y.Q, Gan, J.H. Deposit date: 2020-05-15 Release date: 2021-04-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
7C4C	The crystal structure of Trypanosoma brucei RNase D : GMP complex Descriptor: CCHC-type domain-containing protein, GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ... Authors: Gao, Y.Q, Gan, J.H. Deposit date: 2020-05-15 Release date: 2021-04-07 Method: X-RAY DIFFRACTION (2.265 Å) Cite: Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
5W0M	Structure of human TUT7 catalytic module (CM) in complex with U5 RNA Descriptor: IODIDE ION, SULFATE ION, Terminal uridylyltransferase 7, ... Authors: Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. Deposit date: 2017-05-31 Release date: 2017-06-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.298 Å) Cite: Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
7C43	The crystal structure of Trypanosoma brucei RNase D : AMP complex Descriptor: ADENOSINE MONOPHOSPHATE, CCHC-type domain-containing protein, MANGANESE (II) ION, ... Authors: Gao, Y.Q, Gan, J.H. Deposit date: 2020-05-14 Release date: 2021-04-07 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
5W0O	Structure of human TUT7 catalytic module (CM) in complex with dsRNA Descriptor: Terminal uridylyltransferase 7, URIDINE 5'-TRIPHOSPHATE, double-stranded RNA Authors: Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. Deposit date: 2017-05-31 Release date: 2017-06-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.488 Å) Cite: Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
5W0N	Structure of human TUT7 catalytic module (CM) in complex with UMPNPP and U2 RNA Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, IODIDE ION, MAGNESIUM ION, ... Authors: Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. Deposit date: 2017-05-31 Release date: 2017-06-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.497 Å) Cite: Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
8E3I	CRYO-EM STRUCTURE OF the human MPSF IN COMPLEX WITH THE AUUAAA poly(A) signal Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, RNA (5'-R(P*CP*AP*UP*UP*AP*AP*AP*CP*AP*AP*C)-3'), ... Authors: Gutierrez, P.A, Wei, J, Sun, Y, Tong, L. Deposit date: 2022-08-17 Release date: 2023-01-18 Method: ELECTRON MICROSCOPY (2.53 Å) Cite: Molecular basis for the recognition of the AUUAAA polyadenylation signal by mPSF. Rna, 28, 2022
5W0B	Structure of human TUT7 catalytic module (CM) Descriptor: IODIDE ION, SULFATE ION, Terminal uridylyltransferase 7, ... Authors: Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. Deposit date: 2017-05-30 Release date: 2017-06-28 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.614 Å) Cite: Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
8E3Q	CRYO-EM STRUCTURE OF the human MPSF Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, ZINC ION, ... Authors: Gutierrez, P.A, Wei, J, Sun, Y, Tong, L. Deposit date: 2022-08-17 Release date: 2023-01-18 Method: ELECTRON MICROSCOPY (2.68 Å) Cite: Molecular basis for the recognition of the AUUAAA polyadenylation signal by mPSF. Rna, 28, 2022
3NYB	Structure and function of the polymerase core of TRAMP, a RNA surveillance complex Descriptor: Poly(A) RNA polymerase protein 2, Protein AIR2, ZINC ION Authors: Reinisch, K.M, Hamill, S. Deposit date: 2010-07-14 Release date: 2010-08-04 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.7007 Å) Cite: Structure and function of the polymerase core of TRAMP, a RNA surveillance complex. Proc.Natl.Acad.Sci.USA, 107, 2010
5O2U	Llama VHH in complex with p24 Descriptor: Capsid protein p24, VHH 59H10 Authors: Caillat, C, Verrips, T, Weissenhorn, W. Deposit date: 2017-05-22 Release date: 2017-06-21 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.76 Å) Cite: Unravelling the Molecular Basis of High Affinity Nanobodies against HIV p24: In Vitro Functional, Structural, and in Silico Insights. ACS Infect Dis, 3, 2017
3TS0	Mouse Lin28A in complex with let-7f-1 microRNA pre-element Descriptor: Protein lin-28 homolog A, RNA (5'-R(*GP*GP*GP*GP*UP*AP*GP*UP*GP*AP*UP*UP*UP*UP*AP*CP*CP*CP*UP*GP*GP*AP*G)-3'), ZINC ION Authors: Nam, Y, Sliz, P. Deposit date: 2011-09-11 Release date: 2011-11-16 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.763 Å) Cite: Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.), 147, 2011
3TRZ	Mouse Lin28A in complex with let-7d microRNA pre-element Descriptor: Protein lin-28 homolog A, RNA (5'-R(*GP*GP*GP*CP*AP*GP*GP*GP*AP*UP*UP*UP*UP*GP*CP*CP*CP*GP*GP*AP*G)-3'), ZINC ION Authors: Nam, Y, Sliz, P. Deposit date: 2011-09-11 Release date: 2011-11-16 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.), 147, 2011
7VPX	The cryo-EM structure of the human pre-A complex Descriptor: 5SS, DnaJ homolog subfamily C member 8, PHD finger-like domain-containing protein 5A, ... Authors: Zhang, X, Zhan, X, Shi, Y. Deposit date: 2021-10-18 Release date: 2023-05-03 Method: ELECTRON MICROSCOPY (3 Å) Cite: Mechanism for Branch Site Recognition and Proofreading During Prespliceosome Assembly To Be Published
6URG	Cryo-EM structure of human CPSF160-WDR33-CPSF30-CPSF100 PIM complex Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 2, Cleavage and polyadenylation specificity factor subunit 4, ... Authors: Sun, Y, Zhang, Y, Walz, T, Tong, L. Deposit date: 2019-10-23 Release date: 2019-11-27 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural Insights into the Human Pre-mRNA 3'-End Processing Machinery. Mol.Cell, 77, 2020
7W5Z	Cryo-EM structure of Tetrahymena thermophila mitochondrial complex IV, composite dimer model Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-oxoglutarate/malate carrier protein, CARDIOLIPIN, ... Authors: Zhou, L, Maldonado, M, Padavannil, A, Letts, J. Deposit date: 2021-11-30 Release date: 2022-04-06 Last modified: 2022-06-01 Method: ELECTRON MICROSCOPY (3.02 Å) Cite: Structures of Tetrahymena 's respiratory chain reveal the diversity of eukaryotic core metabolism. Science, 376, 2022
8C9M	HERV-K Gag immature lattice Descriptor: Gag protein Authors: Krebs, A.-S, Liu, H.-F, Zhou, Y, Rey, J.S, Levintov, L, Perilla, J.R, Bartesaghi, A, Zhang, P. Deposit date: 2023-01-23 Release date: 2023-02-01 Last modified: 2023-07-05 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Molecular architecture and conservation of an immature human endogenous retrovirus. Biorxiv, 2023
6DNH	Cryo-EM structure of human CPSF-160-WDR33-CPSF-30-PAS RNA complex at 3.4 A resolution Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, RNA (5'-R(P*AP*AP*UP*AP*AP*AP*C)-3'), ... Authors: Sun, Y, Zhang, Y, Hamilton, K, Walz, T, Tong, L. Deposit date: 2018-06-06 Release date: 2018-06-27 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Molecular basis for the recognition of the human AAUAAA polyadenylation signal. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7Z52	Human NEXT dimer - focused reconstruction of the single MTR4 Descriptor: Exosome RNA helicase MTR4, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(P*UP*UP*UP*UP*U)-3'), ... Authors: Gerlach, P, Lingaraju, M, Salerno-Kochan, A, Bonneau, F, Basquin, J, Conti, E. Deposit date: 2022-03-07 Release date: 2022-06-22 Last modified: 2022-07-20 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome. Mol.Cell, 82, 2022
6URO	Cryo-EM structure of human CPSF160-WDR33-CPSF30-PAS RNA-CstF77 complex Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, Cleavage stimulation factor subunit 3, ... Authors: Sun, Y, Zhang, Y, Walz, T, Tong, L. Deposit date: 2019-10-23 Release date: 2019-11-27 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structural Insights into the Human Pre-mRNA 3'-End Processing Machinery. Mol.Cell, 77, 2020

 

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