1A6B
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NMR STRUCTURE OF THE COMPLEX BETWEEN THE ZINC FINGER PROTEIN NCP10 OF MOLONEY MURINE LEUKEMIA VIRUS AND A SEQUENCE OF THE PSI-PACKAGING DOMAIN OF HIV-1, 20 STRUCTURES
Descriptor:ZINC FINGER PROTEIN NCP10/DNA Complex
Authors:Schueler, W., Dong, C.-Z., Wecker, K., Roques, B.P.
Deposit date:1998-02-23
Release date:1999-08-23
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:NMR structure of the complex between the zinc finger protein NCp10 of Moloney murine leukemia virus and the single-stranded pentanucleotide d(ACGCC): comparison with HIV-NCp7 complexes.
Biochemistry, 38, 1999
1DSQ
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STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)
Descriptor:NUCLEIC ACID BINDING PROTEIN P14
Authors:Klein, D.J., Johnson, P.E., Zollars, E.S., De Guzman, R.N., Summers, M.F.
Deposit date:2000-01-08
Release date:2000-01-28
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:The NMR structure of the nucleocapsid protein from the mouse mammary tumor virus reveals unusual folding of the C-terminal zinc knuckle.
Biochemistry, 39, 2000
1ESK
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SOLUTION STRUCTURE OF NCP7 FROM HIV-1
Descriptor:GAG POLYPROTEIN
Authors:Morellet, N., Demene, H., Teilleux, V., Huynh-Dinh, T., de Rocquigny, H., Fournie-Zaluski, M.-C., Roques, B.P.
Deposit date:2000-04-10
Release date:2000-04-26
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Solution Structure of (12-53)NCp7 of HIV-1
To be Published
1NCP
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STRUCTURAL CHARACTERIZATION OF A 39 RESIDUE SYNTHETIC PEPTIDE CONTAINING THE TWO ZINC BINDING DOMAINS FROM THE HIV-1 P7 NUCLEOCAPSID PROTEIN BY CD AND NMR SPECTROSCOPY
Descriptor:HIV-1 P7 NUCLEOCAPSID PROTEIN (TWO ZINC BINDING DOMAINS) (NMR, MINIMIZED AVERAGE STRUCTURE)
Authors:Clore, G.M., Omichinski, J.G., Gronenborn, A.M.
Deposit date:1991-11-27
Release date:1993-10-31
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Structural characterization of a 39-residue synthetic peptide containing the two zinc binding domains from the HIV-1 p7 nucleocapsid protein by CD and NMR spectroscopy.
FEBS Lett., 292, 1991
1Q3Y
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NMR STRUCTURE OF THE CYS28HIS MUTANT (D FORM) OF THE NUCLEOCAPSID PROTEIN NCP7 OF HIV-1.
Descriptor:GAG protein
Authors:Ramboarina, S., Druillennec, S., Morellet, N., Bouaziz, S., Roques, B.P.
Deposit date:2003-08-01
Release date:2004-09-07
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Target specificity of human immunodeficiency virus type 1 NCp7 requires an intact conformation of its CCHC N-terminal zinc finger.
J.Virol., 78, 2004
1Q3Z
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NMR STRUCTURE OF THE CYS28HIS MUTANT (E FORM) OF THE NUCLEOCAPSID PROTEIN NCP7 OF HIV-1.
Descriptor:GAG protein
Authors:Ramboarina, S., Druillennec, S., Morellet, N., Bouaziz, S., Roques, B.P.
Deposit date:2003-08-01
Release date:2004-09-07
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Target specificity of human immunodeficiency virus type 1 NCp7 requires an intact conformation of its CCHC N-terminal zinc finger.
J.Virol., 78, 2004
1U6P
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NMR STRUCTURE OF THE MLV ENCAPSIDATION SIGNAL BOUND TO THE NUCLEOCAPSID PROTEIN
Descriptor:Nucleoprotein p10/RNA Complex
Authors:D'Souza, V., Summers, M.F.
Deposit date:2004-07-30
Release date:2004-11-02
Modification date:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus
Nature, 431, 2004
1WWD
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NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE AACAGU
Descriptor:Nucleoprotein p10/RNA Complex
Authors:Dey, A., York, D., Smalls-Mantey, A., Summers, M.F.
Deposit date:2005-01-05
Release date:2005-03-22
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
1WWE
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NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE UUUUGCU
Descriptor:Nucleoprotein p10/RNA Complex
Authors:Dey, A., York, D., Smalls-Mantey, A., Summers, M.F.
Deposit date:2005-01-05
Release date:2005-03-22
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
1WWF
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NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE CCUCCGU
Descriptor:Nucleoprotein p10/RNA Complex
Authors:Dey, A., York, D., Smalls-Mantey, A., Summers, M.F.
Deposit date:2005-01-05
Release date:2005-04-05
Modification date:2011-12-14
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
1WWG
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NMR STRUCTURE DETERMINED FOR MLV NC COMPLEX WITH RNA SEQUENCE UAUCUG
Descriptor:Nucleoprotein p10/RNA Complex
Authors:Dey, A., York, D., Smalls-Mantey, A., Summers, M.F.
Deposit date:2005-01-05
Release date:2005-04-05
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Composition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)
Biochemistry, 44, 2005
2CQF
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SOLUTION STRUCTURE OF THE ZINC-FINGER DOMAIN IN LIN-28
Descriptor:RNA-binding protein LIN-28
Authors:Someya, T., Muto, Y., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Solution Structure of the Zinc-finger domain in LIN-28
To be Published
2LI8
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THE SOLUTION STRUCTURE OF THE LIN28-ZNF DOMAINS BOUND TO AGGAGAU OF PRE-LET-7 MIRNA
Descriptor:Protein lin-28 homolog A/RNA complex
Authors:Allain, F.H.-T., Loughlin, F.E.
Deposit date:2011-08-25
Release date:2011-12-07
Modification date:2012-01-25
Method:SOLUTION NMR
Cite:Structural basis of pre-let-7 miRNA recognition by the zinc knuckles of pluripotency factor Lin28.
Nat.Struct.Mol.Biol., 19, 2011
2LLI
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LOW RESOLUTION STRUCTURE OF RNA-BINDING SUBUNIT OF THE TRAMP COMPLEX
Descriptor:Protein AIR2
Authors:Holub, P., Lalakova, J., Cerna, H., Sarazova, M., Pasulka, J., Hrazdilova, K., Arce, M.S., Stefl, R., Vanacova, S.
Deposit date:2011-11-10
Release date:2012-03-21
Modification date:2012-07-11
Method:SOLUTION NMR
Cite:Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation.
Nucleic Acids Res., 40, 2012
2MQV
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SOLUTION NMR STRUCTURE OF THE U5-PRIMER BINDING SITE (U5-PBS) DOMAIN OF MURINE LEUKEMIA VIRUS RNA GENOME BOUND TO THE RETROVIRAL NUCLEOCAPSID PROTEIN
Descriptor:Nucleocapsid protein p10
Authors:D'Souza, V.M., Yildiz, Z.
Deposit date:2014-06-27
Release date:2014-09-17
Modification date:2014-12-24
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2MS0
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SOLUTION NMR STRUCTURE PF TRNAPRO:MLV-NUCLEOCAPSID (1:2) COMPLEX
Descriptor:Nucleocapsid protein p10/tRNApro
Authors:D'Souza, V., Yildiz, Z.
Deposit date:2014-07-19
Release date:2014-09-17
Modification date:2014-12-24
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2MS1
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SOLUTION NMR STRUCTURE OF TRNAPRO:MLV NUCLEOCAPSID PROTEIN (1:1) COMPLEX
Descriptor:Nucleocapsid protein p10
Authors:D'Souza, V., Yildiz, Z.
Deposit date:2014-07-19
Release date:2014-09-10
Modification date:2014-12-24
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
5I1R
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QUANTITATIVE CHARACTERIZATION OF CONFIGURATIONAL SPACE SAMPLED BY HIV-1 NUCLEOCAPSID USING SOLUTION NMR AND X-RAY SCATTERING
Descriptor:Nucleocapsid protein p7
Authors:Deshmukh, L., Schwieters, C.D., Grishaev, A., Clore, G.M.
Deposit date:2016-02-05
Release date:2016-03-30
Modification date:2016-06-29
Method:SOLUTION SCATTERING, SOLUTION NMR
Cite:Quantitative Characterization of Configurational Space Sampled by HIV-1 Nucleocapsid Using Solution NMR, X-ray Scattering and Protein Engineering.
Chemphyschem, 17, 2016
3TRZ
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MOUSE LIN28A IN COMPLEX WITH LET-7D MICRORNA PRE-ELEMENT
Descriptor:Protein lin-28 homolog A/RNA complex
Authors:Nam, Y., Sliz, P.
Deposit date:2011-09-11
Release date:2011-11-16
Modification date:2011-12-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular Basis for Interaction of let-7 MicroRNAs with Lin28.
Cell(Cambridge,Mass.), 147, 2011
3TS0
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MOUSE LIN28A IN COMPLEX WITH LET-7F-1 MICRORNA PRE-ELEMENT
Descriptor:Protein lin-28 homolog A/RNA complex
Authors:Nam, Y., Sliz, P.
Deposit date:2011-09-11
Release date:2011-11-16
Modification date:2011-12-14
Method:X-RAY DIFFRACTION (2.763 Å)
Cite:Molecular Basis for Interaction of let-7 MicroRNAs with Lin28.
Cell(Cambridge,Mass.), 147, 2011
3TS2
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MOUSE LIN28A IN COMPLEX WITH LET-7G MICRORNA PRE-ELEMENT
Descriptor:Protein lin-28 homolog A/RNA complex
Authors:Nam, Y., Sliz, P.
Deposit date:2011-09-11
Release date:2011-11-16
Modification date:2011-12-14
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Molecular Basis for Interaction of let-7 MicroRNAs with Lin28.
Cell(Cambridge,Mass.), 147, 2011
3NYB
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STRUCTURE AND FUNCTION OF THE POLYMERASE CORE OF TRAMP, A RNA SURVEILLANCE COMPLEX
Descriptor:Poly(A) RNA polymerase protein 2 (E.C.2.7.7.-), Protein AIR2
Authors:Reinisch, K.M., Hamill, S.
Deposit date:2010-07-14
Release date:2010-08-04
Modification date:2010-09-08
Method:X-RAY DIFFRACTION (2.7007 Å)
Cite:Structure and function of the polymerase core of TRAMP, a RNA surveillance complex.
Proc.Natl.Acad.Sci.USA, 107, 2010
4U4C
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THE MOLECULAR ARCHITECTURE OF THE TRAMP COMPLEX REVEALS THE ORGANIZATION AND INTERPLAY OF ITS TWO CATALYTIC ACTIVITIES
Descriptor:Mtr4, Dob1 (E.C.3.6.4.13), Air2-Trf4 Fusion
Authors:Falk, S., Weir, J.R., Hentschel, J., Reichelt, P., Bonneau, F., Conti, E.
Deposit date:2014-07-23
Release date:2014-09-24
Modification date:2014-10-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Molecular Architecture of the TRAMP Complex Reveals the Organization and Interplay of Its Two Catalytic Activities.
Mol.Cell, 55, 2014
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