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7JSA
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BU of 7jsa by Molmil
Crystal structure of the DNA binding domain of human transcription factor ERF in the reduced form, in complex with double-stranded DNA ACCGGAAGTG
Descriptor: DNA (5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), ETS domain-containing transcription factor ERF
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2020-08-14
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Insight into the DNA Binding Function of Transcription Factor ERF.
Biochemistry, 2020
7JSL
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BU of 7jsl by Molmil
Crystal structure of the DNA binding domain of human transcription factor ERF in the oxidized form, in complex with double-stranded DNA ACCGGAAGTG
Descriptor: DNA (5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), ETS domain-containing transcription factor ERF
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2020-08-14
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (4.51 Å)
Cite:Structural Insight into the DNA Binding Function of Transcription Factor ERF.
Biochemistry, 2020
6TZH
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BU of 6tzh by Molmil
ADC-7 in complex with boronic acid transition state inhibitor S06015
Descriptor: Beta-lactamase, GLYCINE, PHOSPHATE ION, ...
Authors:Fish, E.R, Powers, R.A, Wallar, B.J.
Deposit date:2019-08-12
Release date:2020-06-24
Last modified:2020-07-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of beta-Lactamase Inhibitors againstAcinetobacter baumanniiCephalosporinase.
Acs Infect Dis., 6, 2020
5WX9
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BU of 5wx9 by Molmil
Crystal Structure of AtERF96 with GCC-box
Descriptor: Ethylene-responsive transcription factor ERF096, GCC-box motif
Authors:Chen, C.Y, Cheng, Y.S.
Deposit date:2017-01-06
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box.
Plant Mol.Biol., 104, 2020
7ET4
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BU of 7et4 by Molmil
Crystal structure of Arabidopsis TEM1 AP2 domain
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, DNA (12-mer)
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ET5
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BU of 7et5 by Molmil
Crystal structure of Arabidopsis TEM1 AP2 domain
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, SULFATE ION
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.052 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ET6
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BU of 7et6 by Molmil
Crystal structure of Arabidopsis TEM1 B3-DNA complex
Descriptor: AP2/ERF and B3 domain-containing transcription repressor TEM1, FT-RY14-F, FT-RY14-R
Authors:Hu, H, Du, J.
Deposit date:2021-05-12
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
5XKN
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BU of 5xkn by Molmil
Crystal structure of plant receptor ERL2 in complexe with EPFL4
Descriptor: EPIDERMAL PATTERNING FACTOR-like protein 4, LRR receptor-like serine/threonine-protein kinase ERL2
Authors:Chai, J, Lin, G.
Deposit date:2017-05-08
Release date:2019-01-23
Method:X-RAY DIFFRACTION (3.651 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
5XJO
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BU of 5xjo by Molmil
Plant receptor ERL1-TMM in complex with peptide EPF1
Descriptor: LRR receptor-like serine/threonine-protein kinase ERL1, Protein EPIDERMAL PATTERNING FACTOR 1, Protein TOO MANY MOUTHS
Authors:Chai, J, Lin, G, Zhang, L, Han, Z, Shpak, E.D, Yang, X.
Deposit date:2017-05-03
Release date:2019-01-23
Method:X-RAY DIFFRACTION (2.626 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
5XJX
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BU of 5xjx by Molmil
Pre-formed plant receptor ERL1-TMM complex
Descriptor: LRR receptor-like serine/threonine-protein kinase ERL1, Protein TOO MANY MOUTHS
Authors:Chai, J, Lin, G, Zhang, L, Han, Z, Yang, X, Liu, W, Qi, Y, Chang, J, Li, E.
Deposit date:2017-05-04
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.055 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
5XKJ
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BU of 5xkj by Molmil
Crystal structure of plant receptor ERL1-TMM in complexe with EPF2
Descriptor: LRR receptor-like serine/threonine-protein kinase ERL1, Protein EPIDERMAL PATTERNING FACTOR 2, Protein TOO MANY MOUTHS
Authors:Chai, J, Lin, G.
Deposit date:2017-05-07
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.475 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
6S7E
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BU of 6s7e by Molmil
Plant Cysteine Oxidase PCO4 from Arabidopsis thaliana (using PEG 3350 and NaF as precipitants)
Descriptor: FE (III) ION, Plant cysteine oxidase 4
Authors:White, M.D, Levy, C.W, Flashman, E, McDonough, M.A.
Deposit date:2019-07-04
Release date:2020-07-22
Last modified:2020-12-23
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structures of Arabidopsis thaliana oxygen-sensing plant cysteine oxidases 4 and 5 enable targeted manipulation of their activity.
Proc.Natl.Acad.Sci.USA, 117, 2020
6S0P
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BU of 6s0p by Molmil
Plant Cysteine Oxidase PCO4 from Arabidopsis thaliana
Descriptor: FE (III) ION, Plant cysteine oxidase 4
Authors:White, M.D, Flashman, E, McDonough, M.A.
Deposit date:2019-06-17
Release date:2020-07-15
Last modified:2020-12-23
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Structures of Arabidopsis thaliana oxygen-sensing plant cysteine oxidases 4 and 5 enable targeted manipulation of their activity.
Proc.Natl.Acad.Sci.USA, 117, 2020
6SBP
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BU of 6sbp by Molmil
Plant Cysteine Oxidase PCO5 from Arabidopsis thaliana
Descriptor: GLYCEROL, NICKEL (II) ION, Plant cysteine oxidase 5
Authors:White, M.D, Flashman, E, McDonough, M.A.
Deposit date:2019-07-22
Release date:2020-07-01
Last modified:2020-12-23
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structures of Arabidopsis thaliana oxygen-sensing plant cysteine oxidases 4 and 5 enable targeted manipulation of their activity.
Proc.Natl.Acad.Sci.USA, 117, 2020
4V6F
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BU of 4v6f by Molmil
Elongation complex of the 70S ribosome with three tRNAs and mRNA.
Descriptor: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 23S RRNA, ...
Authors:Jenner, L.B, Yusupova, G, Yusupov, M.
Deposit date:2009-07-09
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural aspects of messenger RNA reading frame maintenance by the ribosome.
Nat.Struct.Mol.Biol., 17, 2010
7WQ5
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BU of 7wq5 by Molmil
Crystal structure of Arabidopsis transcriptional factor WRINKLED1 with dsDNA
Descriptor: AMMONIUM ION, DNA (5'-D(P*GP*TP*GP*GP*AP*CP*GP*AP*TP*GP*AP*AP*AP*CP*CP*GP*AP*GP*GP*AP*AP*GP*TP*A)-3'), DNA (5'-D(P*TP*AP*CP*TP*TP*CP*CP*TP*CP*GP*GP*TP*TP*TP*CP*AP*TP*CP*GP*TP*CP*CP*AP*C)-3'), ...
Authors:Zhu, Q, Gao, Y.G.
Deposit date:2022-01-24
Release date:2022-08-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Molecular basis of the key regulator WRINKLED1 in plant oil biosynthesis.
Sci Adv, 8, 2022
7Y7A
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BU of 7y7a by Molmil
In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
Descriptor: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (2S)-2,3-dihydroxypropyl octadecanoate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sun, S, Sui, S.F.
Deposit date:2022-06-22
Release date:2023-02-08
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Nature, 616, 2023
3IZQ
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BU of 3izq by Molmil
Structure of the Dom34-Hbs1-GDPNP complex bound to a translating ribosome
Descriptor: Elongation factor 1 alpha-like protein, Protein DOM34
Authors:Becker, T, Armache, J.-P, Jarasch, A, Anger, A.M, Villa, E, Sieber, H, Abdel Motaal, B, Mielke, T, Berninghausen, O, Beckmann, R.
Deposit date:2010-11-30
Release date:2011-06-01
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome.
Nat.Struct.Mol.Biol., 18, 2011
1RGO
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BU of 1rgo by Molmil
Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
Descriptor: Butyrate response factor 2, RNA (5'-R(*UP*UP*AP*UP*UP*UP*AP*UP*U)-3'), ZINC ION
Authors:Hudson, B.P, Martinez-Yamout, M.A, Dyson, H.J, Wright, P.E.
Deposit date:2003-11-12
Release date:2004-03-02
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d.
NAT.STRUCT.MOL.BIOL., 11, 2004
1GCC
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BU of 1gcc by Molmil
SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE
Descriptor: DNA (5'-D(*GP*CP*TP*GP*GP*CP*GP*GP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*CP*CP*GP*CP*CP*AP*GP*C)-3'), ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Authors:Yamasaki, K, Allen, M.D, Ohme-Takagi, M, Tateno, M, Suzuki, M.
Deposit date:1998-03-13
Release date:1999-03-23
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA.
EMBO J., 17, 1998
2GCC
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BU of 2gcc by Molmil
SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
Descriptor: ATERF1
Authors:Allen, M.D, Yamasaki, K, Ohme-Takagi, M, Tateno, M, Suzuki, M.
Deposit date:1998-03-13
Release date:1999-03-23
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA.
EMBO J., 17, 1998
3E20
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BU of 3e20 by Molmil
Crystal structure of S.pombe eRF1/eRF3 complex
Descriptor: Eukaryotic peptide chain release factor GTP-binding subunit, Eukaryotic peptide chain release factor subunit 1
Authors:Cheng, Z, Lim, M, Kong, C, Song, H.
Deposit date:2008-08-05
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural insights into eRF3 and stop codon recognition by eRF1
Genes Dev., 23, 2009
1R5O
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BU of 1r5o by Molmil
crystal structure analysis of sup35 complexed with GMPPNP
Descriptor: Eukaryotic peptide chain release factor GTP-binding subunit, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Kong, C, Song, H.
Deposit date:2003-10-11
Release date:2004-05-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure and functional analysis of the eukaryotic class II release factor eRF3 from S. pombe
Mol.Cell, 14, 2004
1YJO
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BU of 1yjo by Molmil
Structure of NNQQNY from yeast prion Sup35 with zinc acetate
Descriptor: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
1YJP
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BU of 1yjp by Molmil
Structure of GNNQQNY from yeast prion Sup35
Descriptor: Eukaryotic peptide chain release factor GTP-binding subunit
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005

 

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