PDB: 11 resultsInfo pagesStatus searchChemie searchBIRD

---

8K8D	Crystal structure of C/EBPbeta BZIP domain bound to a high affinity DNA Descriptor: CCAAT/enhancer-binding protein beta, DNA (5'-D(*CP*AP*TP*TP*AP*CP*GP*TP*AP*AP*TP*G)-3') Authors: Min, J.R, Chen, S.Z, Liu, K. Deposit date: 2023-07-29 Release date: 2024-03-06 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural basis for specific DNA sequence recognition by the transcription factor NFIL3. J.Biol.Chem., 300, 2024
7UPZ	Structural basis for cell type specific DNA binding of C/EBPbeta: the case of cell cycle inhibitor p15INK4b promoter Descriptor: CCAAT/enhancer-binding protein beta, DNA (5'-D(*AP*TP*TP*CP*TP*TP*AP*AP*GP*AP*AP*AP*GP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*CP*TP*TP*TP*CP*TP*TP*AP*AP*GP*AP*A)-3') Authors: Lountos, G.T, Cherry, S, Tropea, J.E, Wlodawer, A, Miller, M. Deposit date: 2022-04-18 Release date: 2022-11-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.487 Å) Cite: Structural basis for cell type specific DNA binding of C/EBP beta : The case of cell cycle inhibitor p15INK4b promoter. J.Struct.Biol., 214, 2022
7L4V	C-terminal bZIP domain of human C/EBPbeta Bound to DNA with Consensus Recognition with GT Mismatch Descriptor: 1,2-ETHANEDIOL, CCAAT/enhancer-binding protein beta, DNA Strand 1, ... Authors: Horton, J.R, Cheng, X. Deposit date: 2020-12-21 Release date: 2021-11-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Preferential CEBP binding to T:G mismatches and increased C-to-T human somatic mutations. Nucleic Acids Res., 49, 2021
2E42	Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragment Descriptor: CCAAT/enhancer-binding protein beta, DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3') Authors: Tahirov, T.H, Inoue-Bungo, T, Sato, K, Shiina, M, Hamada, K, Ogata, K. Deposit date: 2006-12-01 Release date: 2007-12-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
2E43	Crystal structure of C/EBPbeta Bzip homodimer K269A mutant bound to A High Affinity DNA fragment Descriptor: CCAAT/enhancer-binding protein beta, DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3') Authors: Tahirov, T.H, Inoue-Bungo, T, Sato, K, Shiina, M, Hamada, K, Ogata, K. Deposit date: 2006-12-01 Release date: 2007-12-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
6MG1	C-terminal bZIP domain of human C/EBPbeta with 16bp Methylated Oligonucleotide Containing Consensus Recognition Sequence-C2 Crystal Form Descriptor: 1,2-ETHANEDIOL, 16-bp methylated oligonucleotide, CCAAT/enhancer-binding protein beta, ... Authors: Horton, J.R, Cheng, X, Yang, J. Deposit date: 2018-09-12 Release date: 2018-12-12 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural basis for effects of CpA modifications on C/EBP beta binding of DNA. Nucleic Acids Res., 47, 2019
6MG3	V285A Mutant of the C-terminal bZIP domain of human C/EBPbeta with 16bp Methylated Oligonucleotide Containing Consensus Recognition Sequence Descriptor: 1,2-ETHANEDIOL, 16-bp methylated oligonucleotide, CCAAT/enhancer-binding protein beta Authors: Horton, J.R, Cheng, X, Yang, J. Deposit date: 2018-09-12 Release date: 2018-12-12 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structural basis for effects of CpA modifications on C/EBP beta binding of DNA. Nucleic Acids Res., 47, 2019
6MG2	C-terminal bZIP domain of human C/EBPbeta with 16bp Methylated Oligonucleotide Containing Consensus Recognition Sequence-C2221 Crystal Form Descriptor: 1,2-ETHANEDIOL, 16-bp methylated oligonucleotide, CCAAT/enhancer-binding protein beta Authors: Horton, J.R, Cheng, X, Yang, J. Deposit date: 2018-09-12 Release date: 2018-12-12 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.928 Å) Cite: Structural basis for effects of CpA modifications on C/EBP beta binding of DNA. Nucleic Acids Res., 47, 2019
1GTW	crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoter Descriptor: 5'-D(*AP*AP*TP*GP*TP*GP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3', 5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*CP*AP*CP*AP*T)-3', CAAT/ENHANCER BINDING PROTEIN BETA Authors: Tahirov, T.H, Ogata, K. Deposit date: 2002-01-22 Release date: 2004-02-06 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural Basis for Flexible Base Recognition by C/Ebpbeta To be Published
1IO4	CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER Descriptor: CAAT/ENHANCER BINDING PROTEIN BETA, CORE-BINDING FACTOR, BETA SUBUNIT, ... Authors: Tahirov, T.H, Ogata, K. Deposit date: 2001-01-10 Release date: 2001-03-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural analyses of DNA recognition by the AML1/Runx-1 Runt domain and its allosteric control by CBFbeta. Cell(Cambridge,Mass.), 104, 2001
1CI6	TRANSCRIPTION FACTOR ATF4-C/EBP BETA BZIP HETERODIMER Descriptor: BETA-MERCAPTOETHANOL, FE (III) ION, TRANSCRIPTION FACTOR ATF-4, ... Authors: Podust, L.M, Kim, Y. Deposit date: 1999-04-07 Release date: 2000-12-04 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of the CCAAT box/enhancer-binding protein beta activating transcription factor-4 basic leucine zipper heterodimer in the absence of DNA J.Biol.Chem., 276, 2001