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7TH2
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BU of 7th2 by Molmil
Single-domain VHH intrabodies neutralize ricin toxin
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Rudolph, M.J, Mantis, N.
Deposit date:2022-01-10
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.838 Å)
Cite:Single-domain antibodies neutralize ricin toxin intracellularly by blocking access to ribosomal P-stalk proteins.
J.Biol.Chem., 298, 2022
4FBA
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BU of 4fba by Molmil
Structure of mutant RIP from barley seeds in complex with adenine
Descriptor: ADENINE, Protein synthesis inhibitor I
Authors:Lee, B.-G, Kim, M.K, Suh, S.W, Song, H.K.
Deposit date:2012-05-22
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of the ribosome-inactivating protein from barley seeds reveal a unique activation mechanism.
Acta Crystallogr.,Sect.D, 68, 2012
3U6T
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BU of 3u6t by Molmil
Crystal structure of the complex of type I Ribosome inactivating protein in complex with Kanamycin at 1.85 A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, KANAMYCIN A, ...
Authors:Yamini, S, Pandey, S, Kushwaha, G.S, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-10-13
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the complex of type I Ribosome inactivating protein in complex with Kanamycin at 1.85 A
To be Published
4JTP
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BU of 4jtp by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Ascorbic acid at 1.85 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ASCORBIC ACID, rRNA N-glycosidase
Authors:Pandey, S, Bhushan, A, Singh, A, Tyagi, T.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-03-24
Release date:2013-04-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Ascorbic acid at 1.85 Angstrom resolution
TO BE PUBLISHED
1QD2
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BU of 1qd2 by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF TRICHOSANTHIN WITH ADENINE, OBTAINED FROM TRICHOSANTHIN COMPLEXED WITH THE DINUCLEOTIDE APG
Descriptor: ADENINE, TRICHOSANTHIN
Authors:Gu, Y.J, Xia, Z.X.
Deposit date:1999-07-09
Release date:2000-04-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structures of the complexes of trichosanthin with four substrate analogs and catalytic mechanism of RNA N-glycosidase.
Proteins, 39, 2000
4HV7
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BU of 4hv7 by Molmil
Structure of ricin A chain bound with N-(N-(pterin-7-yl)carbonylglycyl)glycine
Descriptor: 2-[2-[(2-azanyl-4-oxidanylidene-1H-pteridin-7-yl)carbonylamino]ethanoylamino]ethanoic acid, MALONIC ACID, Ricin, ...
Authors:Jasheway, K.R, Monzingo, A.F, Saito, R, Pruet, J.M, Manzano, L.A, Wiget, P.A, Anslyn, E.V, Robertus, J.D.
Deposit date:2012-11-05
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.869 Å)
Cite:Peptide-conjugated pterins as inhibitors of ricin toxin A.
J.Med.Chem., 56, 2013
4ESI
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BU of 4esi by Molmil
Structure of ricin A chain bound with N-((1H-1,2,3-triazol-4-yl)methyl-2-amino-4-oxo-3,4-dihydropteridine-7-carboxamide
Descriptor: 2-amino-4-oxo-N-(1H-1,2,3-triazol-5-ylmethyl)-1,4-dihydropteridine-7-carboxamide, Ricin
Authors:Jasheway, K.R, Pruet, J.M, Ryoto, S, Manzano, L.A, Wiget, P.A, Kamat, I, Anslyn, E.V, Monzingo, A.F, Robertus, J.D.
Deposit date:2012-04-23
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Optimized 5-membered heterocycle-linked pterins for the inhibition of Ricin Toxin A.
ACS Med Chem Lett, 3, 2012
5CIX
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BU of 5cix by Molmil
Structure of the complex of type 1 Ribosome inactivating protein with triethanolamine at 1.88 Angstrom resolution
Descriptor: 2,2',2''-NITRILOTRIETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, ...
Authors:Singh, P.K, Pandey, S, Tyagi, T.K, Singh, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2015-07-13
Release date:2015-08-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure of the complex of type 1 Ribosome inactivating protein with triethanolamine at 1.88 Angstrom resolution.
To Be Published
6X6H
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BU of 6x6h by Molmil
Structure of Shiga toxin 2 with a C-terminal peptide of ribosomal P stalk proteins
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Rudolph, M.J.
Deposit date:2020-05-28
Release date:2020-09-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural basis for the interaction of Shiga toxin 2a with a C-terminal peptide of ribosomal P stalk proteins.
J.Biol.Chem., 295, 2020
3PX9
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BU of 3px9 by Molmil
RTA in complex with N-(furanylmethyl)-7-carbamoyl-pterin
Descriptor: 2-amino-N-(furan-2-ylmethyl)-4-oxo-3,4-dihydropteridine-7-carboxamide, Preproricin
Authors:Jasheway, K.R, Robertus, J.D.
Deposit date:2010-12-09
Release date:2011-06-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:7-Substituted pterins provide a new direction for ricin A chain inhibitors.
Eur.J.Med.Chem., 46, 2011
1M2T
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BU of 1m2t by Molmil
Mistletoe Lectin I from Viscum album in Complex with Adenine Monophosphate. Crystal Structure at 1.9 A Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, GLYCEROL, ...
Authors:Krauspenhaar, R, Rypniewski, W, Kalkura, N, Moore, K, DeLucas, L, Stoeva, S, Mikhailov, A, Voelter, W, Betzel, C.
Deposit date:2002-06-25
Release date:2003-06-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystallisation under microgravity of mistletoe lectin I from Viscum album with adenine monophosphate and the crystal structure at 1.9 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
4KL4
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BU of 4kl4 by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Polyethylene glycol at 1.90 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Pandey, S, Tyagi, T.K, Singh, A, Bhushan, A, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-05-07
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Polyethylene glycol at 1.90 Angstrom resolution
To be Published
5WV1
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BU of 5wv1 by Molmil
Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with ribose sugar at 1.90 A resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Shokeen, A, Singh, P.K, Pandey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-12-21
Release date:2017-01-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with ribose sugar at 1.90 A resolution.
To Be Published
7VHE
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BU of 7vhe by Molmil
Crystal structure of the STX2a complexed with RRRA peptide
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, GLYCEROL, RRRA peptide, ...
Authors:Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
Deposit date:2021-09-22
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
1J1R
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BU of 1j1r by Molmil
Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Adenine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, Antiviral Protein S
Authors:Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
Deposit date:2002-12-14
Release date:2004-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
3N5D
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BU of 3n5d by Molmil
Crystal structure of the complex of type I ribosome inactivating protein with glucose at 1.9A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Pandey, N, Kushwaha, G.S, Sinha, M, Kaur, P, Betzel, C, Sharma, S, Singh, T.P.
Deposit date:2010-05-25
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the complex of type I ribosome inactivating protein with glucose at 1.9A resolution
To be Published
1UQ4
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BU of 1uq4 by Molmil
RICIN A-CHAIN (RECOMBINANT) R213D MUTANT
Descriptor: RICIN, SULFATE ION
Authors:Marsden, C.J, Fulop, V.
Deposit date:2003-10-15
Release date:2004-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Effect of Mutations Surrounding and within the Active Site on the Catalytic Activity of Ricin a Chain
Eur.J.Biochem., 271, 2004
6OBO
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BU of 6obo by Molmil
Ricin A chain bound to VHH antibody V6A6
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ...
Authors:Rudolph, M.J.
Deposit date:2019-03-21
Release date:2020-04-01
Last modified:2020-10-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Intracellular Neutralization of Ricin Toxin by Single-domain Antibodies Targeting the Active Site.
J.Mol.Biol., 432, 2020
3KU0
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BU of 3ku0 by Molmil
Structure of GAP31 with adenine at its binding pocket
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, Ribosome-inactivating protein gelonin
Authors:Kong, X.-P.
Deposit date:2009-11-26
Release date:2010-01-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A new activity of anti-HIV and anti-tumor protein GAP31: DNA adenosine glycosidase--structural and modeling insight into its functions.
Biochem.Biophys.Res.Commun., 391, 2010
3RL9
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BU of 3rl9 by Molmil
Crystal Structure of the complex of type I RIP with the hydrolyzed product of dATP, adenine at 1.9 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENINE, GLYCEROL, ...
Authors:Kushwaha, G.S, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-04-19
Release date:2011-05-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of a type-1 ribosome inactivating protein from Momordica balsamina in the bound and unbound states
Biochim.Biophys.Acta, 1824, 2012
8CX8
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BU of 8cx8 by Molmil
Stx2A1-BTB13086
Descriptor: 1,2-ETHANEDIOL, 5-(4-chlorophenyl)furan-2-carboxylic acid, CHLORIDE ION, ...
Authors:Rudolph, M.J, Li, X.P.
Deposit date:2022-05-20
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.905 Å)
Cite:Stx2A1-BTB13086
To Be Published
1NLI
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BU of 1nli by Molmil
Complex of [E160A-E189A] trichosanthin and adenine
Descriptor: ADENINE, Ribosome-inactivating protein alpha-trichosanthin
Authors:Shaw, P.C, Wong, K.B, Chan, D.S.B, Williams, R.L.
Deposit date:2003-01-07
Release date:2003-01-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural basis for the interaction of [E160A-E189A]-trichosanthin with adenine.
Toxicon, 41, 2003
2P8N
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BU of 2p8n by Molmil
Ricin a-chain (recombinant) complex with adenine
Descriptor: ADENINE, Ricin A chain, SULFATE ION
Authors:Carra, J.H, Mchugh, C.A, Mulligan, S, Machiesky, L.M, Millard, C.B.
Deposit date:2007-03-22
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site
BMC Struct.Biol., 7, 2007
4EB2
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BU of 4eb2 by Molmil
Crystal structure Mistletoe Lectin I from Viscum album in complex with n-acetyl-d-glucosamine at 1.94 A resolution.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Laskov, A.A, Prokofev, I.I, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:2012-03-23
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure Mistletoe Lectin I from Viscum album in complex with N-acetyl-D-glucosamine at 1.94 A resolution.
To be Published
5GZ7
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BU of 5gz7 by Molmil
Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Tiwari, P, Pandey, S.N, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-09-26
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution.
To Be Published

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