Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8U93
DownloadVisualize
BU of 8u93 by Molmil
Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (PEG bound)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-18
Release date:2023-09-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (PEG bound)
To be published
8U92
DownloadVisualize
BU of 8u92 by Molmil
Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound, Orthorhombic P form)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-09-18
Release date:2023-09-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound, Orthorhombic P form)
To be published
8UR1
DownloadVisualize
BU of 8ur1 by Molmil
Crystal structure N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound halide free active site)
Descriptor: CHLORIDE ION, GLYCEROL, N-acetylneuraminate lyase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-10-25
Release date:2023-11-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound halide free active site)
To be published
6U01
DownloadVisualize
BU of 6u01 by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84D mutant with pyruvate bound in the active site
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Majdi Yazdi, M, Lehnert, L, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2019-08-13
Release date:2019-12-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Asparagine-84, a regulatory allosteric site residue, helps maintain the quaternary structure of Campylobacter jejuni dihydrodipicolinate synthase.
J.Struct.Biol., 209, 2020
4UR7
DownloadVisualize
BU of 4ur7 by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with pyruvate
Descriptor: FORMIC ACID, GLYCEROL, KETO-DEOXY-D-GALACTARATE DEHYDRATASE
Authors:Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
Deposit date:2014-06-26
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase.
Biochemistry, 53, 2014
6TZU
DownloadVisualize
BU of 6tzu by Molmil
Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84A mutant with pyruvate bound in the active site
Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ...
Authors:Saran, S, Majdi Yazdi, M, Lehnert, C, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2019-08-13
Release date:2019-12-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Asparagine-84, a regulatory allosteric site residue, helps maintain the quaternary structure of Campylobacter jejuni dihydrodipicolinate synthase.
J.Struct.Biol., 209, 2020
1YXD
DownloadVisualize
BU of 1yxd by Molmil
Structure of E. coli dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine to 2.0 A
Descriptor: CHLORIDE ION, LYSINE, POTASSIUM ION, ...
Authors:Dobson, R.C.J, Griffin, M.D.W, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-02-20
Release date:2005-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structures of native and (S)-lysine-bound dihydrodipicolinate synthase from Escherichia coli with improved resolution show new features of biological significance.
Acta Crystallogr.,Sect.D, 61, 2005
1YXC
DownloadVisualize
BU of 1yxc by Molmil
Structure of E. coli dihydrodipicolinate synthase to 1.9 A
Descriptor: CHLORIDE ION, POTASSIUM ION, dihydrodipicolinate synthase
Authors:Dobson, R.C.J, Griffin, M.D.W, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-02-20
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structures of native and (S)-lysine-bound dihydrodipicolinate synthase from Escherichia coli with improved resolution show new features of biological significance.
Acta Crystallogr.,Sect.D, 61, 2005
4UUI
DownloadVisualize
BU of 4uui by Molmil
A case study for twinned data analysis: multiple crystal forms of the enzyme N-acetyl-neuraminic lyase
Descriptor: N-ACETYLNEURAMINATE LYASE, PENTAETHYLENE GLYCOL, PYRUVIC ACID, ...
Authors:Campeotto, I, Phillips, S.E.V, Pearson, A.R.
Deposit date:2014-07-29
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A Case Study for Twinned Data Analysis: Multiple Crystal Forms of the Enzyme N-Acetyl-Neuraminic Lyase
To be Published
4UR8
DownloadVisualize
BU of 4ur8 by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with 2-oxoadipic acid
Descriptor: 2-OXOADIPIC ACID, FORMIC ACID, KETO-DEOXY-D-GALACTARATE DEHYDRATASE
Authors:Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
Deposit date:2014-06-26
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase.
Biochemistry, 53, 2014
4UXD
DownloadVisualize
BU of 4uxd by Molmil
2-keto 3-deoxygluconate aldolase from Picrophilus torridus
Descriptor: 1,2-ETHANEDIOL, 2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE ALDOLASE, DI(HYDROXYETHYL)ETHER, ...
Authors:Priftis, A, Zaitsev, V, Reher, M, Johnsen, U, Danson, M.J, Taylor, G.L, Schoenheit, P, Crennell, S.J.
Deposit date:2014-08-22
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate.
Biochemistry, 57, 2018
4WOQ
DownloadVisualize
BU of 4woq by Molmil
Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
Descriptor: 2-KETOBUTYRIC ACID, N-acetylneuraminate lyase
Authors:Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M.
Deposit date:2014-10-16
Release date:2015-10-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
to be published
4WOZ
DownloadVisualize
BU of 4woz by Molmil
Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine
Descriptor: 2-(ACETYLAMINO)-2-DEOXY-D-MANNOSE, N-acetylneuraminate lyase
Authors:Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M.
Deposit date:2014-10-17
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine
to be published
2A6L
DownloadVisualize
BU of 2a6l by Molmil
Dihydrodipicolinate synthase (E. coli)- mutant R138H
Descriptor: Dihydrodipicolinate synthase, POTASSIUM ION
Authors:Dobson, R.C, Devenish, S.R, Turner, L.A, Clifford, V.R, Pearce, F.G, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-07-03
Release date:2005-10-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Role of Arginine 138 in the Catalysis and Regulation of Escherichia coli Dihydrodipicolinate Synthase.
Biochemistry, 44, 2005
2A6N
DownloadVisualize
BU of 2a6n by Molmil
Dihydrodipicolinate synthase (E. coli)- mutant R138A
Descriptor: Dihydrodipicolinate synthase, POTASSIUM ION
Authors:Dobson, R.C, Devenish, S.R, Turner, L.A, Clifford, V.R, Pearce, F.G, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-07-03
Release date:2005-10-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Role of Arginine 138 in the Catalysis and Regulation of Escherichia coli Dihydrodipicolinate Synthase.
Biochemistry, 44, 2005
2ATS
DownloadVisualize
BU of 2ats by Molmil
Dihydrodipicolinate synthase co-crystallised with (S)-lysine
Descriptor: CHLORIDE ION, D-LYSINE, POTASSIUM ION, ...
Authors:Devenish, S.R.A, Dobson, R.C.J, Jameson, G.B, Gerrard, J.A.
Deposit date:2005-08-26
Release date:2006-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The co-crystallisation of (S)-lysine-bound dihydrodipicolinate synthase from E. coli indicates that domain movements are not responsible for (S)-lysine inhibition
To be published
6VVI
DownloadVisualize
BU of 6vvi by Molmil
Arabidopsis thaliana dihydrodipicolinate synthase isoform 1 (DHDPS1)
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic, GLYCEROL, ...
Authors:Lee, M, Hall, C.J.
Deposit date:2020-02-18
Release date:2021-02-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.145 Å)
Cite:Differential lysine-mediated allosteric regulation of plant dihydrodipicolinate synthase isoforms.
Febs J., 288, 2021
6VVH
DownloadVisualize
BU of 6vvh by Molmil
Arabidopsis thaliana dihydrodipicolinate synthase isoform 1 (DHDPS1) in complex with lysine
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic, ...
Authors:Lee, M, Hall, C.J.
Deposit date:2020-02-18
Release date:2021-02-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Differential lysine-mediated allosteric regulation of plant dihydrodipicolinate synthase isoforms.
Febs J., 288, 2021
6XGS
DownloadVisualize
BU of 6xgs by Molmil
Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, CITRIC ACID, PHOSPHATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-06-18
Release date:2020-07-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330
to be published
2EHH
DownloadVisualize
BU of 2ehh by Molmil
Crystal structure of dihydrodipicolinate synthase from aquifex aeolicus
Descriptor: Dihydrodipicolinate synthase, PHOSPHATE ION
Authors:Kumarevel, T.S, Karthe, P, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-06
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of dihydrodipicolinate synthase from aquifex aeolicus
To be Published
4HNN
DownloadVisualize
BU of 4hnn by Molmil
Dihydrodipicolinate Synthase from the common grapevine with pyruvate and lysine
Descriptor: Dihydrodipicolinate synthase, LYSINE
Authors:Atkinson, S.C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-10-19
Release date:2013-09-04
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural, kinetic and computational investigation of Vitis vinifera DHDPS reveals new insight into the mechanism of lysine-mediated allosteric inhibition.
Plant Mol.Biol., 81, 2013
1W3T
DownloadVisualize
BU of 1w3t by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDGal, D-Glyceraldehyde and pyruvate
Descriptor: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, 3-DEOXY-D-LYXO-HEXONIC ACID, D-Glyceraldehyde, ...
Authors:Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L.
Deposit date:2004-07-19
Release date:2004-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus.
J. Biol. Chem., 279, 2004
1W37
DownloadVisualize
BU of 1w37 by Molmil
2-keto-3-deoxygluconate(KDG) aldolase of Sulfolobus solfataricus
Descriptor: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, GLYCEROL, SODIUM ION
Authors:Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L.
Deposit date:2004-07-13
Release date:2004-09-02
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus.
J. Biol. Chem., 279, 2004
1W3N
DownloadVisualize
BU of 1w3n by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDG
Descriptor: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, 3-DEOXY-D-ARABINO-HEXONIC ACID, GLYCEROL
Authors:Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L.
Deposit date:2004-07-17
Release date:2004-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus.
J. Biol. Chem., 279, 2004
1W3I
DownloadVisualize
BU of 1w3i by Molmil
Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with pyruvate
Descriptor: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, GLYCEROL, PYRUVIC ACID
Authors:Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L.
Deposit date:2004-07-15
Release date:2004-09-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus.
J. Biol. Chem., 279, 2004

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon