Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MPC
DownloadVisualize
BU of 5mpc by Molmil
26S proteasome in presence of BeFx (s4)
Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
Authors:Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
Deposit date:2016-12-16
Release date:2017-03-08
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MPA
DownloadVisualize
BU of 5mpa by Molmil
26S proteasome in presence of ATP (s2)
Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
Authors:Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
Deposit date:2016-12-16
Release date:2017-03-08
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3CF3
DownloadVisualize
BU of 3cf3 by Molmil
Structure of P97/vcp in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
Deposit date:2008-03-01
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.25 Å)
Cite:Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
3CF1
DownloadVisualize
BU of 3cf1 by Molmil
Structure of P97/vcp in complex with ADP/ADP.alfx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Transitional endoplasmic reticulum ATPase
Authors:Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
Deposit date:2008-03-01
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
5MP9
DownloadVisualize
BU of 5mp9 by Molmil
26S proteasome in presence of ATP (s1)
Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
Authors:Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
Deposit date:2016-12-16
Release date:2017-03-08
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MPB
DownloadVisualize
BU of 5mpb by Molmil
26S proteasome in presence of AMP-PNP (s3)
Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
Authors:Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
Deposit date:2016-12-16
Release date:2017-03-08
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3CF0
DownloadVisualize
BU of 3cf0 by Molmil
Structure of D2 subdomain of P97/VCP in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Davies, J.M, Brunger, A.T, Weis, W.I.
Deposit date:2008-03-01
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Improved Structures of Full-Length p97, an AAA ATPase: Implications for Mechanisms of Nucleotide-Dependent Conformational Change.
Structure, 16, 2008
4HSE
DownloadVisualize
BU of 4hse by Molmil
Crystal structure of ClpB NBD1 in complex with guanidinium chloride and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Chaperone protein ClpB, ...
Authors:Zeymer, C, Werbeck, N.D, Schlichting, I, Reinstein, J.
Deposit date:2012-10-30
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The molecular mechanism of hsp100 chaperone inhibition by the prion curing agent guanidinium chloride.
J.Biol.Chem., 288, 2013
3D8B
DownloadVisualize
BU of 3d8b by Molmil
Crystal structure of human fidgetin-like protein 1 in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Fidgetin-like protein 1
Authors:Karlberg, T, Wisniewska, M, Andersson, J, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Welin, M, Wikstrom, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2008-05-23
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human fidgetin-like protein 1.
To be Published
3EIH
DownloadVisualize
BU of 3eih by Molmil
Crystal structure of S.cerevisiae Vps4 in the presence of ATPgammaS
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Gonciarz, M.D, Whitby, F.G, Eckert, D.M, Kieffer, C, Heroux, A, Sundquist, W.I, Hill, C.P.
Deposit date:2008-09-15
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Biochemical and structural studies of yeast vps4 oligomerization.
J.Mol.Biol., 384, 2008
1QVR
DownloadVisualize
BU of 1qvr by Molmil
Crystal Structure Analysis of ClpB
Descriptor: ClpB protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLATINUM (II) ION
Authors:Lee, S, Sowa, M.E, Watanabe, Y, Sigler, P.B, Chiu, W, Yoshida, M, Tsai, F.T.F.
Deposit date:2003-08-28
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of ClpB: A Molecular Chaperone that Rescues Proteins from an Aggregated State
Cell(Cambridge,Mass.), 115, 2003
5OFO
DownloadVisualize
BU of 5ofo by Molmil
Cryo EM structure of the E. coli disaggregase ClpB (BAP form, DWB mutant), in the ATPgammaS state, bound to the model substrate casein
Descriptor: Chaperone protein ClpB,ATP-dependent Clp protease ATP-binding subunit ClpA,Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Deville, C, Carroni, M, Franke, K.B, Topf, M, Bukau, B, Mogk, A, Saibil, H.R.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural pathway of regulated substrate transfer and threading through an Hsp100 disaggregase.
Sci Adv, 3, 2017
1R6B
DownloadVisualize
BU of 1r6b by Molmil
High resolution crystal structure of ClpA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ClpA protein, MAGNESIUM ION
Authors:Xia, D, Maurizi, M.R, Guo, F, Singh, S.K, Esser, L.
Deposit date:2003-10-15
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic investigation of peptide binding sites in the N-domain of the ClpA chaperone.
J.Struct.Biol., 146, 2004
3EIE
DownloadVisualize
BU of 3eie by Molmil
Crystal Structure of S.cerevisiae Vps4 in the SO4-bound state
Descriptor: SULFATE ION, Vacuolar protein sorting-associated protein 4
Authors:Gonciarz, M.D, Whitby, F.G, Eckert, D.M, Kieffer, C, Heroux, A, Sundquist, W.I, Hill, C.P.
Deposit date:2008-09-15
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biochemical and structural studies of yeast vps4 oligomerization.
J.Mol.Biol., 384, 2008
5OG1
DownloadVisualize
BU of 5og1 by Molmil
Cryo EM structure of the E. coli disaggregase ClpB (BAP form, DWB mutant), in the ATPgammaS state
Descriptor: Chaperone protein ClpB,ATP-dependent Clp protease ATP-binding subunit ClpA,Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Deville, C, Carroni, M, Franke, K.B, Topf, M, Bukau, B, Mogk, A, Saibil, H.R.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2019-08-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural pathway of regulated substrate transfer and threading through an Hsp100 disaggregase.
Sci Adv, 3, 2017
1R7R
DownloadVisualize
BU of 1r7r by Molmil
The crystal structure of murine p97/VCP at 3.6A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Huyton, T, Pye, V.E, Briggs, L.C, Flynn, T.C, Beuron, F, Kondo, H, Ma, J, Zhang, X, Freemont, P.S.
Deposit date:2003-10-22
Release date:2003-12-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The crystal structure of murine p97/VCP at 3.6A
J.Struct.Biol., 144, 2003
1S3S
DownloadVisualize
BU of 1s3s by Molmil
Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)- ATPase p97 subunit) (Valosin containing protein) (VCP) [Contains: Valosin], p47 protein
Authors:Dreveny, I, Kondo, H, Uchiyama, K, Shaw, A, Zhang, X, Freemont, P.S.
Deposit date:2004-01-14
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of the interaction between the AAA ATPase p97/VCP and its adaptor protein p47.
Embo J., 23, 2004
4KO8
DownloadVisualize
BU of 4ko8 by Molmil
Structure of p97 N-D1 R155H mutant in complex with ATPgS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Xia, D, Tang, W.K.
Deposit date:2013-05-11
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
4KOD
DownloadVisualize
BU of 4kod by Molmil
Structure of p97 N-D1 R155H mutant in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Xia, D, Tang, W.K.
Deposit date:2013-05-11
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
4KLN
DownloadVisualize
BU of 4kln by Molmil
Structure of p97 N-D1 A232E mutant in complex with ATPgS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Xia, D, Tang, W.K.
Deposit date:2013-05-07
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants.
J.Biol.Chem., 288, 2013
1SXJ
DownloadVisualize
BU of 1sxj by Molmil
Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Activator 1 37 kDa subunit, Activator 1 40 kDa subunit, ...
Authors:Bowman, G.D, O'Donnell, M, Kuriyan, J.
Deposit date:2004-03-30
Release date:2004-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex.
Nature, 429, 2004
4L15
DownloadVisualize
BU of 4l15 by Molmil
Crystal structure of FIGL-1 AAA domain
Descriptor: Fidgetin-like protein 1, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Peng, W, Lin, Z, Li, W, Lu, J, Shen, Y, Wang, C.
Deposit date:2013-06-02
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the unusually strong ATPase activity of the AAA domain of the Caenorhabditis elegans fidgetin-like 1 (FIGL-1) protein.
J.Biol.Chem., 288, 2013
4L16
DownloadVisualize
BU of 4l16 by Molmil
Crystal structure of FIGL-1 AAA domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Fidgetin-like protein 1
Authors:Peng, W, Lin, Z, Li, W, Lu, J, Shen, Y, Wang, C.
Deposit date:2013-06-02
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the unusually strong ATPase activity of the AAA domain of the Caenorhabditis elegans fidgetin-like 1 (FIGL-1) protein.
J.Biol.Chem., 288, 2013
4LCB
DownloadVisualize
BU of 4lcb by Molmil
Structure of Vps4 homolog from Acidianus hospitalis
Descriptor: CHLORIDE ION, Cell division protein CdvC, Vps4
Authors:Han, H, Hill, C.P, Whitby, F.G, Monroe, N.
Deposit date:2013-06-21
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The Oligomeric State of the Active Vps4 AAA ATPase.
J.Mol.Biol., 426, 2014
4LGM
DownloadVisualize
BU of 4lgm by Molmil
Crystal Structure of Sulfolobus solfataricus Vps4
Descriptor: CHLORIDE ION, Vps4 AAA ATPase
Authors:Han, H, Hill, C.P, Whitby, F.G, Monroe, N.
Deposit date:2013-06-28
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.711 Å)
Cite:The Oligomeric State of the Active Vps4 AAA ATPase.
J.Mol.Biol., 426, 2014

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon