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4A1F
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BU of 4a1f by Molmil
Crystal structure of C-terminal domain of Helicobacter pylori DnaB Helicase
Descriptor: CITRATE ANION, REPLICATIVE DNA HELICASE
Authors:Stelter, M, Kapp, U, Timmins, J, Terradot, L.
Deposit date:2011-09-14
Release date:2012-03-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Architecture of a Dodecameric Bacterial Replicative Helicase.
Structure, 20, 2012
3BH0
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BU of 3bh0 by Molmil
ATPase Domain of G40P
Descriptor: DNAB-LIKE REPLICATIVE HELICASE
Authors:Wang, G, Klein, M.G, Tokonzaba, E, Zhang, Y, Holden, L.G, Chen, X.S.
Deposit date:2007-11-27
Release date:2007-12-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of a DnaB-family replicative helicase and its interactions with primase.
Nat.Struct.Mol.Biol., 15, 2008
1CR1
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BU of 1cr1 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTTP
Descriptor: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-TRIPHOSPHATE
Authors:Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
Deposit date:1999-08-12
Release date:1999-11-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR4
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BU of 1cr4 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTDP
Descriptor: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-DIPHOSPHATE
Authors:Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
Deposit date:1999-08-12
Release date:1999-11-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR2
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BU of 1cr2 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA PRIMASE/HELICASE, SULFATE ION
Authors:Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
Deposit date:1999-08-12
Release date:1999-11-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR0
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BU of 1cr0 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE4 PROTEIN OF BACTERIOPHAGE T7
Descriptor: DNA PRIMASE/HELICASE, SULFATE ION
Authors:Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
Deposit date:1999-08-12
Release date:1999-11-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1E0K
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BU of 1e0k by Molmil
gp4d helicase from phage T7
Descriptor: DNA HELICASE
Authors:Singleton, M.R, Sawaya, M.R, Ellenberger, T, Wigley, D.B.
Deposit date:2000-03-30
Release date:2000-06-09
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of T7 Gene 4 Ring Helicase Indicates a Mechanism for Sequential Hydrolysis of Nucleotides
Cell(Cambridge,Mass.), 101, 2000
1E0J
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BU of 1e0j by Molmil
gp4d helicase from phage T7 ADPNP complex
Descriptor: DNA HELICASE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Singleton, M.R, Sawaya, M.R, Ellenberger, T, Wigley, D.B.
Deposit date:2000-03-30
Release date:2000-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of T7 Gene 4 Ring Helicase Indicates a Mechanism for Sequential Hydrolysis of Nucleotides
Cell(Cambridge,Mass.), 101, 2000
8DTP
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BU of 8dtp by Molmil
Close state of T4 bacteriophage gp41 hexamer bound with single strand DNA
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DnaB-like replicative helicase, MAGNESIUM ION, ...
Authors:Feng, X, Li, H.
Deposit date:2022-07-26
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DUE
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BU of 8due by Molmil
Open state of T4 bacteriophage gp41 hexamer bound with single strand DNA
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DnaB-like replicative helicase, MAGNESIUM ION, ...
Authors:Feng, X, Li, H.
Deposit date:2022-07-27
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DVF
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BU of 8dvf by Molmil
T4 Bacteriophage primosome with single strand DNA, state 1
Descriptor: DNA (5'-D(P*GP*GP*CP*TP*G)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA primase, ...
Authors:Feng, X, Li, H.
Deposit date:2022-07-28
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DW6
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BU of 8dw6 by Molmil
T4 bacteriophage primosome with single-strand DNA, State 3
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (70-MER), DNA primase, ...
Authors:Feng, X, Li, H.
Deposit date:2022-07-31
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DUO
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BU of 8duo by Molmil
DNA-free T4 Bacteriophage gp41 hexamer
Descriptor: DnaB-like replicative helicase, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Feng, X, Li, H.
Deposit date:2022-07-27
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8DVI
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BU of 8dvi by Molmil
T4 bacteriophage primosome with single strand DNA, State 2
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (70-MER), DNA primase, ...
Authors:Feng, X, Li, H.
Deposit date:2022-07-29
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8GAO
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BU of 8gao by Molmil
bacteriophage T4 stalled primosome with mutant gp41-E227Q
Descriptor: DNA (70-mer), DNA primase, DnaB-like replicative helicase, ...
Authors:Feng, X, Li, H.
Deposit date:2023-02-23
Release date:2023-06-07
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
8G0Z
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BU of 8g0z by Molmil
Mutant bacteriophage T4 gp41 helicase hexamer bound with single strand DNA and ATPgammaS in the stalled primosome
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DnaB-like replicative helicase, MAGNESIUM ION, ...
Authors:Feng, X, Li, H.
Deposit date:2023-02-01
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
6KZA
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BU of 6kza by Molmil
Crystal structure of the complex of the interaction domains of E. coli DnaB helicase and DnaC helicase loader
Descriptor: DNA replication protein DnaC, Replicative DNA helicase
Authors:Nagata, K, Okada, A, Ohtsuka, J, Ohkuri, T, Akama, Y, Sakiyama, Y, Miyazaki, E, Horita, S, Katayama, T, Ueda, T, Tanokura, M.
Deposit date:2019-09-23
Release date:2019-11-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the complex of the interaction domains of Escherichia coli DnaB helicase and DnaC helicase loader: structural basis implying a distortion-accumulation mechanism for the DnaB ring opening caused by DnaC binding.
J.Biochem., 167, 2020
6FRH
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BU of 6frh by Molmil
Crystal structure of Ssp DnaB Mini-Intein variant M86
Descriptor: Replicative DNA helicase,Replicative DNA helicase
Authors:Popp, M.A, Blankenfeldt, W, Gazdag, M.E, Matern, J.J.C, Mootz, H.D.
Deposit date:2018-02-15
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidine.
Chem Sci, 10, 2019
6FRE
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BU of 6fre by Molmil
Crystal structure of G-1F/H73A mutant of Ssp DnaB Mini-Intein variant M86
Descriptor: Replicative DNA helicase,Replicative DNA helicase
Authors:Popp, M.A, Blankenfeldt, W, Friedel, K, Mootz, H.D.
Deposit date:2018-02-15
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidine.
Chem Sci, 10, 2019
6FRG
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BU of 6frg by Molmil
Crystal structure of G-1F mutant of Ssp DnaB Mini-Intein variant M86
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, Replicative DNA helicase, ...
Authors:Popp, M.A, Blankenfeldt, W, Friedel, K, Mootz, H.D.
Deposit date:2018-02-15
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.535 Å)
Cite:A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidine.
Chem Sci, 10, 2019
4ESV
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BU of 4esv by Molmil
A New Twist on the Translocation Mechanism of Helicases from the Structure of DnaB with its Substrates
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', ...
Authors:Itsathitphaisarn, O, Wing, R.A, Eliason, W.K, Wang, J, Steitz, T.A.
Deposit date:2012-04-23
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Hexameric Helicase DnaB Adopts a Nonplanar Conformation during Translocation.
Cell(Cambridge,Mass.), 151, 2012
8A3V
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BU of 8a3v by Molmil
Crystal structure of the Vibrio cholerae replicative helicase (VcDnaB) in complex with its loader protein (VcDciA)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DUF721 domain-containing protein, MAGNESIUM ION, ...
Authors:Walbott, H, Quevillon-Cheruel, S, Cargemel, C.
Deposit date:2022-06-09
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The LH-DH module of bacterial replicative helicases is the common binding site for DciA and other helicase loaders.
Acta Crystallogr D Struct Biol, 79, 2023
6T66
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BU of 6t66 by Molmil
Crystal structure of the Vibrio cholerae replicative helicase (DnaB) with GDP-AlF4
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Replicative DNA helicase, ...
Authors:Legrand, P, Quevillon-Cheruel, S, Li de la Sierra-Gallay, I, Walbott, H.
Deposit date:2019-10-17
Release date:2021-04-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Study of the DnaB:DciA interplay reveals insights into the primary mode of loading of the bacterial replicative helicase.
Nucleic Acids Res., 49, 2021
5IKN
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BU of 5ikn by Molmil
Crystal Structure of the T7 Replisome in the Absence of DNA
Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, Thioredoxin-1
Authors:Wallen, J.R, Ellenberger, T.
Deposit date:2016-03-03
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.802 Å)
Cite:Hybrid Methods Reveal Multiple Flexibly Linked DNA Polymerases within the Bacteriophage T7 Replisome.
Structure, 25, 2017
4ZC0
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BU of 4zc0 by Molmil
Structure of a dodecameric bacterial helicase
Descriptor: HEXATANTALUM DODECABROMIDE, Replicative DNA helicase
Authors:Bazin, A, Cherrier, M.V, Gutsche, I, Timmins, J, Terradot, L.
Deposit date:2015-04-15
Release date:2015-10-21
Method:X-RAY DIFFRACTION (6.7 Å)
Cite:Structure and primase-mediated activation of a bacterial dodecameric replicative helicase.
Nucleic Acids Res., 43, 2015

 

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數據於2024-03-27公開中

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