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1FSE
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CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS REGULATORY PROTEIN GERE
Descriptor: GERE, GLYCEROL, SULFATE ION
Authors:Ducros, V.M.-A, Lewis, R.J, Verma, C.S, Dodson, E.J, Leonard, G, Turkenburg, J.P, Murshudov, G.N, Wilkinson, A.J, Brannigan, J.A.
Deposit date:2000-09-08
Release date:2001-03-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of GerE, the ultimate transcriptional regulator of spore formation in Bacillus subtilis.
J.Mol.Biol., 306, 2001
6JQS
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Structure of Transcription factor, GerE
Descriptor: DNA-binding response regulator
Authors:Lee, J.H, Lee, C.W.
Deposit date:2019-04-01
Release date:2019-04-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of a transcription factor, GerE (PaGerE), from spore-forming bacterium Paenisporosarcina sp. TG-14.
Biochem.Biophys.Res.Commun., 513, 2019
1P4W
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BU of 1p4w by Molmil
Solution structure of the DNA-binding domain of the Erwinia amylovora RcsB protein
Descriptor: rcsB
Authors:Pristovsek, P, Sengupta, K, Loehr, F, Schaefer, B, Wehland von Trebra, M, Rueterjans, H, Bernhard, F.
Deposit date:2003-04-24
Release date:2003-06-17
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural analysis of the DNA-binding domain of the Erwinia amylovora RcsB protein and its interaction with the RcsAB box.
J.Biol.Chem., 278, 2003
1X3U
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BU of 1x3u by Molmil
Solution structure of the C-terminal transcriptional activator domain of FixJ from Sinorhizobium melilot
Descriptor: Transcriptional regulatory protein fixJ
Authors:Kurashima-Ito, K, Kasai, Y, Hosono, K, Tamura, K, Oue, S, Isogai, M, Ito, Y, Nakamura, H, Shiro, Y.
Deposit date:2005-05-10
Release date:2006-05-02
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of the C-terminal transcriptional activator domain of FixJ from Sinorhizobium meliloti and its recognition of the fixK promoter
Biochemistry, 44, 2005
2JPC
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BU of 2jpc by Molmil
SSRB DNA Binding Protein
Descriptor: SsrB
Authors:Liao, X, Kenney, L, Sheng, W, Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2007-05-03
Release date:2007-07-03
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:SSRB DNA Binding Protein
To be Published
2RNJ
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NMR Structure of The S. Aureus VraR DNA Binding Domain
Descriptor: Response regulator protein vraR
Authors:Donaldson, L.W.
Deposit date:2008-01-09
Release date:2008-01-22
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The NMR Structure of the Staphylococcus aureus Response Regulator VraR DNA Binding Domain Reveals a Dynamic Relationship between It and Its Associated Receiver Domain
Biochemistry, 47, 2008
2KRF
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BU of 2krf by Molmil
NMR solution structure of the DNA binding domain of Competence protein A
Descriptor: Transcriptional regulatory protein comA
Authors:Hobbs, C.A, Bobay, B.G, Thompson, R.J, Perego, M, Cavanagh, J.
Deposit date:2009-12-16
Release date:2010-04-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR solution structure and DNA-binding model of the DNA-binding domain of competence protein A.
J.Mol.Biol., 398, 2010
3C57
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Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain Crystal Form II
Descriptor: TWO COMPONENT TRANSCRIPTIONAL REGULATORY PROTEIN DEVR
Authors:Wisedchaisri, G, Wu, M, Sherman, D.R, Hol, W.G.J.
Deposit date:2008-01-30
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of the response regulator DosR from Mycobacterium tuberculosis suggest a helix rearrangement mechanism for phosphorylation activation
J.Mol.Biol., 378, 2008
1JE8
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BU of 1je8 by Molmil
Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site
Descriptor: 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/Nitrite Response Regulator Protein NARL, SULFATE ION
Authors:Maris, A.E, Sawaya, M.R, Kaczor-Grzeskowiak, M, Jarvis, M.R, Bearson, S.M.D, Kopka, M.L, Schroder, I, Gunsalus, R.P, Dickerson, R.E.
Deposit date:2001-06-15
Release date:2002-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Dimerization allows DNA target site recognition by the NarL response regulator.
Nat.Struct.Biol., 9, 2002
3CLO
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BU of 3clo by Molmil
Crystal structure of putative transcriptional regulator containing a LuxR DNA binding domain (NP_811094.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.04 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, SODIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-03-19
Release date:2008-04-01
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of putative transcriptional regulator containing a LuxR DNA binding domain (NP_811094.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.04 A resolution
To be published
7VE5
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BU of 7ve5 by Molmil
C-terminal domain of VraR
Descriptor: DNA-binding response regulator, MAGNESIUM ION, R1-DNA
Authors:Kumar, J.V, Chen, C, Hsu, C.H.
Deposit date:2021-09-08
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into DNA binding domain of vancomycin-resistance-associated response regulator in complex with its promoter DNA from Staphylococcus aureus.
Protein Sci., 31, 2022
7VIM
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BU of 7vim by Molmil
The C-terminal DNA binding domain of EsrB from Edwardsiella piscicida
Descriptor: Protein EsrB
Authors:Liu, B, Reverter, D, Shao, S.
Deposit date:2021-09-27
Release date:2022-09-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The C-terminal DNA binding domain of EsrB from Edwardsiella piscicida
To Be Published
7X1K
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BU of 7x1k by Molmil
Crystal structure of the flagellar expression regulator DegU from Listeria monocytogenes
Descriptor: Chemotaxis protein CheY
Authors:Oh, H.B, Lee, S, Yoon, S.I.
Deposit date:2022-02-24
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural and biochemical analyses of the flagellar expression regulator DegU from Listeria monocytogenes.
Sci Rep, 12, 2022
1ZLK
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BU of 1zlk by Molmil
Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain-DNA Complex
Descriptor: 5'-D(*CP*GP*TP*GP*GP*CP*CP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*AP*CP*TP*TP*TP*AP*GP*TP*CP*CP*CP*CP*AP*AP*AP*GP*CP*GP*CP*GP*GP*GP*CP*CP*AP*T)-3', 5'-D(*GP*GP*CP*CP*CP*GP*CP*GP*CP*TP*TP*TP*GP*GP*GP*GP*AP*CP*TP*AP*AP*AP*GP*TP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*GP*GP*CP*CP*AP*CP*GP*AP*T)-3', Dormancy Survival Regulator
Authors:Wisedchaisri, G, Wu, M, Rice, A.E, Roberts, D.M, Sherman, D.R, Hol, W.G.J.
Deposit date:2005-05-06
Release date:2006-01-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency.
J.Mol.Biol., 354, 2005
1ZG5
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BU of 1zg5 by Molmil
NarL complexed to narG-89 promoter palindromic tail-to-tail DNA site
Descriptor: 5'-D(*CP*GP*TP*AP*CP*CP*CP*CP*TP*AP*TP*AP*GP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, SULFATE ION
Authors:Maris, A.E, Kaczor-Grzeskowiak, M, Ma, Z, Kopka, M.L, Gunsalus, R.P, Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1ZLJ
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BU of 1zlj by Molmil
Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain
Descriptor: Dormancy Survival Regulator
Authors:Wisedchaisri, G, Wu, M, Rice, A.E, Roberts, D.M, Sherman, D.R, Hol, W.G.J.
Deposit date:2005-05-06
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency.
J.Mol.Biol., 354, 2005
1ZG1
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BU of 1zg1 by Molmil
NarL complexed to nirB promoter non-palindromic tail-to-tail DNA site
Descriptor: 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*GP*GP*AP*GP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*CP*TP*CP*CP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, ...
Authors:Maris, A.E, Kaczor-Grzeskowiak, M, Ma, Z, Kopka, M.L, Gunsalus, R.P, Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
7DWM
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BU of 7dwm by Molmil
Crystal structure of the phage VqmA-DPO complex
Descriptor: 3,5-dimethylpyrazin-2-ol, Transcriptional regulator
Authors:Gu, Y, Yang, W.S.
Deposit date:2021-01-17
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Understanding the mechanism of asymmetric gene regulation determined by the VqmA of vibriophage.
Biochem.Biophys.Res.Commun., 558, 2021
7PK5
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BU of 7pk5 by Molmil
Phosphodiesterase PdeL (EAL domain of crystals comprising full-length protein)
Descriptor: Cyclic di-GMP phosphodiesterase PdeL
Authors:Fadel, J, Schirmer, T.
Deposit date:2021-08-25
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:Phosphodiesterase PdeL (EAL domain of crystals comprising full-length protein)
To Be Published
8A5R
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BU of 8a5r by Molmil
Crystal structure of light-activated DNA-binding protein EL222 from Erythrobacter litoralis crystallized and measured in dark.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Koval, T, Chaudhari, A, Fuertes, G, Andersson, I, Dohnalek, J.
Deposit date:2022-06-15
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:EL222 from Erythrobacter litoralis.
To Be Published
8A5S
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BU of 8a5s by Molmil
Crystal structure of light-activated DNA-binding protein EL222 from Erythrobacter litoralis crystallized in dark, measured illuminated.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Koval, T, Chaudhari, A, Fuertes, G, Andersson, I, Dohnalek, J.
Deposit date:2022-06-15
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:EL222 from Erythrobacter litoralis.
To Be Published
3SZT
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BU of 3szt by Molmil
Quorum Sensing Control Repressor, QscR, Bound to N-3-oxo-dodecanoyl-L-Homoserine Lactone
Descriptor: N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONE, Quorum-sensing control repressor, SODIUM ION
Authors:Churchill, M.E.A, Lintz, M.J.
Deposit date:2011-07-19
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of QscR, a Pseudomonas aeruginosa quorum sensing signal receptor.
Proc.Natl.Acad.Sci.USA, 108, 2011
3ULQ
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BU of 3ulq by Molmil
Crystal Structure of the Anti-Activator RapF Complexed with the Response Regulator ComA DNA Binding Domain
Descriptor: MANGANESE (II) ION, Response regulator aspartate phosphatase F, Transcriptional regulatory protein ComA
Authors:Baker, M.D, Neiditch, M.B.
Deposit date:2011-11-11
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of response regulator inhibition by a bacterial anti-activator protein.
Plos Biol., 9, 2011
2Q0O
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Crystal structure of an anti-activation complex in bacterial quorum sensing
Descriptor: 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE, Probable transcriptional activator protein traR, Probable transcriptional repressor traM
Authors:Chen, G, Jeffrey, P.D, Fuqua, C, Shi, Y, Chen, L.
Deposit date:2007-05-22
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for antiactivation in bacterial quorum sensing.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3KLN
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BU of 3kln by Molmil
Vibrio cholerae VpsT
Descriptor: Transcriptional regulator, LuxR family
Authors:Krasteva, P.V, Navarro, V.A.S, Sondermann, H.
Deposit date:2009-11-08
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.078 Å)
Cite:Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP.
Science, 327, 2010

 

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數據於2024-03-27公開中

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